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The map label for this gene is 88608745

Identifier: 88608745

GI number: 88608745

Start: 99201

End: 100451

Strand: Reverse

Name: 88608745

Synonym: NSE_0121

Alternate gene names: NA

Gene position: 100451-99201 (Counterclockwise)

Preceding gene: 88608134

Following gene: 88608018

Centisome position: 11.69

GC content: 41.09

Gene sequence:

>1251_bases
TTGTCTCTTTTTACATCTGTTATGAAGCAGAGATGGCTCTCTCTTGGTGTCCTTGCTTTGGGACTCTCGGGGATTTTCTC
CCTATTTGTAGTCCTACTGAGATTACCCTTCTTCATTGGTTTAGTACCAAATATTTTTGATGTTTCACTCGTTATACATG
TTACACTCGGCATCAACGCGTGGATGCTTGCTATCACAGCTGCTACCATAGCAGGAGAGGGGTATTTCCAAAAATTCAGT
CACAACTTATGTCTGCTAGGAGTAATTTTTATTTTTATTGCAGGCTTTATCCCGGAAACGCACGCGTTGAAAAATAACTA
CATCCCCTTCTTAAATAATTTACCTTATGTTCTAGGCACAGCGCTACTTTCATTTGGACTTTCCGTAAGCGCTATCAACA
CGCTGTGCAATAGGACAGCAGGAGAGTGCAAACGAATCACTGCACTAATTTTTTTAATCTCGCAACTATGTACTTATCTG
GCATACGCGAGGATGCCAAGTGGCATCACGTTATATGACTTTTATGAGTATCTCTTCTGGGGGGGCGGACACATACTGCA
GTTTGTGTTTTGTCAGACATTAATGCTAGTGTACGCAACACTCCTCGGCATAGGGACATCTGATAGGACCCTACGGGGAT
TATCTCTATTTAACTTACTTGCTGTTTTGCCAACTCCGGTATTATATTTCTTTTTCTCCCCTGATAGAGAAATCCTTATA
CGGGTTTTTACTTATCACATGCGTGTTTTAGGAAGTGTGGCACCAATGATTTTTATTTTTTACCTACTTTCTCTTCCAAA
AAAGAGAGTCGATTGGTCCAATATCGCTGCTTTCACTTTCTCAGCATGCCTCTTCATCTATGGTGGACTTCTAGGCTTTC
TTATCAGAGAGAGCAATGTCGTTATTCCAGCTCACTACCATGGTTCAATCATTGGAATAACTCTTGCTTTCATGGCATTC
GCTTACCATTTTACAGGAATATTATCTTTAAAACTTCCAATGTTGCAGCTCACAACATATAGCATTGGACAATTTGCACA
CATTACAGGGCTACTTCTCATGGGTGGATATGGTGCACTCAGAAAAAGCGCTGGAATGGTAGGAGGAAGTACCACGCTGT
TCAAGTCCATCTTCTTCTTCGGAGGCAGCTTGAGTATCTTATCCGGTGGACTGTTCGTAATTCTCCTTACATCGACTCTT
CTAAAGAATGAAAAAGGAAATGAGACTCTTAAGTCCAGAAACTCTTTATAG

Upstream 100 bases:

>100_bases
GTGAACAATACCCTTGTTCCCCAATCGGCCAAACTGGGCCTGTATCTTTTACTAAGGGAGATACCTTCCGTCTCACTAAT
TTCGATGCTATACACAGAGG

Downstream 100 bases:

>100_bases
TCCTGTGAGTTTTTTTATCCAAGATGCAAGCCACGATCTTCTAGATTCCACCTTTACTACAGAGCTTCCCTCTGTGACCG
TCTTTTCATTCGACTGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSLFTSVMKQRWLSLGVLALGLSGIFSLFVVLLRLPFFIGLVPNIFDVSLVIHVTLGINAWMLAITAATIAGEGYFQKFS
HNLCLLGVIFIFIAGFIPETHALKNNYIPFLNNLPYVLGTALLSFGLSVSAINTLCNRTAGECKRITALIFLISQLCTYL
AYARMPSGITLYDFYEYLFWGGGHILQFVFCQTLMLVYATLLGIGTSDRTLRGLSLFNLLAVLPTPVLYFFFSPDREILI
RVFTYHMRVLGSVAPMIFIFYLLSLPKKRVDWSNIAAFTFSACLFIYGGLLGFLIRESNVVIPAHYHGSIIGITLAFMAF
AYHFTGILSLKLPMLQLTTYSIGQFAHITGLLLMGGYGALRKSAGMVGGSTTLFKSIFFFGGSLSILSGGLFVILLTSTL
LKNEKGNETLKSRNSL

Sequences:

>Translated_416_residues
MSLFTSVMKQRWLSLGVLALGLSGIFSLFVVLLRLPFFIGLVPNIFDVSLVIHVTLGINAWMLAITAATIAGEGYFQKFS
HNLCLLGVIFIFIAGFIPETHALKNNYIPFLNNLPYVLGTALLSFGLSVSAINTLCNRTAGECKRITALIFLISQLCTYL
AYARMPSGITLYDFYEYLFWGGGHILQFVFCQTLMLVYATLLGIGTSDRTLRGLSLFNLLAVLPTPVLYFFFSPDREILI
RVFTYHMRVLGSVAPMIFIFYLLSLPKKRVDWSNIAAFTFSACLFIYGGLLGFLIRESNVVIPAHYHGSIIGITLAFMAF
AYHFTGILSLKLPMLQLTTYSIGQFAHITGLLLMGGYGALRKSAGMVGGSTTLFKSIFFFGGSLSILSGGLFVILLTSTL
LKNEKGNETLKSRNSL
>Mature_415_residues
SLFTSVMKQRWLSLGVLALGLSGIFSLFVVLLRLPFFIGLVPNIFDVSLVIHVTLGINAWMLAITAATIAGEGYFQKFSH
NLCLLGVIFIFIAGFIPETHALKNNYIPFLNNLPYVLGTALLSFGLSVSAINTLCNRTAGECKRITALIFLISQLCTYLA
YARMPSGITLYDFYEYLFWGGGHILQFVFCQTLMLVYATLLGIGTSDRTLRGLSLFNLLAVLPTPVLYFFFSPDREILIR
VFTYHMRVLGSVAPMIFIFYLLSLPKKRVDWSNIAAFTFSACLFIYGGLLGFLIRESNVVIPAHYHGSIIGITLAFMAFA
YHFTGILSLKLPMLQLTTYSIGQFAHITGLLLMGGYGALRKSAGMVGGSTTLFKSIFFFGGSLSILSGGLFVILLTSTLL
KNEKGNETLKSRNSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.aeolicus AQ_155 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: NA

Molecular weight: Translated: 45893; Mature: 45762

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFTSVMKQRWLSLGVLALGLSGIFSLFVVLLRLPFFIGLVPNIFDVSLVIHVTLGINA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEHHCHHH
WMLAITAATIAGEGYFQKFSHNLCLLGVIFIFIAGFIPETHALKNNYIPFLNNLPYVLGT
HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHCCCHHHHHH
ALLSFGLSVSAINTLCNRTAGECKRITALIFLISQLCTYLAYARMPSGITLYDFYEYLFW
HHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GGGHILQFVFCQTLMLVYATLLGIGTSDRTLRGLSLFNLLAVLPTPVLYFFFSPDREILI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHH
RVFTYHMRVLGSVAPMIFIFYLLSLPKKRVDWSNIAAFTFSACLFIYGGLLGFLIRESNV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VIPAHYHGSIIGITLAFMAFAYHFTGILSLKLPMLQLTTYSIGQFAHITGLLLMGGYGAL
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RKSAGMVGGSTTLFKSIFFFGGSLSILSGGLFVILLTSTLLKNEKGNETLKSRNSL
HHHCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure 
SLFTSVMKQRWLSLGVLALGLSGIFSLFVVLLRLPFFIGLVPNIFDVSLVIHVTLGINA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEHHCHHH
WMLAITAATIAGEGYFQKFSHNLCLLGVIFIFIAGFIPETHALKNNYIPFLNNLPYVLGT
HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHCCCHHHHHH
ALLSFGLSVSAINTLCNRTAGECKRITALIFLISQLCTYLAYARMPSGITLYDFYEYLFW
HHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GGGHILQFVFCQTLMLVYATLLGIGTSDRTLRGLSLFNLLAVLPTPVLYFFFSPDREILI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHH
RVFTYHMRVLGSVAPMIFIFYLLSLPKKRVDWSNIAAFTFSACLFIYGGLLGFLIRESNV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VIPAHYHGSIIGITLAFMAFAYHFTGILSLKLPMLQLTTYSIGQFAHITGLLLMGGYGAL
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RKSAGMVGGSTTLFKSIFFFGGSLSILSGGLFVILLTSTLLKNEKGNETLKSRNSL
HHHCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]