Click here to switch to the map view.

The map label for this gene is pqqC

Identifier: 88608653

GI number: 88608653

Start: 406532

End: 407230

Strand: Reverse

Name: pqqC

Synonym: NSE_0493

Alternate gene names: NA

Gene position: 407230-406532 (Counterclockwise)

Preceding gene: 88608327

Following gene: 88608682

Centisome position: 47.41

GC content: 39.48

Gene sequence:

>699_bases
TTGTGTTTTACTTCTGCTTGTACTTTTTTCCGTCTTCCAATGTTTGCAAGAGAACTAGAACCTAAATCCCTCCTTAGACA
CTGCTTTTATAAAGCTTGGGAGAGAGGTGAATTATCTAAAAGAGATCTACAGGAGTACGCTTGCCAGTACTTTAACCACG
TCAATGAAACACCTAGGTACCTTAGTACTCTTCATTCAAAATGTTCGGATATAAAGACCAGGCAGGTGTTACTTGATAAC
TTAATTGATGAAGAAAAGGGAGAAGAAAATCACCCAAAGTTGTGGTTAGATTTTTGTTCCTTCATCGGACTGGAGAGCGA
GAAAGCCAAAAATGCAAAGTTGCTTGAAACAACCAGGGACTTAAGTAACACATTCTTTAGATTATCAAATAGCTCTGTAG
CTGAAGGTATAGGCGCACTTTATGCATATGAAAGACAGATTCCTGAAATAGCACGTGTAAAGATAGCCAGTCTGAAGAAA
TTCCATTCTGTGAATGATGAAAAGGCGCTAAAGTTCTTTTCCGTGCATGAAGAAGCCGACAAGTGGCACTCTCAAGAATG
TGAAGATCTTATCAAAGAAATGAACGAACACGATAGAGAGAAAGCAAGAAAAGGAGCTCTTGAGCTTGCTTCCGCTTTGT
GGGGATTTCTAGATGGAATGGAAGAAATCAGGTTAAAAGGTGGACATCTGAACGTGTGA

Upstream 100 bases:

>100_bases
AAGGCTTCATGCTATAGAATGCAGGAATTTATCCAGCTATACATGGATGACTGTTAATTCATTTGCTGATTATAAGTAAG
CACTTGAAAAAAGTTCAGCG

Downstream 100 bases:

>100_bases
CTTTTTAGTCCCGTTCGTCTGGAAAGGCGTCCTGTTATGTTTGAATTTGCCAGAGTGCTCTTCGCTTTTCCCGAGGTGAG
TGGCTGTCTGTTCTTGCTAT

Product: coenzyme PQQ synthesis protein C

Products: NA

Alternate protein names: Chlamydia protein associating with death domains; CADD [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MCFTSACTFFRLPMFARELEPKSLLRHCFYKAWERGELSKRDLQEYACQYFNHVNETPRYLSTLHSKCSDIKTRQVLLDN
LIDEEKGEENHPKLWLDFCSFIGLESEKAKNAKLLETTRDLSNTFFRLSNSSVAEGIGALYAYERQIPEIARVKIASLKK
FHSVNDEKALKFFSVHEEADKWHSQECEDLIKEMNEHDREKARKGALELASALWGFLDGMEEIRLKGGHLNV

Sequences:

>Translated_232_residues
MCFTSACTFFRLPMFARELEPKSLLRHCFYKAWERGELSKRDLQEYACQYFNHVNETPRYLSTLHSKCSDIKTRQVLLDN
LIDEEKGEENHPKLWLDFCSFIGLESEKAKNAKLLETTRDLSNTFFRLSNSSVAEGIGALYAYERQIPEIARVKIASLKK
FHSVNDEKALKFFSVHEEADKWHSQECEDLIKEMNEHDREKARKGALELASALWGFLDGMEEIRLKGGHLNV
>Mature_232_residues
MCFTSACTFFRLPMFARELEPKSLLRHCFYKAWERGELSKRDLQEYACQYFNHVNETPRYLSTLHSKCSDIKTRQVLLDN
LIDEEKGEENHPKLWLDFCSFIGLESEKAKNAKLLETTRDLSNTFFRLSNSSVAEGIGALYAYERQIPEIARVKIASLKK
FHSVNDEKALKFFSVHEEADKWHSQECEDLIKEMNEHDREKARKGALELASALWGFLDGMEEIRLKGGHLNV

Specific function: Chlamydia specific toxin inducing apoptosis in mammalian cell lines [H]

COG id: COG5424

COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Gene ontology:

Cell location: Secreted. Note=Secreted into the host cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 27002; Mature: 27002

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFTSACTFFRLPMFARELEPKSLLRHCFYKAWERGELSKRDLQEYACQYFNHVNETPRY
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHH
LSTLHSKCSDIKTRQVLLDNLIDEEKGEENHPKLWLDFCSFIGLESEKAKNAKLLETTRD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHCCHHHHHHHHH
LSNTFFRLSNSSVAEGIGALYAYERQIPEIARVKIASLKKFHSVNDEKALKFFSVHEEAD
HHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KWHSQECEDLIKEMNEHDREKARKGALELASALWGFLDGMEEIRLKGGHLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MCFTSACTFFRLPMFARELEPKSLLRHCFYKAWERGELSKRDLQEYACQYFNHVNETPRY
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHH
LSTLHSKCSDIKTRQVLLDNLIDEEKGEENHPKLWLDFCSFIGLESEKAKNAKLLETTRD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHCCHHHHHHHHH
LSNTFFRLSNSSVAEGIGALYAYERQIPEIARVKIASLKKFHSVNDEKALKFFSVHEEAD
HHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KWHSQECEDLIKEMNEHDREKARKGALELASALWGFLDGMEEIRLKGGHLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]