Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 88608628

GI number: 88608628

Start: 824044

End: 824565

Strand: Direct

Name: yceJ [H]

Synonym: NSE_0932

Alternate gene names: 88608628

Gene position: 824044-824565 (Clockwise)

Preceding gene: 88608025

Following gene: 88608651

Centisome position: 95.93

GC content: 39.85

Gene sequence:

>522_bases
ATGCCTAGTCCTGAAAAGTATAATCTAACTCTAAGGATCCTGCATTGGATCTTGGCGTTTGCGGTGATCGCTATGCTCGT
AAGCGGATTCACTATGAGCAGCTATCTGACTCCACCTTTGAAGTTCATTGTTTACGGAAAGCACAAGGCGATTGGTATGA
CGGTTGGTGTTCTGATGATCATAAGGCTAGCAATTCGCGTGTGTTTTAACATCCCAGAAACACAATTTTCCAGGTTGGAA
AATATTGTGTTGGGTGTTGTGCATTCTTTGCTTTATGTTTTGACAATTGGAGCTGTTTTCTCAGGATACTTAATGTCTTG
CAGTGCCGGCAAACCTGTTTCCTGGTTTGGAATTTTCGAATTCCCATCGTTGTTTCAACAAAACCCAGATATCGCAAAAA
TAGCACATGATGCACATCAGGTCATCATATATCTTCTCGCTTGCCTGGTTGTGCTTCATATTTTAGCAACCCTGAAGCAT
TTAATTATTGATAAGGAGAATATTTTTAAACGAATATTTTAG

Upstream 100 bases:

>100_bases
CAGGAACGAAAATAGAGGAGAGGAGTACAACCCAGTACTCATTGGACAATGCCACAGAATTATTTTACCATAGCGTGATC
TGATTCCGAGTTTACTGGAT

Downstream 100 bases:

>100_bases
CGTGGCTCCAGCACCTTATGCATGTTATGAGGTCTTTTGTACGTTGGGCTTTTTCTTGATTGATTTGTTTTTTAGGACAC
TGAGGCAGAAGTCTCTTCTT

Product: cytochrome b561 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPSPEKYNLTLRILHWILAFAVIAMLVSGFTMSSYLTPPLKFIVYGKHKAIGMTVGVLMIIRLAIRVCFNIPETQFSRLE
NIVLGVVHSLLYVLTIGAVFSGYLMSCSAGKPVSWFGIFEFPSLFQQNPDIAKIAHDAHQVIIYLLACLVVLHILATLKH
LIIDKENIFKRIF

Sequences:

>Translated_173_residues
MPSPEKYNLTLRILHWILAFAVIAMLVSGFTMSSYLTPPLKFIVYGKHKAIGMTVGVLMIIRLAIRVCFNIPETQFSRLE
NIVLGVVHSLLYVLTIGAVFSGYLMSCSAGKPVSWFGIFEFPSLFQQNPDIAKIAHDAHQVIIYLLACLVVLHILATLKH
LIIDKENIFKRIF
>Mature_172_residues
PSPEKYNLTLRILHWILAFAVIAMLVSGFTMSSYLTPPLKFIVYGKHKAIGMTVGVLMIIRLAIRVCFNIPETQFSRLEN
IVLGVVHSLLYVLTIGAVFSGYLMSCSAGKPVSWFGIFEFPSLFQQNPDIAKIAHDAHQVIIYLLACLVVLHILATLKHL
IIDKENIFKRIF

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=178, Percent_Identity=29.7752808988764, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 19476; Mature: 19345

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPEKYNLTLRILHWILAFAVIAMLVSGFTMSSYLTPPLKFIVYGKHKAIGMTVGVLMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHEEECCCHHHHHHHHHHHH
IRLAIRVCFNIPETQFSRLENIVLGVVHSLLYVLTIGAVFSGYLMSCSAGKPVSWFGIFE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHH
FPSLFQQNPDIAKIAHDAHQVIIYLLACLVVLHILATLKHLIIDKENIFKRIF
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
PSPEKYNLTLRILHWILAFAVIAMLVSGFTMSSYLTPPLKFIVYGKHKAIGMTVGVLMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHEEECCCHHHHHHHHHHHH
IRLAIRVCFNIPETQFSRLENIVLGVVHSLLYVLTIGAVFSGYLMSCSAGKPVSWFGIFE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHH
FPSLFQQNPDIAKIAHDAHQVIIYLLACLVVLHILATLKHLIIDKENIFKRIF
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]