Click here to switch to the map view.

The map label for this gene is 88608626

Identifier: 88608626

GI number: 88608626

Start: 41241

End: 43679

Strand: Reverse

Name: 88608626

Synonym: NSE_0051

Alternate gene names: NA

Gene position: 43679-41241 (Counterclockwise)

Preceding gene: 161511033

Following gene: 88608506

Centisome position: 5.08

GC content: 41.57

Gene sequence:

>2439_bases
ATGCAAAAATTTAGTATGCAGAAATTGAAGAAGAAACTCGCTACATTCGTTCCGATAAACCGAAGCACTATAAAGTCTAA
TACAACTGCAAGGAAGATACCAAAAGGAAAACCAGCGAAGAAAATTGTCCAACAAAACTCTGGTACTGTTGAAAAAATCA
TTACACAAAAGTCTCACATTGCTGCAGCCAAATTACCAAATCAAATACCAGAAGAGAAATTCGTTACACCAAAACTAGAG
ACAACAGCATCCGCAACACCTCTCCGAGAGGAATATGAGAAACGCCCTTTACCCGGGATCCCGAATGAATATGGGAACGA
AGATGCAATCCCTTACATTGATGAGGAGATGAGCACATCGGACTTGGGTATTGGTATATACGATGAAATTTACGAAACTG
CATCCATAGGCAATGAAAGCCATTCCATAAGAAGCAGTGTTGGTGATTCAGGAATTGACAACACTTCAGTACCTAATTCA
GCAATTTCGAATATAGATACAAAAAATGCCTCTGCTCATGAAATAGATTCAGCATCCGAAACCGGTAGTATCAGTACTGA
TGGAATCGCTGCTTATATACTTTCATCATCGTTTAAAGCATCGAAAGGTACCCGCGATTCACTTCTTTCAATAAAGCAAG
TCACAGATGAGCAAAACGTACAGATAGGTCAAACGTCTGAGCTGGAACACACAACTGAACCACAAAAAAGTGATCGAGAA
AGTTTTGCTTCAACAGATAGCGGGAACACCATCAGAAATGAAGCCATAGTAAAACGTCCACCTCTACCAGAGATTTTTGA
CGCAATATACAACTCAAAATGGATCAAAGGTGATAAGAGCATCGATCCTATAAACACAAACAGCATCTCTATAAAGGAAC
AAAACAAAGACTCTGCAGAAAGCGAAATTACTAGCTCACAAAGTCAGAATTCTCTTCTTTCAGGCAATGCACAAAAAGAG
GCTCACATACAGGAATCGCATACCTCCTCCACATCCGTAAATGAGGAACAAGTTGGGAACATACCTTCAGGAGTAAAAGC
ATTTACACATACCTCTAGGAACAAACATGAAAATAAAGAAAGTGAACCAATCTACCTAGACCCGTGGGACCTCAAACCTA
TACCAGAACTGGATGAGCATCAACACACTGGTTCTATGAGCAGTTCACCTAAAAGAACAGCAAATGAACCAAGTTCTTCC
ATATATCAAGAAGAAGAAATTTACGAAAGCCTTGACGATATAGAAGCTTACTTAGCATCACCCACCCACTCCTTTGAGCA
GCTTGCTGAAAAAGCACACCCGGCACTTCGCGCGCATAGGGAAAAAATTGATGACAAAAGCGAACATGTGTATGCCCAAG
TAAAAAGAAATAACAACGTAAGAAGTGACCTTCTTAATTTGGAAGATGGCGCAATAACCGCAGATATATTCAGTGTAACA
ATACCTAAGTTGCATCTCAAGGAACACACAGTTGATGTTTCTCTTCCGAAAACGCAGCAGAAAACGATCACAGAAACTCC
CATTAGTACCAGGAAGGCACTGTCTCAAGGAGAGGAAACTCATAAGACAGTTCCGAATAAATCATGGTTGAGACGTATAC
TGGACAGAATCAAAGAAATATTCTTGCAAGGGTATGCTGCTTTACGTTCTATTTTCACTCAGTCTACCAAAAATAAGGAA
AAATCCTTCGATCAGAGTCCTTCTTCGCACAGCAAAAATGGAGAACTCAGCAAGATCGAGCAAACACTTTCCGAGAGACA
TCCGCTCAATAAGAAGGAAACTGGAGCACTTAACGCTATCAAGGAAGCACTCTCTCAGAAACACGCTCTAGTGCTAGGTA
AGGCTGGAGAACTTGGCAAAATCAAGGAAACACTCTCTGAGAAACATGCTCTAGTGCTGGGTAAGGCCGGAGAACTTGGC
AAAGTTAAGGAAGCACTCTCTCAGAAACACGCTCTAGTGCTAGGTAAGGCTGGAGAACTTGGCAAAATCAAGGAAACACT
CTCTGAGAAACACGCTCTAGTGCTGCGTAAGGCCGGAGAACTTGGCAAAGTTAAGGAAGCACTCTCTGAGAAACATGCCC
TAGTGCTAGGTAAGGCCAGGGAACTCGGTAAAGTTAAGGAAGCACTCTCTCAGAAAGTTCCATTGATACAAGAGGACACA
ATGAGACTTAGTAAAATCAGAGAAGCCCTTTCTGAAAAAGGCTTCCGCGTACATCACCTGAACTATGAACAAAACAAAGC
GCATGATAATCCCCAAAAAAACAGATATGCATTTAGCACTGGTACAGAGCATGATAAAATCAAGTCTATTCTGACTCGAG
AACCTGAGATAACTGCTAAACTCAGGGAAAGCGGAATGAAGGAGGAACAAAGCAAAACCTGTGTCCCATCCTTGGGATGC
AATTCGCATACGAGAACTCAGGCTTCAAGGGTAGTTTGA

Upstream 100 bases:

>100_bases
GAGACTTTAGTTTGAATTTTCATTTAAGAATAACGAATTAAAAGAATTTGTTAAAGATAATATATCAATATTAGAATATA
AGTCACTTACTCAACATAGT

Downstream 100 bases:

>100_bases
ATGTGATTAGGGCCTCTGGAAAGGGGCCTTATAATCTGAAAATTATAGTCTTTCCCAAAACGTAGAAAATTTGTTAATTC
GCGTGGAAACAGGGTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MQKFSMQKLKKKLATFVPINRSTIKSNTTARKIPKGKPAKKIVQQNSGTVEKIITQKSHIAAAKLPNQIPEEKFVTPKLE
TTASATPLREEYEKRPLPGIPNEYGNEDAIPYIDEEMSTSDLGIGIYDEIYETASIGNESHSIRSSVGDSGIDNTSVPNS
AISNIDTKNASAHEIDSASETGSISTDGIAAYILSSSFKASKGTRDSLLSIKQVTDEQNVQIGQTSELEHTTEPQKSDRE
SFASTDSGNTIRNEAIVKRPPLPEIFDAIYNSKWIKGDKSIDPINTNSISIKEQNKDSAESEITSSQSQNSLLSGNAQKE
AHIQESHTSSTSVNEEQVGNIPSGVKAFTHTSRNKHENKESEPIYLDPWDLKPIPELDEHQHTGSMSSSPKRTANEPSSS
IYQEEEIYESLDDIEAYLASPTHSFEQLAEKAHPALRAHREKIDDKSEHVYAQVKRNNNVRSDLLNLEDGAITADIFSVT
IPKLHLKEHTVDVSLPKTQQKTITETPISTRKALSQGEETHKTVPNKSWLRRILDRIKEIFLQGYAALRSIFTQSTKNKE
KSFDQSPSSHSKNGELSKIEQTLSERHPLNKKETGALNAIKEALSQKHALVLGKAGELGKIKETLSEKHALVLGKAGELG
KVKEALSQKHALVLGKAGELGKIKETLSEKHALVLRKAGELGKVKEALSEKHALVLGKARELGKVKEALSQKVPLIQEDT
MRLSKIREALSEKGFRVHHLNYEQNKAHDNPQKNRYAFSTGTEHDKIKSILTREPEITAKLRESGMKEEQSKTCVPSLGC
NSHTRTQASRVV

Sequences:

>Translated_812_residues
MQKFSMQKLKKKLATFVPINRSTIKSNTTARKIPKGKPAKKIVQQNSGTVEKIITQKSHIAAAKLPNQIPEEKFVTPKLE
TTASATPLREEYEKRPLPGIPNEYGNEDAIPYIDEEMSTSDLGIGIYDEIYETASIGNESHSIRSSVGDSGIDNTSVPNS
AISNIDTKNASAHEIDSASETGSISTDGIAAYILSSSFKASKGTRDSLLSIKQVTDEQNVQIGQTSELEHTTEPQKSDRE
SFASTDSGNTIRNEAIVKRPPLPEIFDAIYNSKWIKGDKSIDPINTNSISIKEQNKDSAESEITSSQSQNSLLSGNAQKE
AHIQESHTSSTSVNEEQVGNIPSGVKAFTHTSRNKHENKESEPIYLDPWDLKPIPELDEHQHTGSMSSSPKRTANEPSSS
IYQEEEIYESLDDIEAYLASPTHSFEQLAEKAHPALRAHREKIDDKSEHVYAQVKRNNNVRSDLLNLEDGAITADIFSVT
IPKLHLKEHTVDVSLPKTQQKTITETPISTRKALSQGEETHKTVPNKSWLRRILDRIKEIFLQGYAALRSIFTQSTKNKE
KSFDQSPSSHSKNGELSKIEQTLSERHPLNKKETGALNAIKEALSQKHALVLGKAGELGKIKETLSEKHALVLGKAGELG
KVKEALSQKHALVLGKAGELGKIKETLSEKHALVLRKAGELGKVKEALSEKHALVLGKARELGKVKEALSQKVPLIQEDT
MRLSKIREALSEKGFRVHHLNYEQNKAHDNPQKNRYAFSTGTEHDKIKSILTREPEITAKLRESGMKEEQSKTCVPSLGC
NSHTRTQASRVV
>Mature_812_residues
MQKFSMQKLKKKLATFVPINRSTIKSNTTARKIPKGKPAKKIVQQNSGTVEKIITQKSHIAAAKLPNQIPEEKFVTPKLE
TTASATPLREEYEKRPLPGIPNEYGNEDAIPYIDEEMSTSDLGIGIYDEIYETASIGNESHSIRSSVGDSGIDNTSVPNS
AISNIDTKNASAHEIDSASETGSISTDGIAAYILSSSFKASKGTRDSLLSIKQVTDEQNVQIGQTSELEHTTEPQKSDRE
SFASTDSGNTIRNEAIVKRPPLPEIFDAIYNSKWIKGDKSIDPINTNSISIKEQNKDSAESEITSSQSQNSLLSGNAQKE
AHIQESHTSSTSVNEEQVGNIPSGVKAFTHTSRNKHENKESEPIYLDPWDLKPIPELDEHQHTGSMSSSPKRTANEPSSS
IYQEEEIYESLDDIEAYLASPTHSFEQLAEKAHPALRAHREKIDDKSEHVYAQVKRNNNVRSDLLNLEDGAITADIFSVT
IPKLHLKEHTVDVSLPKTQQKTITETPISTRKALSQGEETHKTVPNKSWLRRILDRIKEIFLQGYAALRSIFTQSTKNKE
KSFDQSPSSHSKNGELSKIEQTLSERHPLNKKETGALNAIKEALSQKHALVLGKAGELGKIKETLSEKHALVLGKAGELG
KVKEALSQKHALVLGKAGELGKIKETLSEKHALVLRKAGELGKVKEALSEKHALVLGKARELGKVKEALSQKVPLIQEDT
MRLSKIREALSEKGFRVHHLNYEQNKAHDNPQKNRYAFSTGTEHDKIKSILTREPEITAKLRESGMKEEQSKTCVPSLGC
NSHTRTQASRVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89803; Mature: 89803

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFSMQKLKKKLATFVPINRSTIKSNTTARKIPKGKPAKKIVQQNSGTVEKIITQKSHI
CCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
AAAKLPNQIPEEKFVTPKLETTASATPLREEYEKRPLPGIPNEYGNEDAIPYIDEEMSTS
HHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DLGIGIYDEIYETASIGNESHSIRSSVGDSGIDNTSVPNSAISNIDTKNASAHEIDSASE
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCCC
TGSISTDGIAAYILSSSFKASKGTRDSLLSIKQVTDEQNVQIGQTSELEHTTEPQKSDRE
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
SFASTDSGNTIRNEAIVKRPPLPEIFDAIYNSKWIKGDKSIDPINTNSISIKEQNKDSAE
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHH
SEITSSQSQNSLLSGNAQKEAHIQESHTSSTSVNEEQVGNIPSGVKAFTHTSRNKHENKE
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCC
SEPIYLDPWDLKPIPELDEHQHTGSMSSSPKRTANEPSSSIYQEEEIYESLDDIEAYLAS
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PTHSFEQLAEKAHPALRAHREKIDDKSEHVYAQVKRNNNVRSDLLNLEDGAITADIFSVT
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCHHHHHHCCCCCCEEHHHHHHH
IPKLHLKEHTVDVSLPKTQQKTITETPISTRKALSQGEETHKTVPNKSWLRRILDRIKEI
CCCEEHHHCEEEECCCCCCCHHHHCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHH
FLQGYAALRSIFTQSTKNKEKSFDQSPSSHSKNGELSKIEQTLSERHPLNKKETGALNAI
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
KEALSQKHALVLGKAGELGKIKETLSEKHALVLGKAGELGKVKEALSQKHALVLGKAGEL
HHHHHHCCEEEEECCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHEEEEECCCCH
GKIKETLSEKHALVLRKAGELGKVKEALSEKHALVLGKARELGKVKEALSQKVPLIQEDT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MRLSKIREALSEKGFRVHHLNYEQNKAHDNPQKNRYAFSTGTEHDKIKSILTREPEITAK
HHHHHHHHHHHHCCCEEEECCCHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHH
LRESGMKEEQSKTCVPSLGCNSHTRTQASRVV
HHHCCCCHHHHCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MQKFSMQKLKKKLATFVPINRSTIKSNTTARKIPKGKPAKKIVQQNSGTVEKIITQKSHI
CCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
AAAKLPNQIPEEKFVTPKLETTASATPLREEYEKRPLPGIPNEYGNEDAIPYIDEEMSTS
HHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DLGIGIYDEIYETASIGNESHSIRSSVGDSGIDNTSVPNSAISNIDTKNASAHEIDSASE
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCCC
TGSISTDGIAAYILSSSFKASKGTRDSLLSIKQVTDEQNVQIGQTSELEHTTEPQKSDRE
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
SFASTDSGNTIRNEAIVKRPPLPEIFDAIYNSKWIKGDKSIDPINTNSISIKEQNKDSAE
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHH
SEITSSQSQNSLLSGNAQKEAHIQESHTSSTSVNEEQVGNIPSGVKAFTHTSRNKHENKE
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCC
SEPIYLDPWDLKPIPELDEHQHTGSMSSSPKRTANEPSSSIYQEEEIYESLDDIEAYLAS
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PTHSFEQLAEKAHPALRAHREKIDDKSEHVYAQVKRNNNVRSDLLNLEDGAITADIFSVT
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCHHHHHHCCCCCCEEHHHHHHH
IPKLHLKEHTVDVSLPKTQQKTITETPISTRKALSQGEETHKTVPNKSWLRRILDRIKEI
CCCEEHHHCEEEECCCCCCCHHHHCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHH
FLQGYAALRSIFTQSTKNKEKSFDQSPSSHSKNGELSKIEQTLSERHPLNKKETGALNAI
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
KEALSQKHALVLGKAGELGKIKETLSEKHALVLGKAGELGKVKEALSQKHALVLGKAGEL
HHHHHHCCEEEEECCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHEEEEECCCCH
GKIKETLSEKHALVLRKAGELGKVKEALSEKHALVLGKARELGKVKEALSQKVPLIQEDT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MRLSKIREALSEKGFRVHHLNYEQNKAHDNPQKNRYAFSTGTEHDKIKSILTREPEITAK
HHHHHHHHHHHHCCCEEEECCCHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHH
LRESGMKEEQSKTCVPSLGCNSHTRTQASRVV
HHHCCCCHHHHCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA