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The map label for this gene is ybhL [C]

Identifier: 88608506

GI number: 88608506

Start: 40371

End: 41126

Strand: Reverse

Name: ybhL [C]

Synonym: NSE_0050

Alternate gene names: 88608506

Gene position: 41126-40371 (Counterclockwise)

Preceding gene: 88608626

Following gene: 88608798

Centisome position: 4.79

GC content: 41.53

Gene sequence:

>756_bases
TTGTATAATGGATGTTTGTTTGTTCGTAGCTATTTTGCTTATATGAGTTTTATCAACCGTTATTCTTCTACTTCAACAGA
TTCTGCTTATAGAAACGAAGGGCTGAGAATGTATATGGTGAAGGTCTTCAACTATATGGCTGCGGCTCTTGGGATAACTG
GTCTAACTGCTTTCTTTGTTGCAAGCTCTCCGGCTATGCTCTCCTTGTTGTATCAAACACCACTCCAGTGGGTCGTGATG
TTTGCCCCTGTAGTGTTTGTTATAGTCTTTAGTACGAGGATTTCAGGTATGACCTCCGAAAGAGCGAAAGTTTTGTTCTG
GTGCTTCTCGGTGCTTATGGGACTTTCTCTATCTTGGGTGTTCATTGCTTATACTGGCGCTAGCATAGCGAGGGTCTTTT
TTATTGCAGCGACGATGTTTGGAGCAATGGCAATATACGGGAATAATACTAGGACAGATTTGACGGGAATGGGCTCTTTT
CTTACGATGGGAGTCGTGGGTATTCTGATTGCTGCTTTGGTGAATGTCTTTCTTGCTAGTCCAGCTATTTATTTCGCTGT
GTCCGCGCTTGGTGTTGTGATATTTACTGGTCTTACCGCTTATGATGTACAGCGCATTAGGGATTTTTATTATTTCTCTG
TCAATGCAGATGAAGAGACACTTTCGAAGATCGCTGTAGTTGGTGCACTTACACTATACTTCGATTTTATTAATATTTTT
ATTAGCTTACTAAACCTCATGGGTGAGCGGAAGTAG

Upstream 100 bases:

>100_bases
TCTGGAAAGGGGCCTTATAATCTGAAAATTATAGTCTTTCCCAAAACGTAGAAAATTTGTTAATTCGCGTGGAAACAGGG
TATAATAATGGAGCTAACTG

Downstream 100 bases:

>100_bases
AGGTGGTCGCTGGGTCCTTGCGAGAGTCTTAGCTGAGTTCTCTTGCAAGGCATTCAGGTCGTTCTTTTTTGTTTTAATGG
CCTTGCTAGGCTGTGAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MYNGCLFVRSYFAYMSFINRYSSTSTDSAYRNEGLRMYMVKVFNYMAAALGITGLTAFFVASSPAMLSLLYQTPLQWVVM
FAPVVFVIVFSTRISGMTSERAKVLFWCFSVLMGLSLSWVFIAYTGASIARVFFIAATMFGAMAIYGNNTRTDLTGMGSF
LTMGVVGILIAALVNVFLASPAIYFAVSALGVVIFTGLTAYDVQRIRDFYYFSVNADEETLSKIAVVGALTLYFDFINIF
ISLLNLMGERK

Sequences:

>Translated_251_residues
MYNGCLFVRSYFAYMSFINRYSSTSTDSAYRNEGLRMYMVKVFNYMAAALGITGLTAFFVASSPAMLSLLYQTPLQWVVM
FAPVVFVIVFSTRISGMTSERAKVLFWCFSVLMGLSLSWVFIAYTGASIARVFFIAATMFGAMAIYGNNTRTDLTGMGSF
LTMGVVGILIAALVNVFLASPAIYFAVSALGVVIFTGLTAYDVQRIRDFYYFSVNADEETLSKIAVVGALTLYFDFINIF
ISLLNLMGERK
>Mature_251_residues
MYNGCLFVRSYFAYMSFINRYSSTSTDSAYRNEGLRMYMVKVFNYMAAALGITGLTAFFVASSPAMLSLLYQTPLQWVVM
FAPVVFVIVFSTRISGMTSERAKVLFWCFSVLMGLSLSWVFIAYTGASIARVFFIAATMFGAMAIYGNNTRTDLTGMGSF
LTMGVVGILIAALVNVFLASPAIYFAVSALGVVIFTGLTAYDVQRIRDFYYFSVNADEETLSKIAVVGALTLYFDFINIF
ISLLNLMGERK

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=219, Percent_Identity=41.5525114155251, Blast_Score=168, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 27835; Mature: 27835

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]