| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is 88608482
Identifier: 88608482
GI number: 88608482
Start: 812789
End: 814144
Strand: Reverse
Name: 88608482
Synonym: NSE_0916
Alternate gene names: NA
Gene position: 814144-812789 (Counterclockwise)
Preceding gene: 88608789
Following gene: 88608487
Centisome position: 94.78
GC content: 40.86
Gene sequence:
>1356_bases ATGGAAGAGTATGAAAAGTTAGAGAAAATATTCGCAAGAATTGACAGCCTGCAAAAAACTTTATGTTTTCTTGATTTTGA TGCAAGGCTCCATAGTGAATTCGCGAATGAAAAATTGCTCCAGGTAATCACCCTGAAAGAAATCATTCACGATGTTGCAA CAAGTGACGAGCTGTATTTTCTGATTGAGCAGGCAAAGCTTAAGGTCAAGGACTTGAATGATTGGCAGAGAGTGAATTTT GGGTTTATGCAGGATTTCTGCACCAGGAGAAGGGGATTACCGTTTGATGTTGTGAAAAGCTTCACAGAGGCCTCGTTTAC TTGTAGGTCTGCTTATGCAGCAGCAGGAAAGGCAAGGGACTTTTCTCTTGTAAAGGAGGAGTTCAAAAGACTTATTGAAG TGGTTGCACAAATAGCAGCTCTCTATGCAAAGGATTCTGGTCTGGATAAATACTCAGCTTTGTTGAGAGCCTATCAGATC GATCCAGAACACCTTGAACAGCTTTGTATAGGTGTGAGTCCATTGTTGAAAGCAAAAGTCCGAGGTGTAGGAGAGATTGC CTTGAATAAATCTCAGGAAAAAGGAGGCGCTAAGAACAGTCATAAGCGCGTGGTCGAGAAGTTTTTTCCAAAGAATGTGG TTAGGGTTTTTTACTCGGATCATTTTTACCTATCGGGCGGGGAAAATGAGCTCAAGTTGATCATACAAAACGGTGGGAGT GCATTCTTCCCTACATTGTTGTTTCTCTTAGGGCAGGGACTGTATATAAGGAATCTTCCATACGATAAGTGGAGAACACA GCCAATTTGCAATCCGACCAGTATCTCTATGTACGCGGTTCAGGGTTTTCTATTTTCTCATTTTCTTTTTGAAGAGAAGA ACTTTGCTCAATTTCTCGGTGTAGAGGAGAAATCTGAGTATTCGAGCTCAATCATGGGTGCAAACAAGTTCGTTGCTCTT ACCCACTTGATGATACTGTTCTCAATTGAGAAGTCGCTGATAAACGGTGAAGTGTCTGTTGATGATGTTGAGAAGCTTTT TGTTGAGGATCTCTCGTATTATTTTGGTGCAAACGACCCACAAGTAAGTATTCTTGATAATCATCATTGGTTTTTTGGTG AATTTTGTTATTATCCCTCTTACTTAAAGGGCATGATTGCATCTGGACAGATATTCCACATATTGAAGTCTGAATTTCCT GGGTTAAGAGAAGGAAAATCATTAATAAGAAAACTAGTTGCGTGGTTGGGTGCTAATGTGTATACTAAGGGGGCGCGCTG TTCCATGGACGAGTTAATCACAAGGCTTACTGGTGAGCCGCTCGACTGCAGATTTTTTAAGAAGTTTGACCAGTAA
Upstream 100 bases:
>100_bases TAGTGAATATTTTGTGCAATTGGGGTGGAAATAGTGCTACCGTATCGTATACAATTGCCGGCGTGATGTGCCGTAATCAA GGAGAGAGGCTCACAAAATA
Downstream 100 bases:
>100_bases TTTGTCCTCGGGTTCTTTGTTTTCAAGGTGCGTTTTACAAAGTGTGGTTTGCGTGTTGCGAAGAAAGTTGTTCGAGGGAT CCGTTTTCTTTCGGCGAGTT
Product: putative carboxypeptidase
Products: NA
Alternate protein names: Carboxypeptidase; Zn-Dependent Carboxypeptidase; Thermostable Carboxypeptidase; Carboxypeptidase Taq Metallopeptidase; Peptidase; Peptidase M; Metal-Dependent Carboxypeptidase; Carboxypeptidase Taq Metallopeptidase Superfamily; Carboxypeptidase I; Zn Dependent Carboxypeptidase; Cobalt-Activating Carboxypeptidase; Zn-Dependendrmostable Carboxypeptidase; M32 Family Carboxypeptidase; Molecular Chaperone DNAK; Thermostable Carboxypeptidase 1 Putativ; Rmostable Metallocarboxypeptidase; Metallocarboxypeptidase; Carboxypeptidase TAQ
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MEEYEKLEKIFARIDSLQKTLCFLDFDARLHSEFANEKLLQVITLKEIIHDVATSDELYFLIEQAKLKVKDLNDWQRVNF GFMQDFCTRRRGLPFDVVKSFTEASFTCRSAYAAAGKARDFSLVKEEFKRLIEVVAQIAALYAKDSGLDKYSALLRAYQI DPEHLEQLCIGVSPLLKAKVRGVGEIALNKSQEKGGAKNSHKRVVEKFFPKNVVRVFYSDHFYLSGGENELKLIIQNGGS AFFPTLLFLLGQGLYIRNLPYDKWRTQPICNPTSISMYAVQGFLFSHFLFEEKNFAQFLGVEEKSEYSSSIMGANKFVAL THLMILFSIEKSLINGEVSVDDVEKLFVEDLSYYFGANDPQVSILDNHHWFFGEFCYYPSYLKGMIASGQIFHILKSEFP GLREGKSLIRKLVAWLGANVYTKGARCSMDELITRLTGEPLDCRFFKKFDQ
Sequences:
>Translated_451_residues MEEYEKLEKIFARIDSLQKTLCFLDFDARLHSEFANEKLLQVITLKEIIHDVATSDELYFLIEQAKLKVKDLNDWQRVNF GFMQDFCTRRRGLPFDVVKSFTEASFTCRSAYAAAGKARDFSLVKEEFKRLIEVVAQIAALYAKDSGLDKYSALLRAYQI DPEHLEQLCIGVSPLLKAKVRGVGEIALNKSQEKGGAKNSHKRVVEKFFPKNVVRVFYSDHFYLSGGENELKLIIQNGGS AFFPTLLFLLGQGLYIRNLPYDKWRTQPICNPTSISMYAVQGFLFSHFLFEEKNFAQFLGVEEKSEYSSSIMGANKFVAL THLMILFSIEKSLINGEVSVDDVEKLFVEDLSYYFGANDPQVSILDNHHWFFGEFCYYPSYLKGMIASGQIFHILKSEFP GLREGKSLIRKLVAWLGANVYTKGARCSMDELITRLTGEPLDCRFFKKFDQ >Mature_451_residues MEEYEKLEKIFARIDSLQKTLCFLDFDARLHSEFANEKLLQVITLKEIIHDVATSDELYFLIEQAKLKVKDLNDWQRVNF GFMQDFCTRRRGLPFDVVKSFTEASFTCRSAYAAAGKARDFSLVKEEFKRLIEVVAQIAALYAKDSGLDKYSALLRAYQI DPEHLEQLCIGVSPLLKAKVRGVGEIALNKSQEKGGAKNSHKRVVEKFFPKNVVRVFYSDHFYLSGGENELKLIIQNGGS AFFPTLLFLLGQGLYIRNLPYDKWRTQPICNPTSISMYAVQGFLFSHFLFEEKNFAQFLGVEEKSEYSSSIMGANKFVAL THLMILFSIEKSLINGEVSVDDVEKLFVEDLSYYFGANDPQVSILDNHHWFFGEFCYYPSYLKGMIASGQIFHILKSEFP GLREGKSLIRKLVAWLGANVYTKGARCSMDELITRLTGEPLDCRFFKKFDQ
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51686; Mature: 51686
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEYEKLEKIFARIDSLQKTLCFLDFDARLHSEFANEKLLQVITLKEIIHDVATSDELYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE LIEQAKLKVKDLNDWQRVNFGFMQDFCTRRRGLPFDVVKSFTEASFTCRSAYAAAGKARD EEHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH FSLVKEEFKRLIEVVAQIAALYAKDSGLDKYSALLRAYQIDPEHLEQLCIGVSPLLKAKV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHH RGVGEIALNKSQEKGGAKNSHKRVVEKFFPKNVVRVFYSDHFYLSGGENELKLIIQNGGS CCCHHHHCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCEEEEEEECCCC AFFPTLLFLLGQGLYIRNLPYDKWRTQPICNPTSISMYAVQGFLFSHFLFEEKNFAQFLG HHHHHHHHHHCCCCEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHC VEEKSEYSSSIMGANKFVALTHLMILFSIEKSLINGEVSVDDVEKLFVEDLSYYFGANDP CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC QVSILDNHHWFFGEFCYYPSYLKGMIASGQIFHILKSEFPGLREGKSLIRKLVAWLGANV EEEEECCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC YTKGARCSMDELITRLTGEPLDCRFFKKFDQ CCCCCCCCHHHHHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MEEYEKLEKIFARIDSLQKTLCFLDFDARLHSEFANEKLLQVITLKEIIHDVATSDELYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE LIEQAKLKVKDLNDWQRVNFGFMQDFCTRRRGLPFDVVKSFTEASFTCRSAYAAAGKARD EEHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH FSLVKEEFKRLIEVVAQIAALYAKDSGLDKYSALLRAYQIDPEHLEQLCIGVSPLLKAKV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHH RGVGEIALNKSQEKGGAKNSHKRVVEKFFPKNVVRVFYSDHFYLSGGENELKLIIQNGGS CCCHHHHCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCEEEEEEECCCC AFFPTLLFLLGQGLYIRNLPYDKWRTQPICNPTSISMYAVQGFLFSHFLFEEKNFAQFLG HHHHHHHHHHCCCCEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHC VEEKSEYSSSIMGANKFVALTHLMILFSIEKSLINGEVSVDDVEKLFVEDLSYYFGANDP CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC QVSILDNHHWFFGEFCYYPSYLKGMIASGQIFHILKSEFPGLREGKSLIRKLVAWLGANV EEEEECCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC YTKGARCSMDELITRLTGEPLDCRFFKKFDQ CCCCCCCCHHHHHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA