Definition Neorickettsia sennetsu str. Miyayama chromosome, complete genome.
Accession NC_007798
Length 859,006

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The map label for this gene is 88608335

Identifier: 88608335

GI number: 88608335

Start: 702873

End: 703850

Strand: Reverse

Name: 88608335

Synonym: NSE_0791

Alternate gene names: NA

Gene position: 703850-702873 (Counterclockwise)

Preceding gene: 88608241

Following gene: 88608466

Centisome position: 81.94

GC content: 46.52

Gene sequence:

>978_bases
TTGAGTGGTTTTTCTATTTTTTCTGTTTATCTCATGCAAAAAGTAAATATTAAGATGCTGCAAAAGTCCATTTTGTGCGG
CTTTAGGGGAATAACCAATTTCTTCATCGGTGCCATTGTTGCGAGTAATGGTGCTGTTATCAGATCTGCCGTGCCTGGAG
GTGGATCAGGACCTCAAAAAAAACGTGAGGGACTCTATGCAATGTATAACAATTTCGTCCCAACGCTGGAAGTGTTGGTG
TGTATGGGCGTTATATGTGTCTTGCTAGAGCGTCTCGCCTTCAAGAAGGCTATCACTAATCCGTGGGCGAGAGTAGCGAC
CGCAGTGGTAATTTGTATGGCGCTCATGATGCTGATCTGCACCTTGCTTAGGGTACTTGATAGGCGTAGGGACTGTTGTG
CGGACTATGACTATGATCAATCCTTTAACAGGATGGGTGGTTATGGCATGCACTTTAACATTCCTGGTCATGTGGAAAGC
AGGAACATGTTGTGTAAGCTTGTTCCTGGCATGAGGTTGTCAAGATTTTTTGCGTTCGATAGGCATGTTCCTGAGCCGGA
AGAGCATAGTTGTCCGGTTGTTACTCCTGGGGAAAAAGCCTTGCACTGTCTTGGTGCATTGCTTTCTGTGCCGTTTTGGG
TTGCGATGCTTGCACTGAACATTATTGAATTACCTATTGCTGTTATCATTGATAGTCTTGCTTTATGTACTCGTAACGGG
CGAGAATATCCTTTTGGTGGTTCTCGTGATGTTGTGTGCCAAGCAATATATAGTTTTTATCAACTGATCGAGCCAGTTAC
CTGCGTTTTACCAGAGGGTATGCAAAGAGGCATTGGCGCGGGCTTTGGTGCTGTTGTGCGAAGAGTCTTGGGTATGCCTG
GTGAAGGGCGTCGCACAGGAGAAAGAGAGCCTGGGTGCCAATTAGAGAGCGCGGAGGTGCTTCAAGAAGCTGAAGGAAGG
TGCTCGAGCTGCGCATGA

Upstream 100 bases:

>100_bases
TTTCTGGCCATATAAAGAAAATGGCTTAACCTTGGGTCGTTGTGTGATGTGCTAGCTGTCTCCTAATTTTGTTGGAGAGG
TCCGTTGGTTGTGCTTTTAG

Downstream 100 bases:

>100_bases
TGGTTTTCCTTTCCTGCCATTAGTTTGTGTGAGACTATTCCTCCTTGCGGCCACTTATTGTTGGGCGTGTGATCGGTGGT
GTCGGGTCCAGCCGTTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQKKREGLYAMYNNFVPTLEVLV
CMGVICVLLERLAFKKAITNPWARVATAVVICMALMMLICTLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVES
RNMLCKLVPGMRLSRFFAFDRHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNG
REYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTGEREPGCQLESAEVLQEAEGR
CSSCA

Sequences:

>Translated_325_residues
MSGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQKKREGLYAMYNNFVPTLEVLV
CMGVICVLLERLAFKKAITNPWARVATAVVICMALMMLICTLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVES
RNMLCKLVPGMRLSRFFAFDRHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNG
REYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTGEREPGCQLESAEVLQEAEGR
CSSCA
>Mature_324_residues
SGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQKKREGLYAMYNNFVPTLEVLVC
MGVICVLLERLAFKKAITNPWARVATAVVICMALMMLICTLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVESR
NMLCKLVPGMRLSRFFAFDRHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNGR
EYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTGEREPGCQLESAEVLQEAEGRC
SSCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35679; Mature: 35547

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
KREGLYAMYNNFVPTLEVLVCMGVICVLLERLAFKKAITNPWARVATAVVICMALMMLIC
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVESRNMLCKLVPGMRLSRFFAFD
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHH
RHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
REYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCC
EREPGCQLESAEVLQEAEGRCSSCA
CCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH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CCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA