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The map label for this gene is 88608244

Identifier: 88608244

GI number: 88608244

Start: 523005

End: 523976

Strand: Reverse

Name: 88608244

Synonym: NSE_0601

Alternate gene names: NA

Gene position: 523976-523005 (Counterclockwise)

Preceding gene: 88608291

Following gene: 88608149

Centisome position: 61.0

GC content: 38.17

Gene sequence:

>972_bases
ATGAGATCTTATATAGAGAATTTTATTAGAGGAAATGGATCTATCTCATTCTCAAAATTTATTGAGTTGAGCATGTACCA
TCCGAGCAAAGGGTACTATATGACAAGAAACCCAATAGGTAAAAGTGGGGATTACATTACTGCACCAGAGATCTCGTCTC
TTTTTGGAAAGACGATTGCAGTGTGGATCCTTGAACAGTGGGAAAAGTTAGGAAAACCAGGTGAAATTGTACTAGCAGAA
CTTGGTCCTGGGAGCGGAATGATGATGTTTGATATTCTTAATACCATAAGGAATATTGAGCCTTTCTATGATGCAGTTAC
TGTTCATATGGTAGAGATAAGCCCGTTTCTCAGAGGTGTACAGATGGAAAATTTACGTCCTCATAGCTGTAAGACTCGGT
GGTGTAAGAGTGTAGATGAGCTTCCGAACGGTAAACTGCTTGTTCTGGCAAACGAGTTTTTTGATGCACTTCCAATAGAC
CAATTTATTTTTTGGGGTGGAAATTTTTTTGAACGGAAAATAACGGAGGATTTTCAAGTAGAGGAAGAAAAAACTCAAAA
AAAATTTAGTGGAGAATTTAAAGATGGAGATATAGTTGAGATAAGTTTGCTTGGGAAGCAGATCGCCTCGTCAATACTTG
CTAGAATTGCGAAAGACGGGGGAGGTGGACTCATAATAGATTATGGGCACGCTACCCGCACACGAAGAAGTACAGTACAG
GCAGTTAAGGGACATAGATTTATCGATATTTTTGAAAGTATAGGCGAATCAGATATAACCCATGAAATTGATTTTTCTTA
CTTATTTCCGAGGGCCAAATTAATGACACAAGGAGATTTTTTATCCCTCTACGGTATATTTGAGTTTGCGAAGAGGTTTT
CCGCTACCGACACTGGAATACTTGAGCAAACTTTATCTAGGCTTGTAGATAAGGGAAAAATGGGCAGATTATTTAAGTGT
GCAATAATTTAA

Upstream 100 bases:

>100_bases
GTAGATCTCTTATGTCTCTTTGAAGTTGGTTTGTGTATCGATTATTCTTCTACGCAAAGTGCTCGAGGGATGTATTATTG
GCGGGTTTTAATAAGAACAG

Downstream 100 bases:

>100_bases
ATTGAATCAATGGCTCTCATGTAAGCTTCAGTTCGCTAGTTGCGGTAGCTCTGGGGGAGTAGTCATCAGCCTCACACGGA
GAGTCTATCTGAAGTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MRSYIENFIRGNGSISFSKFIELSMYHPSKGYYMTRNPIGKSGDYITAPEISSLFGKTIAVWILEQWEKLGKPGEIVLAE
LGPGSGMMMFDILNTIRNIEPFYDAVTVHMVEISPFLRGVQMENLRPHSCKTRWCKSVDELPNGKLLVLANEFFDALPID
QFIFWGGNFFERKITEDFQVEEEKTQKKFSGEFKDGDIVEISLLGKQIASSILARIAKDGGGGLIIDYGHATRTRRSTVQ
AVKGHRFIDIFESIGESDITHEIDFSYLFPRAKLMTQGDFLSLYGIFEFAKRFSATDTGILEQTLSRLVDKGKMGRLFKC
AII

Sequences:

>Translated_323_residues
MRSYIENFIRGNGSISFSKFIELSMYHPSKGYYMTRNPIGKSGDYITAPEISSLFGKTIAVWILEQWEKLGKPGEIVLAE
LGPGSGMMMFDILNTIRNIEPFYDAVTVHMVEISPFLRGVQMENLRPHSCKTRWCKSVDELPNGKLLVLANEFFDALPID
QFIFWGGNFFERKITEDFQVEEEKTQKKFSGEFKDGDIVEISLLGKQIASSILARIAKDGGGGLIIDYGHATRTRRSTVQ
AVKGHRFIDIFESIGESDITHEIDFSYLFPRAKLMTQGDFLSLYGIFEFAKRFSATDTGILEQTLSRLVDKGKMGRLFKC
AII
>Mature_323_residues
MRSYIENFIRGNGSISFSKFIELSMYHPSKGYYMTRNPIGKSGDYITAPEISSLFGKTIAVWILEQWEKLGKPGEIVLAE
LGPGSGMMMFDILNTIRNIEPFYDAVTVHMVEISPFLRGVQMENLRPHSCKTRWCKSVDELPNGKLLVLANEFFDALPID
QFIFWGGNFFERKITEDFQVEEEKTQKKFSGEFKDGDIVEISLLGKQIASSILARIAKDGGGGLIIDYGHATRTRRSTVQ
AVKGHRFIDIFESIGESDITHEIDFSYLFPRAKLMTQGDFLSLYGIFEFAKRFSATDTGILEQTLSRLVDKGKMGRLFKC
AII

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=306, Percent_Identity=29.4117647058824, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI193211224, Length=344, Percent_Identity=30.8139534883721, Blast_Score=137, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24645885, Length=294, Percent_Identity=31.2925170068027, Blast_Score=151, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36585; Mature: 36585

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSYIENFIRGNGSISFSKFIELSMYHPSKGYYMTRNPIGKSGDYITAPEISSLFGKTIA
CHHHHHHHHHCCCCEEHHHHEEEEEECCCCCEEEECCCCCCCCCEEECCCHHHHHHHHHH
VWILEQWEKLGKPGEIVLAELGPGSGMMMFDILNTIRNIEPFYDAVTVHMVEISPFLRGV
HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHEEEEEEHHHHHHCC
QMENLRPHSCKTRWCKSVDELPNGKLLVLANEFFDALPIDQFIFWGGNFFERKITEDFQV
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHHHEECCCCHHHHHCCCCCCC
EEEKTQKKFSGEFKDGDIVEISLLGKQIASSILARIAKDGGGGLIIDYGHATRTRRSTVQ
CHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
AVKGHRFIDIFESIGESDITHEIDFSYLFPRAKLMTQGDFLSLYGIFEFAKRFSATDTGI
HHHCCHHHHHHHHCCCCCCCEECCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
LEQTLSRLVDKGKMGRLFKCAII
HHHHHHHHHCCCCCCCEEEEEEC
>Mature Secondary Structure
MRSYIENFIRGNGSISFSKFIELSMYHPSKGYYMTRNPIGKSGDYITAPEISSLFGKTIA
CHHHHHHHHHCCCCEEHHHHEEEEEECCCCCEEEECCCCCCCCCEEECCCHHHHHHHHHH
VWILEQWEKLGKPGEIVLAELGPGSGMMMFDILNTIRNIEPFYDAVTVHMVEISPFLRGV
HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHEEEEEEHHHHHHCC
QMENLRPHSCKTRWCKSVDELPNGKLLVLANEFFDALPIDQFIFWGGNFFERKITEDFQV
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHHHEECCCCHHHHHCCCCCCC
EEEKTQKKFSGEFKDGDIVEISLLGKQIASSILARIAKDGGGGLIIDYGHATRTRRSTVQ
CHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
AVKGHRFIDIFESIGESDITHEIDFSYLFPRAKLMTQGDFLSLYGIFEFAKRFSATDTGI
HHHCCHHHHHHHHCCCCCCCEECCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
LEQTLSRLVDKGKMGRLFKCAII
HHHHHHHHHCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA