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The map label for this gene is yadR [C]

Identifier: 88608116

GI number: 88608116

Start: 244126

End: 244491

Strand: Reverse

Name: yadR [C]

Synonym: NSE_0301

Alternate gene names: 88608116

Gene position: 244491-244126 (Counterclockwise)

Preceding gene: 88608191

Following gene: 88608336

Centisome position: 28.46

GC content: 38.25

Gene sequence:

>366_bases
ATGAACTTAAATGGACCACCCATCGCAGTGAGCGCTTTGGCATTTCAGAAGTTTGTTGAACTGATCGATGAAAGAAAAAG
AAAGGGCAAGCCAACCCTTGGTATAAGGATAAAATTACTTTCCAAAGGATGCGGTGGAAATGAATACGGTATGGAGTACG
TTGAAGAAGCAGAACAATGTGATGAAATGCTAGAGCTAGCACAACCTCCTATGGGAAAGGTGTCATTGTTTGTTGATCCA
AAAACGATGCTTAGGATTATTGGAACCAAAATAGACTATGAAGAAACAAAATTCAAAAGTGGGTTCGTTTTTAAAAATCC
CAGAGAGAAAGGAAGATGTGGATGTGGTAAAAGTTTTTACTATTGA

Upstream 100 bases:

>100_bases
AGATTTTAGAGAGAAACAGGTGACTTCTAGCACTGAGGAGGCAGGTAACGAAAATACAGAGAACAAAAGCTAAAGCAAGG
CTCCTCATATCTAGATTCAG

Downstream 100 bases:

>100_bases
GTGAGTACAATACTAAATTGAATGAGACAGGTGCGGCACTAAAATCCACTCTAAGCAGAGTAGGCAAGGACTTTCCTTAT
TTGAAACGCAATTAGATCAA

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNLNGPPIAVSALAFQKFVELIDERKRKGKPTLGIRIKLLSKGCGGNEYGMEYVEEAEQCDEMLELAQPPMGKVSLFVDP
KTMLRIIGTKIDYEETKFKSGFVFKNPREKGRCGCGKSFYY

Sequences:

>Translated_121_residues
MNLNGPPIAVSALAFQKFVELIDERKRKGKPTLGIRIKLLSKGCGGNEYGMEYVEEAEQCDEMLELAQPPMGKVSLFVDP
KTMLRIIGTKIDYEETKFKSGFVFKNPREKGRCGCGKSFYY
>Mature_121_residues
MNLNGPPIAVSALAFQKFVELIDERKRKGKPTLGIRIKLLSKGCGGNEYGMEYVEEAEQCDEMLELAQPPMGKVSLFVDP
KTMLRIIGTKIDYEETKFKSGFVFKNPREKGRCGCGKSFYY

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=93, Percent_Identity=40.8602150537634, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786351, Length=113, Percent_Identity=30.9734513274336, Blast_Score=63, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=86, Percent_Identity=37.2093023255814, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193209025, Length=86, Percent_Identity=37.2093023255814, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323001, Length=85, Percent_Identity=40, Blast_Score=75, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24642263, Length=87, Percent_Identity=39.0804597701149, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13650; Mature: 13650

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNGPPIAVSALAFQKFVELIDERKRKGKPTLGIRIKLLSKGCGGNEYGMEYVEEAEQC
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
DEMLELAQPPMGKVSLFVDPKTMLRIIGTKIDYEETKFKSGFVFKNPREKGRCGCGKSFY
HHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCHHHCCCCCEECCCCCCCCCCCCCCCC
Y
C
>Mature Secondary Structure
MNLNGPPIAVSALAFQKFVELIDERKRKGKPTLGIRIKLLSKGCGGNEYGMEYVEEAEQC
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
DEMLELAQPPMGKVSLFVDPKTMLRIIGTKIDYEETKFKSGFVFKNPREKGRCGCGKSFY
HHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCHHHCCCCCEECCCCCCCCCCCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]