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The map label for this gene is ycgE [C]

Identifier: 88608015

GI number: 88608015

Start: 236932

End: 237261

Strand: Reverse

Name: ycgE [C]

Synonym: NSE_0291

Alternate gene names: 88608015

Gene position: 237261-236932 (Counterclockwise)

Preceding gene: 88608879

Following gene: 88608166

Centisome position: 27.62

GC content: 40.0

Gene sequence:

>330_bases
TTGCATATGTTTTGTTTTGAGAAGGGAAAGCTATACTATTCGATACGTGAAGTTGCAGAAATTATAGGACTAAAAGAGTA
TGTGTTGAGATACTGGGAAACTCAGTTCCCTGAGACACTTAAACCAAAAAGACAATCTGGGAAAAGACTTTACACACAAA
GCGATATAAAGGCAATACAGAAAATACAAGAGCTACTTCACAAAAGAGGAATGACCATAAGAGGTGCGCGCTCAGCACTG
GAAGGAGATCCCAATCAAACAGAGCTCGAAATGGCAACGGAACATCTCAGGTCGCTCAGGGATTTTCTCACAAAATTTGC
AAAAGACTAG

Upstream 100 bases:

>100_bases
TGGCCCATAAGTTTCGTGCAAAAAAATATACATGGTGGTTTTGGAGTGATGCTTGACGATCTACTCGCAGCATTTGCTAC
CTTCATAATGATTTCAATTA

Downstream 100 bases:

>100_bases
GAAGGTGCAAGTGAATTTTTATACAAATTCTATGATAGCCATTGGAGCAGCATCACCGACTCTGTATCCGGTCTTAACAA
TCCTACAGTAACCGCCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Protein; MerR-Family Transcriptional Regulator

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MHMFCFEKGKLYYSIREVAEIIGLKEYVLRYWETQFPETLKPKRQSGKRLYTQSDIKAIQKIQELLHKRGMTIRGARSAL
EGDPNQTELEMATEHLRSLRDFLTKFAKD

Sequences:

>Translated_109_residues
MHMFCFEKGKLYYSIREVAEIIGLKEYVLRYWETQFPETLKPKRQSGKRLYTQSDIKAIQKIQELLHKRGMTIRGARSAL
EGDPNQTELEMATEHLRSLRDFLTKFAKD
>Mature_109_residues
MHMFCFEKGKLYYSIREVAEIIGLKEYVLRYWETQFPETLKPKRQSGKRLYTQSDIKAIQKIQELLHKRGMTIRGARSAL
EGDPNQTELEMATEHLRSLRDFLTKFAKD

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12926; Mature: 12926

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMFCFEKGKLYYSIREVAEIIGLKEYVLRYWETQFPETLKPKRQSGKRLYTQSDIKAIQ
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHCCCCCHHHHHHHHHH
KIQELLHKRGMTIRGARSALEGDPNQTELEMATEHLRSLRDFLTKFAKD
HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHMFCFEKGKLYYSIREVAEIIGLKEYVLRYWETQFPETLKPKRQSGKRLYTQSDIKAIQ
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHCCCCCHHHHHHHHHH
KIQELLHKRGMTIRGARSALEGDPNQTELEMATEHLRSLRDFLTKFAKD
HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA