Click here to switch to the map view.

The map label for this gene is 88607893

Identifier: 88607893

GI number: 88607893

Start: 887127

End: 888488

Strand: Direct

Name: 88607893

Synonym: APH_0838

Alternate gene names: NA

Gene position: 887127-888488 (Clockwise)

Preceding gene: 88607509

Following gene: 88607458

Centisome position: 60.3

GC content: 42.88

Gene sequence:

>1362_bases
TTGAAAGCTACACTAATAACATGTTATACACAAGTGTGTGTATGTTATGGTTATGTAATGCATAGTTCAATGATTTATAA
TTCAAAAACCTACAGGGTTTATAGTCGTGTAGCAGGTGAGATCAAAGATGATAGGCTTACGCATAGAGCTGTTGCTGTAT
ATTGTAGCTGGTTGCTGGAAAGGTCTATAAATGAGTTGCGTGCAGTTCTAGAGACATCTGGACCGGATGGTTATGTGTTC
GTTCAGCTAGCTCTAGATCGTATGGAAGAGGTATATAATGATATTTATCAGGCACGAGCAGGTACTCATGATGATATAGT
GAAAGCACTATCTGCTAATTGTGATCAGTATCTTTTTCAATGTCGCAGTGCGTTGTTTCATCTTTCACGTTTCCGCGATG
GGTCATTACCTCTAGAAGGACCTGTAGGCGACGACGTTTCTAGCTTCTGTACTGCCTCCTCTAATATCGCCTCGGTTATA
ACTCTTCTCCAGACAAATCGAAGTCTTCCCGATAGGGTATCATCCGATACAAGAAACAGATTGTGTATGTTGATAGACTC
ACTTAGTGATTCTGTTACTGCAATGCCTGATAGTGCTTTTATGCACTTAGCTCAGGGTTCTGCTGGGTTTGCTAGTGTAT
ACGATGCGAGATGCGCGTTTCTGTTCGCAGTAGAAGAATTGCGTGCTCTGGCTTACACTGTGCACACAGATACTGACACT
GCTGCTAGAGTATGTTTAGGAGATAGCTTTGAAGCTTTGCTAGAAAATATTAGAGAAGCAATACGTAGAGTTTCTGATGC
ACCAGGTGTTACTGCTCGAGCATCCTGTAGTTGTACACTGGCTAATAAGGCGCTTGCCAGGATCCAAGCTATGTTTGAGA
ATTACGTAAATGGCACCCACGCTCGCGATTCTGACCTCAGCGACGAAATGTATATGAGTACTACTATTGTATCTGCATAT
GCAGCCGCACGTAGCCTGTGCTATAGTTGCATATCTGCGGCTTCAGAACTGCCGTGTGTGCCTTCTATTATAGAGTGTTC
TAGCGCACTGTATGATCTATACTCACATTTAAGTGCCCGTGCATTTATAGACCTGGCTGATCCACATGATGTCAATAATA
TACTTCCTGCTTTGAACAAAGCACGTGAAGCTCTAGGCAAAGTAGACCGGTCTACTTTGCCTAGTAATCGTGATACTGAG
ATATACGATAGGCTTCGTAAAGCAATAGAGCAAGCTTCTGGACGATGCATCATGAGACAGTTAGAGCCTGATTATCTTGA
TCTAGCACCTAGTACAGGACAGAATGATCTGTCGATTGAGGGATTGGGGGCTGCTGGAGCTTCTCATGATTTGCATCATT
AA

Upstream 100 bases:

>100_bases
TTAAGCATGTATTATGGTAATGCTAACAGGTGGCAGGCCGAAAGAATTTACAACTATCTGTCTTACAAATTCTAGCTATA
GTTTAATGTAGCATTTCCCT

Downstream 100 bases:

>100_bases
TTAGTAGTTGTAGGTTCATTTTGTGGTATTGCTGTGCGCGCCTTTGTAGGTGCGTACGGCAGTTGCTACAAGCAGCTTGT
TTTGCTTGCATTAATTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MKATLITCYTQVCVCYGYVMHSSMIYNSKTYRVYSRVAGEIKDDRLTHRAVAVYCSWLLERSINELRAVLETSGPDGYVF
VQLALDRMEEVYNDIYQARAGTHDDIVKALSANCDQYLFQCRSALFHLSRFRDGSLPLEGPVGDDVSSFCTASSNIASVI
TLLQTNRSLPDRVSSDTRNRLCMLIDSLSDSVTAMPDSAFMHLAQGSAGFASVYDARCAFLFAVEELRALAYTVHTDTDT
AARVCLGDSFEALLENIREAIRRVSDAPGVTARASCSCTLANKALARIQAMFENYVNGTHARDSDLSDEMYMSTTIVSAY
AAARSLCYSCISAASELPCVPSIIECSSALYDLYSHLSARAFIDLADPHDVNNILPALNKAREALGKVDRSTLPSNRDTE
IYDRLRKAIEQASGRCIMRQLEPDYLDLAPSTGQNDLSIEGLGAAGASHDLHH

Sequences:

>Translated_453_residues
MKATLITCYTQVCVCYGYVMHSSMIYNSKTYRVYSRVAGEIKDDRLTHRAVAVYCSWLLERSINELRAVLETSGPDGYVF
VQLALDRMEEVYNDIYQARAGTHDDIVKALSANCDQYLFQCRSALFHLSRFRDGSLPLEGPVGDDVSSFCTASSNIASVI
TLLQTNRSLPDRVSSDTRNRLCMLIDSLSDSVTAMPDSAFMHLAQGSAGFASVYDARCAFLFAVEELRALAYTVHTDTDT
AARVCLGDSFEALLENIREAIRRVSDAPGVTARASCSCTLANKALARIQAMFENYVNGTHARDSDLSDEMYMSTTIVSAY
AAARSLCYSCISAASELPCVPSIIECSSALYDLYSHLSARAFIDLADPHDVNNILPALNKAREALGKVDRSTLPSNRDTE
IYDRLRKAIEQASGRCIMRQLEPDYLDLAPSTGQNDLSIEGLGAAGASHDLHH
>Mature_453_residues
MKATLITCYTQVCVCYGYVMHSSMIYNSKTYRVYSRVAGEIKDDRLTHRAVAVYCSWLLERSINELRAVLETSGPDGYVF
VQLALDRMEEVYNDIYQARAGTHDDIVKALSANCDQYLFQCRSALFHLSRFRDGSLPLEGPVGDDVSSFCTASSNIASVI
TLLQTNRSLPDRVSSDTRNRLCMLIDSLSDSVTAMPDSAFMHLAQGSAGFASVYDARCAFLFAVEELRALAYTVHTDTDT
AARVCLGDSFEALLENIREAIRRVSDAPGVTARASCSCTLANKALARIQAMFENYVNGTHARDSDLSDEMYMSTTIVSAY
AAARSLCYSCISAASELPCVPSIIECSSALYDLYSHLSARAFIDLADPHDVNNILPALNKAREALGKVDRSTLPSNRDTE
IYDRLRKAIEQASGRCIMRQLEPDYLDLAPSTGQNDLSIEGLGAAGASHDLHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49769; Mature: 49769

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATLITCYTQVCVCYGYVMHSSMIYNSKTYRVYSRVAGEIKDDRLTHRAVAVYCSWLLE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RSINELRAVLETSGPDGYVFVQLALDRMEEVYNDIYQARAGTHDDIVKALSANCDQYLFQ
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
CRSALFHLSRFRDGSLPLEGPVGDDVSSFCTASSNIASVITLLQTNRSLPDRVSSDTRNR
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCHHHHH
LCMLIDSLSDSVTAMPDSAFMHLAQGSAGFASVYDARCAFLFAVEELRALAYTVHTDTDT
HHHHHHHHCCHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCH
AARVCLGDSFEALLENIREAIRRVSDAPGVTARASCSCTLANKALARIQAMFENYVNGTH
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
ARDSDLSDEMYMSTTIVSAYAAARSLCYSCISAASELPCVPSIIECSSALYDLYSHLSAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AFIDLADPHDVNNILPALNKAREALGKVDRSTLPSNRDTEIYDRLRKAIEQASGRCIMRQ
HEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEHHH
LEPDYLDLAPSTGQNDLSIEGLGAAGASHDLHH
CCCCCEECCCCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKATLITCYTQVCVCYGYVMHSSMIYNSKTYRVYSRVAGEIKDDRLTHRAVAVYCSWLLE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RSINELRAVLETSGPDGYVFVQLALDRMEEVYNDIYQARAGTHDDIVKALSANCDQYLFQ
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
CRSALFHLSRFRDGSLPLEGPVGDDVSSFCTASSNIASVITLLQTNRSLPDRVSSDTRNR
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCHHHHH
LCMLIDSLSDSVTAMPDSAFMHLAQGSAGFASVYDARCAFLFAVEELRALAYTVHTDTDT
HHHHHHHHCCHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCH
AARVCLGDSFEALLENIREAIRRVSDAPGVTARASCSCTLANKALARIQAMFENYVNGTH
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
ARDSDLSDEMYMSTTIVSAYAAARSLCYSCISAASELPCVPSIIECSSALYDLYSHLSAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AFIDLADPHDVNNILPALNKAREALGKVDRSTLPSNRDTEIYDRLRKAIEQASGRCIMRQ
HEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEHHH
LEPDYLDLAPSTGQNDLSIEGLGAAGASHDLHH
CCCCCEECCCCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA