Click here to switch to the map view.

The map label for this gene is 88607458

Identifier: 88607458

GI number: 88607458

Start: 889279

End: 890607

Strand: Direct

Name: 88607458

Synonym: APH_0839

Alternate gene names: NA

Gene position: 889279-890607 (Clockwise)

Preceding gene: 88607893

Following gene: 88607010

Centisome position: 60.44

GC content: 45.3

Gene sequence:

>1329_bases
ATGTGTGTATGTTATGGTGCTGTTATGCATAGTTTCATAGATCCTATATCTAAAACCTATAGAGTTTATAGTAATGTAGA
AGAGAGTCTCAGAAGTGGTGAGTTTACGGAGCGCGCTGTTGCTGTGCGTACGTCTTGGTTGTTGGAACAGGCTCTAGAAA
GGTTGCACAGAGTTGTAGAAGCCTCTGAAGAAGGGATCCCTTCATCTCTCGTCAAGATGGCTTTGCAGAACGTAAGGGAT
ATATACAGTAATATTTATAGGGCGCGTGAAGGTACTGCCAACAATATAAAAAAGGCGCTAGTTGATAATGGTCGTGAACA
TATTTCTAAATTGCGCACTGTGTTGCTTTACCTTGCGCTTGCACGTAGTAAATCGTTGCCTAATGAAGGGCCGGCAGGAG
CATCTGTTACTGAAATAAGTGCCGCTTCCTACAATGCCGCCTCGGCTTTATCTATTCTCCAGTCAAATCTTGGTCTTCCA
GATGAAGCATCGGTCAATACAAGAGATAGATTGTGTGTATTGCTAGACTCACTTAGTGGTACTATTGAGCTAATTCCTGG
CCGTGCATTACTTCGCTCAGTACGGGGCTCGACTGGGTTTATTTCCCCATCTGAGGTAAGAAATGCATTATTGTTGGCTG
TAGAAGAGGCACACGCGTTGGTGTACACTACGCATGACAGTGCTGACAAAGATGCTAGAGGATGTGTGCAAGGCGCGTTA
GAACTTGTGCTATATTCAATAAAACGAGTAATATGTGGGATTAGAGGAAAAAATATTAGTTCCAGAGCGTCATGGAGTTG
TGCGCTGGCTAGTCAAATGATGTATACTATCCAGGAAGTGTTTGATGGTTATGTCAGCAATACCCATACTCGCGATTCTG
ACGTAAGTGACAAAGAGTTTCTTAGTAATAACGTTATACGTGCGTTCACAAGTGCACGTCACCTGCTTGCTAGTTGCGTT
TCTGTGCCACCAGAGGAGAGACCATCGTCTTCTGAGTATGTGATACGGTGTAGTGGCATGCTGCGTGAGGTATATTCACA
TTTGGGTACCTGTGAATCCATAGACCTGGCTAACCCTCATGGTGCCAACAATATACTTCCTGCTTTAAACAAAGCACGTG
AAGCTCTCGACGAAGTAGATCCGTCTGATTTGCCGAGTCATCGTGATGCTGAGACATACTCTAGAATTCGTGAAGCAATA
ATGCAAGCTTCTCGGCGATGCATCATGCAACAGTGCTCTGAGCCTGATCTTCTTGATTCAGCGCTCGGTGCAGGATGGGA
TGCTCTGTCGATTGAGGGATTGGGGGCTGGCTGCTGGCGCTTCTCCTGA

Upstream 100 bases:

>100_bases
AACTACAAACAAAACAACTATCTATATCGCAAATTCTCGCTACAGCTCATTAAAGTAGCGTTTCCCTTTGAAAGCTATAC
TAATAACATGTTATACACGA

Downstream 100 bases:

>100_bases
TTTGCATCATTAGTTAGTAGTTGTAGATTCATTTTACGGTATTGCTGTGCGCGCCTTTGCAGGTGCGTACGGCAGTTTCT
ACAAGCAGCTTGTTATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MCVCYGAVMHSFIDPISKTYRVYSNVEESLRSGEFTERAVAVRTSWLLEQALERLHRVVEASEEGIPSSLVKMALQNVRD
IYSNIYRAREGTANNIKKALVDNGREHISKLRTVLLYLALARSKSLPNEGPAGASVTEISAASYNAASALSILQSNLGLP
DEASVNTRDRLCVLLDSLSGTIELIPGRALLRSVRGSTGFISPSEVRNALLLAVEEAHALVYTTHDSADKDARGCVQGAL
ELVLYSIKRVICGIRGKNISSRASWSCALASQMMYTIQEVFDGYVSNTHTRDSDVSDKEFLSNNVIRAFTSARHLLASCV
SVPPEERPSSSEYVIRCSGMLREVYSHLGTCESIDLANPHGANNILPALNKAREALDEVDPSDLPSHRDAETYSRIREAI
MQASRRCIMQQCSEPDLLDSALGAGWDALSIEGLGAGCWRFS

Sequences:

>Translated_442_residues
MCVCYGAVMHSFIDPISKTYRVYSNVEESLRSGEFTERAVAVRTSWLLEQALERLHRVVEASEEGIPSSLVKMALQNVRD
IYSNIYRAREGTANNIKKALVDNGREHISKLRTVLLYLALARSKSLPNEGPAGASVTEISAASYNAASALSILQSNLGLP
DEASVNTRDRLCVLLDSLSGTIELIPGRALLRSVRGSTGFISPSEVRNALLLAVEEAHALVYTTHDSADKDARGCVQGAL
ELVLYSIKRVICGIRGKNISSRASWSCALASQMMYTIQEVFDGYVSNTHTRDSDVSDKEFLSNNVIRAFTSARHLLASCV
SVPPEERPSSSEYVIRCSGMLREVYSHLGTCESIDLANPHGANNILPALNKAREALDEVDPSDLPSHRDAETYSRIREAI
MQASRRCIMQQCSEPDLLDSALGAGWDALSIEGLGAGCWRFS
>Mature_442_residues
MCVCYGAVMHSFIDPISKTYRVYSNVEESLRSGEFTERAVAVRTSWLLEQALERLHRVVEASEEGIPSSLVKMALQNVRD
IYSNIYRAREGTANNIKKALVDNGREHISKLRTVLLYLALARSKSLPNEGPAGASVTEISAASYNAASALSILQSNLGLP
DEASVNTRDRLCVLLDSLSGTIELIPGRALLRSVRGSTGFISPSEVRNALLLAVEEAHALVYTTHDSADKDARGCVQGAL
ELVLYSIKRVICGIRGKNISSRASWSCALASQMMYTIQEVFDGYVSNTHTRDSDVSDKEFLSNNVIRAFTSARHLLASCV
SVPPEERPSSSEYVIRCSGMLREVYSHLGTCESIDLANPHGANNILPALNKAREALDEVDPSDLPSHRDAETYSRIREAI
MQASRRCIMQQCSEPDLLDSALGAGWDALSIEGLGAGCWRFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48319; Mature: 48319

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVCYGAVMHSFIDPISKTYRVYSNVEESLRSGEFTERAVAVRTSWLLEQALERLHRVVE
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASEEGIPSSLVKMALQNVRDIYSNIYRAREGTANNIKKALVDNGREHISKLRTVLLYLAL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ARSKSLPNEGPAGASVTEISAASYNAASALSILQSNLGLPDEASVNTRDRLCVLLDSLSG
HHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
TIELIPGRALLRSVRGSTGFISPSEVRNALLLAVEEAHALVYTTHDSADKDARGCVQGAL
CEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHH
ELVLYSIKRVICGIRGKNISSRASWSCALASQMMYTIQEVFDGYVSNTHTRDSDVSDKEF
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LSNNVIRAFTSARHLLASCVSVPPEERPSSSEYVIRCSGMLREVYSHLGTCESIDLANPH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC
GANNILPALNKAREALDEVDPSDLPSHRDAETYSRIREAIMQASRRCIMQQCSEPDLLDS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALGAGWDALSIEGLGAGCWRFS
HHCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MCVCYGAVMHSFIDPISKTYRVYSNVEESLRSGEFTERAVAVRTSWLLEQALERLHRVVE
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASEEGIPSSLVKMALQNVRDIYSNIYRAREGTANNIKKALVDNGREHISKLRTVLLYLAL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ARSKSLPNEGPAGASVTEISAASYNAASALSILQSNLGLPDEASVNTRDRLCVLLDSLSG
HHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
TIELIPGRALLRSVRGSTGFISPSEVRNALLLAVEEAHALVYTTHDSADKDARGCVQGAL
CEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHH
ELVLYSIKRVICGIRGKNISSRASWSCALASQMMYTIQEVFDGYVSNTHTRDSDVSDKEF
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LSNNVIRAFTSARHLLASCVSVPPEERPSSSEYVIRCSGMLREVYSHLGTCESIDLANPH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC
GANNILPALNKAREALDEVDPSDLPSHRDAETYSRIREAIMQASRRCIMQQCSEPDLLDS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALGAGWDALSIEGLGAGCWRFS
HHCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA