Click here to switch to the map view.

The map label for this gene is 88607862

Identifier: 88607862

GI number: 88607862

Start: 1035636

End: 1036808

Strand: Direct

Name: 88607862

Synonym: APH_0976

Alternate gene names: NA

Gene position: 1035636-1036808 (Clockwise)

Preceding gene: 88606888

Following gene: 88607919

Centisome position: 70.39

GC content: 39.73

Gene sequence:

>1173_bases
ATGTTTACGTATATAGCCCCTTATATTTTAGTTTTTGTCCTAGCGGTCTTTGCTATTTTCTCTTTTTATGCTAGTTTAAG
CATGAATGACTTAAAACATAACAATAACTTACTTGCGAGTTTAATACTGTCATTAGGTGATGGATTTTATCTCTGGGACG
AAAAGAAGAGGGTTGAGCGTTTCTCTCCTAACCTACATATACTGCTAAACAGTGTTTTTTGCTCTTTTAACGAGCTTGCA
AACTTTTTCGAAGAATCTGATCAACTAAGAAAAAACTTCTCCGAAGCCCGGAGGATAAACAAGTCTTTCGCAATAGATCT
CAAGGGAAGAGATTCAGAAATCTATTGTTTTTGTCATGGACAAAGTATCGTCGATGACCAAGACAGAATTGTAGGGGTTT
TATTGTGGATCCAGAACGTTACAGGTGGCAGGTCTCTAATATCGAATTTGAAGAAGGAAAACGCAAGACTGTCGCGAAGT
TTAGCCGATTATAGCGACATGGTAAATGCTCTGCCTTATCCCATTTGGAAGAGAAGTCCTAGCTCTGATGTGGAGATACA
CAACCCATTTTATGTCAAGTTAATGAAAGACAATAAGAATGGCGATATCTTTACCAGACAACATGCGACTGCTACACACA
GAGATTCGGAAAATACTGCTCTGAAGGAGAAGATCTTCATGATAGTAGACAACGAAAGACGTTTATATTCGTTGACTGAA
ATATCAACAGAAAGAGGAGATTTTATTGGGTACGGGCAAGATATAACTCAGAGCTGGCAGCTGATGGAGGAAATAAAGGG
ATATACTCAAATGCAGAAGAATATCCTACGCAGTTTGCCTTGCGCTGCGGCGATATACGGAAGTGATGGTAGACTACTGT
TTTTTAATGGCCATTTCAGTAAGTTCTGGCAACTTGAGCACTTACGCACCGACAAGGGTGCCACCTATTCTGACATAATA
CGCAAAATATATGAAAGTCGTAAGTTCATAGACGATAAAGCATTTGAGTTACTTAAAAAGCAGCAGTACGAACTCTTCGG
TAAGCTCTCAGAACCATATCACGACACCCTGACTCTCAAAAGCGGAGTGCTGGAGATCTCAGTTGTCCCAAACCACAGAC
AAGAGCTTCTCTTTCTGTACAGTCACAATCAGCTAAAACAGTCTAAGAACTAA

Upstream 100 bases:

>100_bases
TTTAAAGCTACTGGTAACATGTACCTTTATCCTTCCCCTGCGGCATAGGATGTGAACTTGTAAAAGTGAATATGGAGAGA
TTGTGAAGGAAAGTTAGGGA

Downstream 100 bases:

>100_bases
TCCTGAGTAATTTTCCTCAATGCGTGGCAAGTAACCATCTACATTAGATAAAGAAAGGAGTTACTATTCCTCCTCCCTTT
CAGATACCCAACACATCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: PAS/PAC Domain-Containing Protein; Sensor Histidine Kinase; Two-Component Sensor Histidine Kinase; Sensor Protein DivL; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MFTYIAPYILVFVLAVFAIFSFYASLSMNDLKHNNNLLASLILSLGDGFYLWDEKKRVERFSPNLHILLNSVFCSFNELA
NFFEESDQLRKNFSEARRINKSFAIDLKGRDSEIYCFCHGQSIVDDQDRIVGVLLWIQNVTGGRSLISNLKKENARLSRS
LADYSDMVNALPYPIWKRSPSSDVEIHNPFYVKLMKDNKNGDIFTRQHATATHRDSENTALKEKIFMIVDNERRLYSLTE
ISTERGDFIGYGQDITQSWQLMEEIKGYTQMQKNILRSLPCAAAIYGSDGRLLFFNGHFSKFWQLEHLRTDKGATYSDII
RKIYESRKFIDDKAFELLKKQQYELFGKLSEPYHDTLTLKSGVLEISVVPNHRQELLFLYSHNQLKQSKN

Sequences:

>Translated_390_residues
MFTYIAPYILVFVLAVFAIFSFYASLSMNDLKHNNNLLASLILSLGDGFYLWDEKKRVERFSPNLHILLNSVFCSFNELA
NFFEESDQLRKNFSEARRINKSFAIDLKGRDSEIYCFCHGQSIVDDQDRIVGVLLWIQNVTGGRSLISNLKKENARLSRS
LADYSDMVNALPYPIWKRSPSSDVEIHNPFYVKLMKDNKNGDIFTRQHATATHRDSENTALKEKIFMIVDNERRLYSLTE
ISTERGDFIGYGQDITQSWQLMEEIKGYTQMQKNILRSLPCAAAIYGSDGRLLFFNGHFSKFWQLEHLRTDKGATYSDII
RKIYESRKFIDDKAFELLKKQQYELFGKLSEPYHDTLTLKSGVLEISVVPNHRQELLFLYSHNQLKQSKN
>Mature_390_residues
MFTYIAPYILVFVLAVFAIFSFYASLSMNDLKHNNNLLASLILSLGDGFYLWDEKKRVERFSPNLHILLNSVFCSFNELA
NFFEESDQLRKNFSEARRINKSFAIDLKGRDSEIYCFCHGQSIVDDQDRIVGVLLWIQNVTGGRSLISNLKKENARLSRS
LADYSDMVNALPYPIWKRSPSSDVEIHNPFYVKLMKDNKNGDIFTRQHATATHRDSENTALKEKIFMIVDNERRLYSLTE
ISTERGDFIGYGQDITQSWQLMEEIKGYTQMQKNILRSLPCAAAIYGSDGRLLFFNGHFSKFWQLEHLRTDKGATYSDII
RKIYESRKFIDDKAFELLKKQQYELFGKLSEPYHDTLTLKSGVLEISVVPNHRQELLFLYSHNQLKQSKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45368; Mature: 45368

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTYIAPYILVFVLAVFAIFSFYASLSMNDLKHNNNLLASLILSLGDGFYLWDEKKRVER
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCEEEECHHHHHHH
FSPNLHILLNSVFCSFNELANFFEESDQLRKNFSEARRINKSFAIDLKGRDSEIYCFCHG
HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECC
QSIVDDQDRIVGVLLWIQNVTGGRSLISNLKKENARLSRSLADYSDMVNALPYPIWKRSP
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSDVEIHNPFYVKLMKDNKNGDIFTRQHATATHRDSENTALKEKIFMIVDNERRLYSLTE
CCCCEECCCEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHEEEEEECCCCCEEEHHH
ISTERGDFIGYGQDITQSWQLMEEIKGYTQMQKNILRSLPCAAAIYGSDGRLLFFNGHFS
HCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCH
KFWQLEHLRTDKGATYSDIIRKIYESRKFIDDKAFELLKKQQYELFGKLSEPYHDTLTLK
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEEE
SGVLEISVVPNHRQELLFLYSHNQLKQSKN
CCCEEEEECCCCCHHEEEEEECCHHHCCCC
>Mature Secondary Structure
MFTYIAPYILVFVLAVFAIFSFYASLSMNDLKHNNNLLASLILSLGDGFYLWDEKKRVER
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCEEEECHHHHHHH
FSPNLHILLNSVFCSFNELANFFEESDQLRKNFSEARRINKSFAIDLKGRDSEIYCFCHG
HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECC
QSIVDDQDRIVGVLLWIQNVTGGRSLISNLKKENARLSRSLADYSDMVNALPYPIWKRSP
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSDVEIHNPFYVKLMKDNKNGDIFTRQHATATHRDSENTALKEKIFMIVDNERRLYSLTE
CCCCEECCCEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHEEEEEECCCCCEEEHHH
ISTERGDFIGYGQDITQSWQLMEEIKGYTQMQKNILRSLPCAAAIYGSDGRLLFFNGHFS
HCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCH
KFWQLEHLRTDKGATYSDIIRKIYESRKFIDDKAFELLKKQQYELFGKLSEPYHDTLTLK
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEEE
SGVLEISVVPNHRQELLFLYSHNQLKQSKN
CCCEEEEECCCCCHHEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA