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The map label for this gene is msp4 [H]

Identifier: 88607821

GI number: 88607821

Start: 1236593

End: 1237543

Strand: Reverse

Name: msp4 [H]

Synonym: APH_1169

Alternate gene names: 88607821

Gene position: 1237543-1236593 (Counterclockwise)

Preceding gene: 88606892

Following gene: 88607300

Centisome position: 84.11

GC content: 44.9

Gene sequence:

>951_bases
ATGCTTGTAGCTATGGAAGGCAGTGTTGGTTATGGTATTGGTGGTGCCAGGGTTGAGCTTGAGATTGGTTACGAGCGCTT
CAAGACCAAGGGTATTAGAGATAGTGGTAGTAAGGAAGATGATGCTGATACAGTATATCTACTAGCTAAGGAGTTAGCTT
ATGATGTTGTTACTGGACAGACTGATAACCTTGCTGCTGCTCTTGCCAAAACCTCAGGTAAGGACATCGTTCAGTTTGCT
AAGGCGGTGGAGATATCCTCCCCCACCATTGATGGGAAGATTTGTAAGATAAATACAGGAAGTAATAAATACGGCACTGG
AACAAATTCTGGAGAACTCACTTGTGGAGTTGGCCACGCGAGCGGATCTCTAGGAGCGGCGAACGGAGCCTTTAAGGATT
TTCGACAGCATGTGTTAGAAGTTGAAAGTCATAAACATTGGCCTACTACGCAGGGTTCTAGTGATAAAGGTAGTAATAAC
GCAACAAAGGTAGCCGGAGAACTAACAAAGCTCACCACAGAAGAAAAAACCATAGTAGCAGGGTTACTAGCTAAAACTAT
TGAAGGGGGAGAGGTTGTTGAAATCAGGGCTGTCTCTTCTACTTCTGTGATGGTTAATGCTTGTTATGACCTTCTTAGTG
AAGGTTTAGGTGTTGTTCCTTATGCCTGTGTTGGGCTCGGTGGTAACTTCGTGGGTGTTGTTGATGGGCATATCACTCCT
AAGCTTGCTTATAGGTTAAAGGCTGGCTTGAGTTATCAGCTCTCTCCTGAAATCTCTGCGTTTGCGGGTGGCTTTTACCA
TCGTGTTGTGGGAGATGGTGTTTATGATGATCTCCCGGCTCAACGTCTTGTAGATGATACTAGTCCGGCGGGTCGTACTA
AGGATACTGCTATTGCTAACTTCTCCATGGCTTATGTCGGTGGGGAATTTGGTGTTAGGTTTGCTTTTTAA

Upstream 100 bases:

>100_bases
GGCAGTATATCCATACTTAAAGGATGGAAAGAGTGTAAAGCTAGAGTCACACAAGTTTGACTGGAACACTCCTGATCCTC
GGATTGGGTTTAAGGACAAC

Downstream 100 bases:

>100_bases
GGTGGTTTGTTGGAAGCGGGGTAAGTCAAACTTACCCCGCTTCTATTAGGGAGTTAGTATATGAGATCTAGAAGTAAGCT
ATTTTTAGGAAGCGTAATGA

Product: P44-19 outer membrane protein, silent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDDADTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDIVQFA
KAVEISSPTIDGKICKINTGSNKYGTGTNSGELTCGVGHASGSLGAANGAFKDFRQHVLEVESHKHWPTTQGSSDKGSNN
ATKVAGELTKLTTEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITP
KLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGRTKDTAIANFSMAYVGGEFGVRFAF

Sequences:

>Translated_316_residues
MLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDDADTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDIVQFA
KAVEISSPTIDGKICKINTGSNKYGTGTNSGELTCGVGHASGSLGAANGAFKDFRQHVLEVESHKHWPTTQGSSDKGSNN
ATKVAGELTKLTTEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITP
KLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGRTKDTAIANFSMAYVGGEFGVRFAF
>Mature_316_residues
MLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDDADTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDIVQFA
KAVEISSPTIDGKICKINTGSNKYGTGTNSGELTCGVGHASGSLGAANGAFKDFRQHVLEVESHKHWPTTQGSSDKGSNN
ATKVAGELTKLTTEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITP
KLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGRTKDTAIANFSMAYVGGEFGVRFAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 33054; Mature: 33054

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDDADTVYLLAKELAYDVVTGQ
CEEEEECCCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
TDNLAAALAKTSGKDIVQFAKAVEISSPTIDGKICKINTGSNKYGTGTNSGELTCGVGHA
CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCC
SGSLGAANGAFKDFRQHVLEVESHKHWPTTQGSSDKGSNNATKVAGELTKLTTEEKTIVA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
GLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITP
HHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCH
KLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGRTKDTAIAN
HHHHHHHCCCCEEECCCHHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEEEE
FSMAYVGGEFGVRFAF
EEEEEECCCCCEEECC
>Mature Secondary Structure
MLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDDADTVYLLAKELAYDVVTGQ
CEEEEECCCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
TDNLAAALAKTSGKDIVQFAKAVEISSPTIDGKICKINTGSNKYGTGTNSGELTCGVGHA
CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCC
SGSLGAANGAFKDFRQHVLEVESHKHWPTTQGSSDKGSNNATKVAGELTKLTTEEKTIVA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
GLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITP
HHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCH
KLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGRTKDTAIAN
HHHHHHHCCCCEEECCCHHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEEEE
FSMAYVGGEFGVRFAF
EEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]