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The map label for this gene is p44-36 [H]

Identifier: 88607300

GI number: 88607300

Start: 1235432

End: 1236532

Strand: Reverse

Name: p44-36 [H]

Synonym: APH_1168

Alternate gene names: 88607300

Gene position: 1236532-1235432 (Counterclockwise)

Preceding gene: 88607821

Following gene: 88607355

Centisome position: 84.04

GC content: 45.59

Gene sequence:

>1101_bases
ATGAGATCTAGAAGTAAGCTATTTTTAGGAAGCGTAATGATGTCTATGGCTATAGTCATGGCTGGGAATGATGTCAGGGC
TCATGATGACGTTAGCGCTTTGGAGACTGGTGGTGCGGGATATTTCTATGTTGGTTTGGATTACAGTCCAGCGTTTAGCA
AGATAAGAGATTTTAGTATAAGGGAGAGTAACGGAGAGACTAAGGCAGTATATCCATACTTAAAGGATGGAAAGAGTGTA
AAGCTAGAGTCACACAAGTTTGACTGGAACACACCTGATCCTCGGATTGGGTTTAAGGACAACATGCTTGTAGCTATGGA
AGGCAGTGTTGGTTATGGTATTGGTGGTGCCAGGGTTGAGCTTGAGATTGGTTACGAGCGCTTCAAGACCAAGGGTATTA
GAGATAGTGGTAGTAAGGAAGATGAAGCTGATACAGTATATCTACTAGCTAAGGAGTTAGCTTATGATGTTGTTACTGGA
CAAACTGATAAGCTTACCGCTGCTCTTGCTAAGACCTCGGGGAAGGACTTTGTTCAGTTTGCTAAGGCGGTTGGGGTTTC
TCATCCCAGTATTGATGGGAAGGTTTGTAAGACGAAGAAGGAGGGATCGGGCAGTAACCAATTTGGGAAGTATGCTGGGG
AAACTGCTAATGGTTCCAGCGCTAGCAAAGCTGAGGTTGCAGTGTGTGGCGCTGCGGGTAACCACAGTAGCGGTGGCTCA
ACTGTCGCGGAGACTTTAAAGAACTTTGTCAGTGCAACCCTGAAAGGAGATGGTAGTAAGAACTGGCCCACATCTACGAT
AGCCGCGAGCAATGGGGGGACACCAACTCCTGTTACAAACGACAACGCCAAAGCCGTAGCTAAAGACCTAGTACAGGAGC
TAACCCCTGAAGAAAAAACCATAGTAGCAGGGTTGCTTGCTAAAACTATTGAAGGGGGTGAAGTTGTTGAGATCAGGGCG
GTTTCTTCTACTTCCGTAATGGTCAATGCTTGTTATGATCTTCTTAGTGAAGGTTTAGGCGTTGTTCCTTATGCTTGCGT
TGGTCTCGGTGGGAACTTTGTTGGCGTTGTTGATGGAATTCATTACACAAACCATCTTTAA

Upstream 100 bases:

>100_bases
TTATGTCGGTGGGGAATTTGGTGTTAGGTTTGCTTTTTAAGGTGGTTTGTTGGAAGCGGGGTAAGTCAAACTTACCCCGC
TTCTATTAGGGAGTTAGTAT

Downstream 100 bases:

>100_bases
CTCTGAATACCCTAGTTAAGGTAAGTGAAGTAACTAGACAAATTAGTGCTGCACCACTCGCGAAACAAACTACGATCAGC
GATTTGCCATACTTAGTAAG

Product: P44-36 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDKLTAALAKTSGKDFVQFAKAVGVSHPSIDGKVCKTKKEGSGSNQFGKYAGETANGSSASKAEVAVCGAAGNHSSGGS
TVAETLKNFVSATLKGDGSKNWPTSTIAASNGGTPTPVTNDNAKAVAKDLVQELTPEEKTIVAGLLAKTIEGGEVVEIRA
VSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGIHYTNHL

Sequences:

>Translated_366_residues
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDKLTAALAKTSGKDFVQFAKAVGVSHPSIDGKVCKTKKEGSGSNQFGKYAGETANGSSASKAEVAVCGAAGNHSSGGS
TVAETLKNFVSATLKGDGSKNWPTSTIAASNGGTPTPVTNDNAKAVAKDLVQELTPEEKTIVAGLLAKTIEGGEVVEIRA
VSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGIHYTNHL
>Mature_366_residues
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDKLTAALAKTSGKDFVQFAKAVGVSHPSIDGKVCKTKKEGSGSNQFGKYAGETANGSSASKAEVAVCGAAGNHSSGGS
TVAETLKNFVSATLKGDGSKNWPTSTIAASNGGTPTPVTNDNAKAVAKDLVQELTPEEKTIVAGLLAKTIEGGEVVEIRA
VSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGIHYTNHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 38420; Mature: 38420

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCHHHHHHHCCEE
RESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVE
ECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
LEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKTSGKDFVQF
EEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
AKAVGVSHPSIDGKVCKTKKEGSGSNQFGKYAGETANGSSASKAEVAVCGAAGNHSSGGS
HHHHCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCH
TVAETLKNFVSATLKGDGSKNWPTSTIAASNGGTPTPVTNDNAKAVAKDLVQELTPEEKT
HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
IVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGI
HHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCC
HYTNHL
HHHCCC
>Mature Secondary Structure
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECCCHHHHHHHCCEE
RESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVE
ECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
LEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKTSGKDFVQF
EEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
AKAVGVSHPSIDGKVCKTKKEGSGSNQFGKYAGETANGSSASKAEVAVCGAAGNHSSGGS
HHHHCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCH
TVAETLKNFVSATLKGDGSKNWPTSTIAASNGGTPTPVTNDNAKAVAKDLVQELTPEEKT
HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
IVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGI
HHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCC
HYTNHL
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]