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The map label for this gene is 88607765

Identifier: 88607765

GI number: 88607765

Start: 1374152

End: 1374595

Strand: Reverse

Name: 88607765

Synonym: APH_1307

Alternate gene names: NA

Gene position: 1374595-1374152 (Counterclockwise)

Preceding gene: 88607662

Following gene: 88607529

Centisome position: 93.43

GC content: 41.44

Gene sequence:

>444_bases
ATGCTTTTGTCTCGGGAGCTCCATAGGTGGTTGGAAGCATTTCATGTAATTTCAGTAGTTATGTGGATGGCGGGCATGCT
TTATCTTCCTAGGTTGTTTGTTTACCACGCAAATACGAAACCTGGTTCTGAGACCAGTGCTCTGCTCGCGACTATGGAAC
GTAGGTTATTGTTCTACATAATGAATCCAGCCATGGCGACTGCTATACTTTTAGGGCTTATCCTTGCTGTTACAAGCGAT
GCTCATTTGTTTGTGTGGTTTAGAATCAAGTCCGTATTGCTGGTCTGTATGATATACATGCACTGTCTTTTCGTGAAGTA
TAGGAAGGATTTCTCGTTGGATATACGGGTGCATTCTAGTTTTTTCTTTCGAGTGCTTAATGAAATAGTCACAGTTTTGC
TCATCGGTATAATAATTATGGCAGTGGTTAAGCCATTTCGTTGA

Upstream 100 bases:

>100_bases
TTACATAGAGAACTAAACTCTGGAAAAATTGTAGTTTTATTGCGTCGAGAATACATAATTGCTAACATATTGATAATTTT
TTAATCATTACCGGTGTGTT

Downstream 100 bases:

>100_bases
TGCGTACGATGCGTGTCTTAGGTTTGCTGATGACCCTGATAAAGTAACGTGCTAGGAAGTGTTGAGTCCGGGAGTTATTG
GGATTCTACTGTACGCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLLSRELHRWLEAFHVISVVMWMAGMLYLPRLFVYHANTKPGSETSALLATMERRLLFYIMNPAMATAILLGLILAVTSD
AHLFVWFRIKSVLLVCMIYMHCLFVKYRKDFSLDIRVHSSFFFRVLNEIVTVLLIGIIIMAVVKPFR

Sequences:

>Translated_147_residues
MLLSRELHRWLEAFHVISVVMWMAGMLYLPRLFVYHANTKPGSETSALLATMERRLLFYIMNPAMATAILLGLILAVTSD
AHLFVWFRIKSVLLVCMIYMHCLFVKYRKDFSLDIRVHSSFFFRVLNEIVTVLLIGIIIMAVVKPFR
>Mature_147_residues
MLLSRELHRWLEAFHVISVVMWMAGMLYLPRLFVYHANTKPGSETSALLATMERRLLFYIMNPAMATAILLGLILAVTSD
AHLFVWFRIKSVLLVCMIYMHCLFVKYRKDFSLDIRVHSSFFFRVLNEIVTVLLIGIIIMAVVKPFR

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 17125; Mature: 17125

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSRELHRWLEAFHVISVVMWMAGMLYLPRLFVYHANTKPGSETSALLATMERRLLFYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
MNPAMATAILLGLILAVTSDAHLFVWFRIKSVLLVCMIYMHCLFVKYRKDFSLDIRVHSS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHH
FFFRVLNEIVTVLLIGIIIMAVVKPFR
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLSRELHRWLEAFHVISVVMWMAGMLYLPRLFVYHANTKPGSETSALLATMERRLLFYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
MNPAMATAILLGLILAVTSDAHLFVWFRIKSVLLVCMIYMHCLFVKYRKDFSLDIRVHSS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHH
FFFRVLNEIVTVLLIGIIIMAVVKPFR
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]