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The map label for this gene is 88607743

Identifier: 88607743

GI number: 88607743

Start: 1383048

End: 1384076

Strand: Reverse

Name: 88607743

Synonym: APH_1316

Alternate gene names: NA

Gene position: 1384076-1383048 (Counterclockwise)

Preceding gene: 88607599

Following gene: 88607347

Centisome position: 94.07

GC content: 40.43

Gene sequence:

>1029_bases
ATGGGGTCTATATTATCGAAGATTTCTGCTGCTATTCCTGGTGTTGAAGAGATATTTAGACTGATGAAGCAAGGATGTCT
TTCAGTCAGAGAAAATACTTCGGCAATACGAGATAAAACCGGCAATTTACTTGCCACAAATATAGATCTAGGACTATATC
ATTTTTACCGTGGGAGCATATCTGATGCCAAAACGCGTTTTTGGTTGATTAGCTTGGTGCGTCCTCGTTTACCTGAAGTG
CACTACAACATTGGAAGATGTCACTTAGTGCTTAAGCGTTTTGATAGTGCTATAGTAAGTTTTAAGAAGGCGCTTTCTCT
TGATGGTAATCATAAGGAGGCACGTTACTACTTAAACAAAGTGCTTAGCCCAGAGTCAATTACAGAAGTTCCAGAAAATG
TGGTTAAGCAGTATTTTAACTACACCAGTGAGTATTTCGTTGAGCATTGGCTTATATCTAAGAATTACCGAGGGCATGAG
CATGTACGCTCTCTTGTGATGAATTTTTTTGATGATAGGCTGTCAGATATACGAATTTTAGATTTAGGTTGCGGAACAGG
GGTATGTGGCCAATTTCTCAAAATGCGTGATATAGGCAGTCACTTAACTGGGGTTGATATATCAAGAAGAATGCTCGACA
TAGCGCGGCAATGTTTTGTCTATGGCAAGCGAGCATATAATGCACTTGTATGTATAGGTATGCATGAGTTTCTGCGTGAT
AATACGGAGGAGTTTGACGTAATCATCATGACGGAAGTGCTTCACTACTTTGGGGATTTGAAAGAAATACTCACTTTAGT
GAGTAAGGCTCTTAGTTCCACAGGAATGGTGATAGGATTGGTGCGAGAAGCTGGTTCAAGCGGTTATCAGTTCATCAAGG
AAGGGGACTTCTTCTGCCACTCATCCAGTTACATATCACAAACTGTAGCGGCAACAGGATTTCGCTTAAGTTACATGAAT
CGCTGTGAGATTTATGGAGATAAGGTACAGGGATTGCTCTTTGCAATATCTAAGGACACAGAAGAGTAA

Upstream 100 bases:

>100_bases
TTTGTCCTAGGAAGCAGTTAAGATAGTACAGATGGGTCTGCGAAAAGTTTTTTGACTATGGTAAGCTATGAGGAATATTT
TTGCTTGTTGTAGTAGAGGA

Downstream 100 bases:

>100_bases
TGTGAGGGTGCTTATACATTCAACTTGGGCGCCTATATGGAGCTTATTCTGTAGACTTTATTGACAAGTAATTTACCTTT
TCATTATCATGATCAGGTAT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MGSILSKISAAIPGVEEIFRLMKQGCLSVRENTSAIRDKTGNLLATNIDLGLYHFYRGSISDAKTRFWLISLVRPRLPEV
HYNIGRCHLVLKRFDSAIVSFKKALSLDGNHKEARYYLNKVLSPESITEVPENVVKQYFNYTSEYFVEHWLISKNYRGHE
HVRSLVMNFFDDRLSDIRILDLGCGTGVCGQFLKMRDIGSHLTGVDISRRMLDIARQCFVYGKRAYNALVCIGMHEFLRD
NTEEFDVIIMTEVLHYFGDLKEILTLVSKALSSTGMVIGLVREAGSSGYQFIKEGDFFCHSSSYISQTVAATGFRLSYMN
RCEIYGDKVQGLLFAISKDTEE

Sequences:

>Translated_342_residues
MGSILSKISAAIPGVEEIFRLMKQGCLSVRENTSAIRDKTGNLLATNIDLGLYHFYRGSISDAKTRFWLISLVRPRLPEV
HYNIGRCHLVLKRFDSAIVSFKKALSLDGNHKEARYYLNKVLSPESITEVPENVVKQYFNYTSEYFVEHWLISKNYRGHE
HVRSLVMNFFDDRLSDIRILDLGCGTGVCGQFLKMRDIGSHLTGVDISRRMLDIARQCFVYGKRAYNALVCIGMHEFLRD
NTEEFDVIIMTEVLHYFGDLKEILTLVSKALSSTGMVIGLVREAGSSGYQFIKEGDFFCHSSSYISQTVAATGFRLSYMN
RCEIYGDKVQGLLFAISKDTEE
>Mature_341_residues
GSILSKISAAIPGVEEIFRLMKQGCLSVRENTSAIRDKTGNLLATNIDLGLYHFYRGSISDAKTRFWLISLVRPRLPEVH
YNIGRCHLVLKRFDSAIVSFKKALSLDGNHKEARYYLNKVLSPESITEVPENVVKQYFNYTSEYFVEHWLISKNYRGHEH
VRSLVMNFFDDRLSDIRILDLGCGTGVCGQFLKMRDIGSHLTGVDISRRMLDIARQCFVYGKRAYNALVCIGMHEFLRDN
TEEFDVIIMTEVLHYFGDLKEILTLVSKALSSTGMVIGLVREAGSSGYQFIKEGDFFCHSSSYISQTVAATGFRLSYMNR
CEIYGDKVQGLLFAISKDTEE

Specific function: Unknown

COG id: COG4976

COG function: function code R; Predicted methyltransferase (contains TPR repeat)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38892; Mature: 38761

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSILSKISAAIPGVEEIFRLMKQGCLSVRENTSAIRDKTGNLLATNIDLGLYHFYRGSI
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCHHHHHHHCCCC
SDAKTRFWLISLVRPRLPEVHYNIGRCHLVLKRFDSAIVSFKKALSLDGNHKEARYYLNK
CHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VLSPESITEVPENVVKQYFNYTSEYFVEHWLISKNYRGHEHVRSLVMNFFDDRLSDIRIL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEE
DLGCGTGVCGQFLKMRDIGSHLTGVDISRRMLDIARQCFVYGKRAYNALVCIGMHEFLRD
EECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCC
NTEEFDVIIMTEVLHYFGDLKEILTLVSKALSSTGMVIGLVREAGSSGYQFIKEGDFFCH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHHHHCCCCEEC
SSSYISQTVAATGFRLSYMNRCEIYGDKVQGLLFAISKDTEE
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
GSILSKISAAIPGVEEIFRLMKQGCLSVRENTSAIRDKTGNLLATNIDLGLYHFYRGSI
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCHHHHHHHCCCC
SDAKTRFWLISLVRPRLPEVHYNIGRCHLVLKRFDSAIVSFKKALSLDGNHKEARYYLNK
CHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VLSPESITEVPENVVKQYFNYTSEYFVEHWLISKNYRGHEHVRSLVMNFFDDRLSDIRIL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEE
DLGCGTGVCGQFLKMRDIGSHLTGVDISRRMLDIARQCFVYGKRAYNALVCIGMHEFLRD
EECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCC
NTEEFDVIIMTEVLHYFGDLKEILTLVSKALSSTGMVIGLVREAGSSGYQFIKEGDFFCH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHHHHCCCCEEC
SSSYISQTVAATGFRLSYMNRCEIYGDKVQGLLFAISKDTEE
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]