| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is pstS [H]
Identifier: 88607657
GI number: 88607657
Start: 1113986
End: 1115005
Strand: Direct
Name: pstS [H]
Synonym: APH_1050
Alternate gene names: 88607657
Gene position: 1113986-1115005 (Clockwise)
Preceding gene: 88607263
Following gene: 88606718
Centisome position: 75.72
GC content: 39.41
Gene sequence:
>1020_bases ATGGAGATTGTTCGCTTTGTATTTTTTTTAGCGTGTGCGTTAATTTCCTTGGAAGTACGGGCTGATCACATAAGGGTTGT TGGTTCATCTTCTGTATTTCCGTTCATTTCTTCCATAGCTGAAGAATTTGGAAGGTTTTCCTCTTATAGAACTCCTGTAA TAGAGTCTGTAGGCAGTGGGATGGGGTTTAATATGTTTTGCGCGGGCGCAAATCCTGGAACTCCTGATGTCGCAATGTCT TCAAGAAAGATAAAGGATGCTGAGCTGGCTTTATGCGCTTCCAACGGTGTACATGACGTTATAGAAATTGGGCTTGGCTA TGACGGTATAGTAATTGCAAGCTCGCGACAAAAAGCTCAAATCGATCTTCGCTTGAAAGATTTATACAGTGCACTCAGTA AATACAGTCTTACGGATGAATATGGGCAAATCCCGATGAATAAGTATGGAAAATGGTCAGAGATACGCTCTGATCTGCCT GAGCACGATATTGAGGTCTATGGACCGCATAAGAATGCTGGAACTTATGATATTCTTCTAGATTATGTAGTTAGGGCAGT TTGCGTCAGTGCAAAGAATTTTGTTGATACATATCATGACGTTGAGGAAAGAAAAAGTATCTGCAGTGAGATTAGAAATG ATGGTAAGTACATTGAGGTAGCGACAAGTGAGAATGTAATTATTCAAAAAGTTTCTAAGAATAGCAGTGCTTTTGGTATC TTGAGTTTTAGCTTTTTGATAAAAAATCAGAATGAGGTTCAGGGAAATAAAGTTGCTGGGGTTGAGCCGACTTATGAAAC CATTGCCTCAGGTAAGTATGTTTTATCAAGGCCTATGTACATATATGTTAAGAAAGAGCATCTCAATACCACTGCTGGCC TTCGGGAGTTCATAAAAGAGGTGTTACGTCCTGAATCAATCGGCAGTGGAGGTTATCTAGTAAATTTAGGCTTTATTCCC TTAACAGAAGAGAAGTTACAAGAAACTCGAAGTGTTGTAGAGAAGTTAATTGCCGAATAA
Upstream 100 bases:
>100_bases GTCAAGTAGGTAGACTTTTTGATTTCGTTAATAAGTACCTTAATTCTTAGTTAGGGTTATGGTGTTATAGTCTTGTGTTA GCTTTGGTACAACCATGAGA
Downstream 100 bases:
>100_bases AGCGCTTCTGCTCTAGCTATGGCTTATTCTGCATCGGTGAGAAAAGGTTTGACCACGTGGTTTGTTGTGCTATCATTCTG GACTGTGCGTTTTATTCTTT
Product: putative phosphate ABC transporter, periplasmic phosphate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MEIVRFVFFLACALISLEVRADHIRVVGSSSVFPFISSIAEEFGRFSSYRTPVIESVGSGMGFNMFCAGANPGTPDVAMS SRKIKDAELALCASNGVHDVIEIGLGYDGIVIASSRQKAQIDLRLKDLYSALSKYSLTDEYGQIPMNKYGKWSEIRSDLP EHDIEVYGPHKNAGTYDILLDYVVRAVCVSAKNFVDTYHDVEERKSICSEIRNDGKYIEVATSENVIIQKVSKNSSAFGI LSFSFLIKNQNEVQGNKVAGVEPTYETIASGKYVLSRPMYIYVKKEHLNTTAGLREFIKEVLRPESIGSGGYLVNLGFIP LTEEKLQETRSVVEKLIAE
Sequences:
>Translated_339_residues MEIVRFVFFLACALISLEVRADHIRVVGSSSVFPFISSIAEEFGRFSSYRTPVIESVGSGMGFNMFCAGANPGTPDVAMS SRKIKDAELALCASNGVHDVIEIGLGYDGIVIASSRQKAQIDLRLKDLYSALSKYSLTDEYGQIPMNKYGKWSEIRSDLP EHDIEVYGPHKNAGTYDILLDYVVRAVCVSAKNFVDTYHDVEERKSICSEIRNDGKYIEVATSENVIIQKVSKNSSAFGI LSFSFLIKNQNEVQGNKVAGVEPTYETIASGKYVLSRPMYIYVKKEHLNTTAGLREFIKEVLRPESIGSGGYLVNLGFIP LTEEKLQETRSVVEKLIAE >Mature_339_residues MEIVRFVFFLACALISLEVRADHIRVVGSSSVFPFISSIAEEFGRFSSYRTPVIESVGSGMGFNMFCAGANPGTPDVAMS SRKIKDAELALCASNGVHDVIEIGLGYDGIVIASSRQKAQIDLRLKDLYSALSKYSLTDEYGQIPMNKYGKWSEIRSDLP EHDIEVYGPHKNAGTYDILLDYVVRAVCVSAKNFVDTYHDVEERKSICSEIRNDGKYIEVATSENVIIQKVSKNSSAFGI LSFSFLIKNQNEVQGNKVAGVEPTYETIASGKYVLSRPMYIYVKKEHLNTTAGLREFIKEVLRPESIGSGGYLVNLGFIP LTEEKLQETRSVVEKLIAE
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37591; Mature: 37591
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIVRFVFFLACALISLEVRADHIRVVGSSSVFPFISSIAEEFGRFSSYRTPVIESVGSG CHHHHHHHHHHHHHHHHHEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCC MGFNMFCAGANPGTPDVAMSSRKIKDAELALCASNGVHDVIEIGLGYDGIVIASSRQKAQ CCCEEEEECCCCCCCCHHCCCCCCCHHHEEEECCCCCHHHHHHCCCCCCEEEECCCCCCE IDLRLKDLYSALSKYSLTDEYGQIPMNKYGKWSEIRSDLPEHDIEVYGPHKNAGTYDILL EEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCHHHHHH DYVVRAVCVSAKNFVDTYHDVEERKSICSEIRNDGKYIEVATSENVIIQKVSKNSSAFGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCEEEE LSFSFLIKNQNEVQGNKVAGVEPTYETIASGKYVLSRPMYIYVKKEHLNTTAGLREFIKE EEEEEEECCCCCCCCCEECCCCCHHHHHHCCCEEEECCEEEEEEHHHCCCHHHHHHHHHH VLRPESIGSGGYLVNLGFIPLTEEKLQETRSVVEKLIAE HHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEIVRFVFFLACALISLEVRADHIRVVGSSSVFPFISSIAEEFGRFSSYRTPVIESVGSG CHHHHHHHHHHHHHHHHHEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCC MGFNMFCAGANPGTPDVAMSSRKIKDAELALCASNGVHDVIEIGLGYDGIVIASSRQKAQ CCCEEEEECCCCCCCCHHCCCCCCCHHHEEEECCCCCHHHHHHCCCCCCEEEECCCCCCE IDLRLKDLYSALSKYSLTDEYGQIPMNKYGKWSEIRSDLPEHDIEVYGPHKNAGTYDILL EEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCHHHHHH DYVVRAVCVSAKNFVDTYHDVEERKSICSEIRNDGKYIEVATSENVIIQKVSKNSSAFGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCEEEE LSFSFLIKNQNEVQGNKVAGVEPTYETIASGKYVLSRPMYIYVKKEHLNTTAGLREFIKE EEEEEEECCCCCCCCCEECCCCCHHHHHHCCCEEEECCEEEEEEHHHCCCHHHHHHHHHH VLRPESIGSGGYLVNLGFIPLTEEKLQETRSVVEKLIAE HHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA