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The map label for this gene is 88607521

Identifier: 88607521

GI number: 88607521

Start: 900241

End: 903051

Strand: Reverse

Name: 88607521

Synonym: APH_0849

Alternate gene names: NA

Gene position: 903051-900241 (Counterclockwise)

Preceding gene: 88607597

Following gene: 88607308

Centisome position: 61.38

GC content: 39.63

Gene sequence:

>2811_bases
GTGGATTGCCGGAAAATTGACACTGTTGTTGTGCCCAATCGCAGTGATGCAGAATGCTTACAATTCTACTTTTCAAAGCA
ATGCGGAATAGAAGATAACATAGAGGTTTTGGCGTTTTCAGAAATTGTCAAGAGCGCATACGAGGATGATATAGAAGCCC
GCGCAGGAGCACTGTTGTTATGCATGCAGTTTATAGAAGAATGGAATGCACTGCGCCATACAGACTATCCTGCAAGTTTG
GCAAAAGAATTACTTTTGATGCTTGATGAAATCTATCTTAACTGTACTGATTTGGATCGATTGAGCACATCGTTAGAGGA
GGAAGATCTCTTTGGGTACCGGTGTTTAACTTCAGAATTTTTAATCGACTTTGCCCGGTGGTGGAAAAGTACAGGGCATA
GTAATGCATCAGCTATTGCACAAGTTGAAAGATTCTTCTCAGAATTGTGTTTATCAGGAAAGAAAGTTGCGGTGGCAGGC
ATAGCCTCTAATAGAGCATTTTCAGAACTTTTACGGTCAATTTTCGAGAGTATCTCCGAGAGCTTTATCATACTGCCAGA
CTTAGATTTGGAAATGCCTGAGAATAAATGGAAAACTCTGGAAATGGGGCATTATCAGTACCGTTTTATGAAGCTGCTTG
ATGAATTAGGAATAGGCAGAGAAGAAGTGAGTATTCTTGATCAACGGGATAAAAACCATCTCGTTGATCTAGCATTCAAT
TTTGAAATACCCAGCCTATCAGATGAGCGATACTGCCACATTAAGGAGCAACAAAACATTGAATTAGTGATATGTGGCTC
AGAAAATGAAGAAGCGCGCAAGGTTATAGAGATTGCACAACGGTATTGTTGTGCGTCAGGGAATGATAGAGACGTATTTT
GCGGCACCGAAAAAAATGCAAATAACGCGGTATCAACCAATAATACGGCATCAAGTAGTGCGCTAAATAACAATATAGCA
CTTTCTCAGTATGCGTCGGAGATCGCAGGCTATACACGGTCTATCCAGGGGGCATGTACGGTATTTTTAGGGAGTGATTC
TTTATCGTCTAGAATATACTCTACTTTGTCATTGAGGGATACAGAGGAAGTTCGGTGCGATGATGAGCATGTTATTTCGA
CTCTTATGCTATGTGTTATAGAGGTTGTGGTATCAGAAGGCGATGCAGCGCACCTTTTGTCAATGATAAAACACGGCATG
GTAACAATAGGCTATGAGGATAAAGAAGCATATGGGGCAGCAGTTTGTCAATTCGAAACAGAAATAATAAGAAAGCACGC
CGTTTCAGGCTTTGAAGCAATTACTCATGCTGTATATGAAGTAGGAAGCGCAGAATCAAGGGAATATTGGCGCAGAGTAG
TAGAAGCGATTGGGCCATTTATGGAACTAGATGGTAAACATTCTTTAGGCGAAATAATACAGGCCCATTTGAAAAGTATT
AGGAATCTAGTTGGGGGAAATTCTGCATACGTTAAGAGGGATAACTGTGATGGAATCTTTGAGAATATAGAAGCATTCTT
TAGAAACCTTACGGCCTACTGTAAGGGTAAGAAGATATTCACCGTACGCAACTATAAGCACATATGCAAGGATCTCTTGG
AGTGTTATTTTAAGGATGCAAGGAACGATATATTCTCAGTGGGTTCAGTCAGGAGCGAAGTTGTAATTATATCTGGTTTT
AACGAAGGAGGGTTTGCTCCGGTAAGACGAAGTTCATTACTCAACAATACCATCAGAAAAAAGCTAAAGATACCCACTGA
TGAAGGGTATAAAGGCATCTTCTTAAGTATATTGTATAATCTCTTTCATGCGAAACGTCTTTATATCACTAGATCAGTTG
AAAGTTGTGGTAAAGTCACTGAAGCGCCACTTCTCATTAGGTACTTAGACTTTTTGTTATCATCTTTTTCCAATGCGTCT
AAATCTTCTTCTGACAGTACAGTTTCTTCTGTAGATTTAAACATAGATAAATCCGCTTATCTCAGTAAGTTTCTTTGTGA
ACCTAATCCTAAGCTTGAAGTTAGGAGCCAGGTGTTTTCTGTATTAACTGCTGAGGCTTTGGGGATGCTGATTAGCAATC
CTTACGCTTTCTATTCACGTTATGTTTTAGGCATCTATCCTGTAAAATCAGTAAATACCGGGAATATGGCGAAAAATTTT
GCCGTTACAGTACGCAGTATATTTCTGCAATACTTAAAAAATATGGGCCTTGGCAGCGATTATAGCGCTCTGATAGATAT
CGCAAAGAGAGAGTTTGCTACTGTATGCAAGAGCTATCCGTACATTGAAAAATTATGGTGGCCAAGGTTTGAAGCGATGG
CAGAGAATTTTTTTCAGGCCGATAGAGAAAGAAAATGTAACGTCTCTGCAATAGAAGTGGAGTCTGATTTTACTTGGGAT
GTAAGCGAGGGAATAAAGGTCATATCAAAGTGCGATAGTGTTTCGTATTTGAGGGATGGATCTCCATTGGTGGTATGTTA
CAAAATTGGTATGGTACCTTCTCAAGTTGACATACAGTGCGGATTTGCGTCTAGGGGCATAATTGACTCTATATGTGTTT
CAGAAAGCAATGAGAAGAAAGATGCGTCTTTTGCGTACTGGAGAATTACACCGGAATCTGTAGAAATTACAGAGATTAAA
GATCTTCCTGATGTTATAAAGGCTGCAAAGGAAGGGCTACAGAACTTTTTGGTAAAATTTCAGGAAGAAATGATACCATT
TTACCCCCGTGAAGATTTTTCTAAGTTTGTGGAATATGAGCTTTTTTCCAGAATCAGAGAAAAGATACCACAATATGGCA
GGCCGTATTAG

Upstream 100 bases:

>100_bases
CTGAATTTGCACAGGTCTGTATGTGAATTTGGGTAATGTGAGCGGTAGGATATTTGTAGTCCACAGTAGCGAACTATTTT
GGGAAGTCGTCGCTAAATTT

Downstream 100 bases:

>100_bases
TGCGTAAAACAGAAAATAGAGTGATGGGGATGATCAGAAGGTATTTATCTTCTTAGTTTACGCAATTGATTCATGTAAAT
TATTTAGTATATATGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 936; Mature: 936

Protein sequence:

>936_residues
MDCRKIDTVVVPNRSDAECLQFYFSKQCGIEDNIEVLAFSEIVKSAYEDDIEARAGALLLCMQFIEEWNALRHTDYPASL
AKELLLMLDEIYLNCTDLDRLSTSLEEEDLFGYRCLTSEFLIDFARWWKSTGHSNASAIAQVERFFSELCLSGKKVAVAG
IASNRAFSELLRSIFESISESFIILPDLDLEMPENKWKTLEMGHYQYRFMKLLDELGIGREEVSILDQRDKNHLVDLAFN
FEIPSLSDERYCHIKEQQNIELVICGSENEEARKVIEIAQRYCCASGNDRDVFCGTEKNANNAVSTNNTASSSALNNNIA
LSQYASEIAGYTRSIQGACTVFLGSDSLSSRIYSTLSLRDTEEVRCDDEHVISTLMLCVIEVVVSEGDAAHLLSMIKHGM
VTIGYEDKEAYGAAVCQFETEIIRKHAVSGFEAITHAVYEVGSAESREYWRRVVEAIGPFMELDGKHSLGEIIQAHLKSI
RNLVGGNSAYVKRDNCDGIFENIEAFFRNLTAYCKGKKIFTVRNYKHICKDLLECYFKDARNDIFSVGSVRSEVVIISGF
NEGGFAPVRRSSLLNNTIRKKLKIPTDEGYKGIFLSILYNLFHAKRLYITRSVESCGKVTEAPLLIRYLDFLLSSFSNAS
KSSSDSTVSSVDLNIDKSAYLSKFLCEPNPKLEVRSQVFSVLTAEALGMLISNPYAFYSRYVLGIYPVKSVNTGNMAKNF
AVTVRSIFLQYLKNMGLGSDYSALIDIAKREFATVCKSYPYIEKLWWPRFEAMAENFFQADRERKCNVSAIEVESDFTWD
VSEGIKVISKCDSVSYLRDGSPLVVCYKIGMVPSQVDIQCGFASRGIIDSICVSESNEKKDASFAYWRITPESVEITEIK
DLPDVIKAAKEGLQNFLVKFQEEMIPFYPREDFSKFVEYELFSRIREKIPQYGRPY

Sequences:

>Translated_936_residues
MDCRKIDTVVVPNRSDAECLQFYFSKQCGIEDNIEVLAFSEIVKSAYEDDIEARAGALLLCMQFIEEWNALRHTDYPASL
AKELLLMLDEIYLNCTDLDRLSTSLEEEDLFGYRCLTSEFLIDFARWWKSTGHSNASAIAQVERFFSELCLSGKKVAVAG
IASNRAFSELLRSIFESISESFIILPDLDLEMPENKWKTLEMGHYQYRFMKLLDELGIGREEVSILDQRDKNHLVDLAFN
FEIPSLSDERYCHIKEQQNIELVICGSENEEARKVIEIAQRYCCASGNDRDVFCGTEKNANNAVSTNNTASSSALNNNIA
LSQYASEIAGYTRSIQGACTVFLGSDSLSSRIYSTLSLRDTEEVRCDDEHVISTLMLCVIEVVVSEGDAAHLLSMIKHGM
VTIGYEDKEAYGAAVCQFETEIIRKHAVSGFEAITHAVYEVGSAESREYWRRVVEAIGPFMELDGKHSLGEIIQAHLKSI
RNLVGGNSAYVKRDNCDGIFENIEAFFRNLTAYCKGKKIFTVRNYKHICKDLLECYFKDARNDIFSVGSVRSEVVIISGF
NEGGFAPVRRSSLLNNTIRKKLKIPTDEGYKGIFLSILYNLFHAKRLYITRSVESCGKVTEAPLLIRYLDFLLSSFSNAS
KSSSDSTVSSVDLNIDKSAYLSKFLCEPNPKLEVRSQVFSVLTAEALGMLISNPYAFYSRYVLGIYPVKSVNTGNMAKNF
AVTVRSIFLQYLKNMGLGSDYSALIDIAKREFATVCKSYPYIEKLWWPRFEAMAENFFQADRERKCNVSAIEVESDFTWD
VSEGIKVISKCDSVSYLRDGSPLVVCYKIGMVPSQVDIQCGFASRGIIDSICVSESNEKKDASFAYWRITPESVEITEIK
DLPDVIKAAKEGLQNFLVKFQEEMIPFYPREDFSKFVEYELFSRIREKIPQYGRPY
>Mature_936_residues
MDCRKIDTVVVPNRSDAECLQFYFSKQCGIEDNIEVLAFSEIVKSAYEDDIEARAGALLLCMQFIEEWNALRHTDYPASL
AKELLLMLDEIYLNCTDLDRLSTSLEEEDLFGYRCLTSEFLIDFARWWKSTGHSNASAIAQVERFFSELCLSGKKVAVAG
IASNRAFSELLRSIFESISESFIILPDLDLEMPENKWKTLEMGHYQYRFMKLLDELGIGREEVSILDQRDKNHLVDLAFN
FEIPSLSDERYCHIKEQQNIELVICGSENEEARKVIEIAQRYCCASGNDRDVFCGTEKNANNAVSTNNTASSSALNNNIA
LSQYASEIAGYTRSIQGACTVFLGSDSLSSRIYSTLSLRDTEEVRCDDEHVISTLMLCVIEVVVSEGDAAHLLSMIKHGM
VTIGYEDKEAYGAAVCQFETEIIRKHAVSGFEAITHAVYEVGSAESREYWRRVVEAIGPFMELDGKHSLGEIIQAHLKSI
RNLVGGNSAYVKRDNCDGIFENIEAFFRNLTAYCKGKKIFTVRNYKHICKDLLECYFKDARNDIFSVGSVRSEVVIISGF
NEGGFAPVRRSSLLNNTIRKKLKIPTDEGYKGIFLSILYNLFHAKRLYITRSVESCGKVTEAPLLIRYLDFLLSSFSNAS
KSSSDSTVSSVDLNIDKSAYLSKFLCEPNPKLEVRSQVFSVLTAEALGMLISNPYAFYSRYVLGIYPVKSVNTGNMAKNF
AVTVRSIFLQYLKNMGLGSDYSALIDIAKREFATVCKSYPYIEKLWWPRFEAMAENFFQADRERKCNVSAIEVESDFTWD
VSEGIKVISKCDSVSYLRDGSPLVVCYKIGMVPSQVDIQCGFASRGIIDSICVSESNEKKDASFAYWRITPESVEITEIK
DLPDVIKAAKEGLQNFLVKFQEEMIPFYPREDFSKFVEYELFSRIREKIPQYGRPY

Specific function: Unknown

COG id: COG2887

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 105954; Mature: 105954

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCRKIDTVVVPNRSDAECLQFYFSKQCGIEDNIEVLAFSEIVKSAYEDDIEARAGALLL
CCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CMQFIEEWNALRHTDYPASLAKELLLMLDEIYLNCTDLDRLSTSLEEEDLFGYRCLTSEF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCHHHHHHHHH
LIDFARWWKSTGHSNASAIAQVERFFSELCLSGKKVAVAGIASNRAFSELLRSIFESISE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCC
SFIILPDLDLEMPENKWKTLEMGHYQYRFMKLLDELGIGREEVSILDQRDKNHLVDLAFN
CEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEE
FEIPSLSDERYCHIKEQQNIELVICGSENEEARKVIEIAQRYCCASGNDRDVFCGTEKNA
CCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
NNAVSTNNTASSSALNNNIALSQYASEIAGYTRSIQGACTVFLGSDSLSSRIYSTLSLRD
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCC
TEEVRCDDEHVISTLMLCVIEVVVSEGDAAHLLSMIKHGMVTIGYEDKEAYGAAVCQFET
CHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
EIIRKHAVSGFEAITHAVYEVGSAESREYWRRVVEAIGPFMELDGKHSLGEIIQAHLKSI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHH
RNLVGGNSAYVKRDNCDGIFENIEAFFRNLTAYCKGKKIFTVRNYKHICKDLLECYFKDA
HHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHH
RNDIFSVGSVRSEVVIISGFNEGGFAPVRRSSLLNNTIRKKLKIPTDEGYKGIFLSILYN
HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LFHAKRLYITRSVESCGKVTEAPLLIRYLDFLLSSFSNASKSSSDSTVSSVDLNIDKSAY
HHHHHHHHEECCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHH
LSKFLCEPNPKLEVRSQVFSVLTAEALGMLISNPYAFYSRYVLGIYPVKSVNTGNMAKNF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCHHHH
AVTVRSIFLQYLKNMGLGSDYSALIDIAKREFATVCKSYPYIEKLWWPRFEAMAENFFQA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHH
DRERKCNVSAIEVESDFTWDVSEGIKVISKCDSVSYLRDGSPLVVCYKIGMVPSQVDIQC
HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCCEEEEE
GFASRGIIDSICVSESNEKKDASFAYWRITPESVEITEIKDLPDVIKAAKEGLQNFLVKF
CCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCEEEHHHHCHHHHHHHHHHHHHHHHHHH
QEEMIPFYPREDFSKFVEYELFSRIREKIPQYGRPY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDCRKIDTVVVPNRSDAECLQFYFSKQCGIEDNIEVLAFSEIVKSAYEDDIEARAGALLL
CCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CMQFIEEWNALRHTDYPASLAKELLLMLDEIYLNCTDLDRLSTSLEEEDLFGYRCLTSEF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCHHHHHHHHH
LIDFARWWKSTGHSNASAIAQVERFFSELCLSGKKVAVAGIASNRAFSELLRSIFESISE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCC
SFIILPDLDLEMPENKWKTLEMGHYQYRFMKLLDELGIGREEVSILDQRDKNHLVDLAFN
CEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEE
FEIPSLSDERYCHIKEQQNIELVICGSENEEARKVIEIAQRYCCASGNDRDVFCGTEKNA
CCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
NNAVSTNNTASSSALNNNIALSQYASEIAGYTRSIQGACTVFLGSDSLSSRIYSTLSLRD
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCC
TEEVRCDDEHVISTLMLCVIEVVVSEGDAAHLLSMIKHGMVTIGYEDKEAYGAAVCQFET
CHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
EIIRKHAVSGFEAITHAVYEVGSAESREYWRRVVEAIGPFMELDGKHSLGEIIQAHLKSI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHH
RNLVGGNSAYVKRDNCDGIFENIEAFFRNLTAYCKGKKIFTVRNYKHICKDLLECYFKDA
HHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHH
RNDIFSVGSVRSEVVIISGFNEGGFAPVRRSSLLNNTIRKKLKIPTDEGYKGIFLSILYN
HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LFHAKRLYITRSVESCGKVTEAPLLIRYLDFLLSSFSNASKSSSDSTVSSVDLNIDKSAY
HHHHHHHHEECCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHH
LSKFLCEPNPKLEVRSQVFSVLTAEALGMLISNPYAFYSRYVLGIYPVKSVNTGNMAKNF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCHHHH
AVTVRSIFLQYLKNMGLGSDYSALIDIAKREFATVCKSYPYIEKLWWPRFEAMAENFFQA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHH
DRERKCNVSAIEVESDFTWDVSEGIKVISKCDSVSYLRDGSPLVVCYKIGMVPSQVDIQC
HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCCEEEEE
GFASRGIIDSICVSESNEKKDASFAYWRITPESVEITEIKDLPDVIKAAKEGLQNFLVKF
CCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCEEEHHHHCHHHHHHHHHHHHHHHHHHH
QEEMIPFYPREDFSKFVEYELFSRIREKIPQYGRPY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA