| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607491
Identifier: 88607491
GI number: 88607491
Start: 891462
End: 892796
Strand: Direct
Name: 88607491
Synonym: APH_0842
Alternate gene names: NA
Gene position: 891462-892796 (Clockwise)
Preceding gene: 88607010
Following gene: 88607000
Centisome position: 60.59
GC content: 45.02
Gene sequence:
>1335_bases ATGCATTCTTCGATGGTTTATGAGTCAAAAACCTACAGAGTTTATAGTCGCGTAGTAGATGAGATAAAGAATGGAAAGCT CACGCATCGGGCTGTTTCTGTGTATCTCAGCTGGTTATTGGAAAAGTCTATATCAAAGTTGCAAGAAGTGGTAGAAACCT CTGAGGAAGAGCCTCATCCATTACTTCAGACAGCTTTGGATAATTTAGAGAAGGCGTACAATGATCTTTGTCTAGCACGG GAGGGTACCGCAGATGATATAAAACAGGTGCTAGTTGATGAAAACTATAGTTACATAGACAATTTACAGATTGCGTTGCT ATGTCTTTCTAAGTGCCGTCATGGGTTAATGCCGATGCAAGGCGAAGCAGGAGAACATGCCGCGGCCATAAGTGCTGCAT CTACTAACATTGCCTCAGCTTTGTGTATTTTGCAAGATAATGCACATCCCGTGGAAAAGAACACCGATGATACTAGAGCA CGACTGTGCGGGTATTTAGATTCATTAGTGGATCTAGTTGAGTCTCTTCCAGAAGATGCTTTTCTATGCGTTACTCAAGG GGTTGGTGAGTACGACTTTGCCGTCAATTCTACTGCAAAGGCATCGTTACTACTCTCCCTAGAGGAGCTTCGTGCCATAG CCTCTACAATAGATCATATGGCTGATGACTTAAGTCGCGAGTGTATTCAGAAAAGTTTTGCAGCTGTGCTCGCACCTGTA AAAGTGATGATCTCAATACTTTCCCAAGCACCTGATATTCGTGCTCAAACAGCATTACATTGCCTGCTCGCTAACCGTCT CATAGAAAATAGTGAGAAAGCTATCGAAGGATATACTCAGGATCAACACACTAGTGATAAGGAGATGAATGCCGAGGATG TTATCTCTTCTGCTACATTGTGTACTGCAGGATCTGCACTGAGGTTGCTTGCTAGCTGCGCGAATAATGCTCCTGCATTT CCTCCATGCACTACAGATATTGTCAAGTGTGCGGGTCAGCTTGTTAAGAGCTACTATAAGTCATGCTGCTATAACCGGCA TAGTGAATACAGTAGTGATGCTGAGGCTAACCTCCATTTTGGTGATGTTCTTGGGTGCTTATGTGCTGCGCGGGAATCTC TTGATGGAGTAGATGCGTCTGCCTTACCGAGTAATCGCGATCGTGAGGCGTTAGCTAGACTGCGTAACGGAATAATGCGT GCTTCAGAGCGTTGCGTCGCAGAACAAGTTGCTGAACCTGATCTTATCGAACCAGCACCTGGTGCAGGATGGGATGCCCT ATCGGTTGAGGAAGTTGCACCAACCGCTGCTACCGCACCTTCTTTATACATTTAG
Upstream 100 bases:
>100_bases AAACCGGCAATTGTTGAAAGCTATAACACGAATGTTATTCCCTTGAAAGTTACATGACACGCATGATATATGTGGGCATA TGTGTTACGGTAGTGTTGTT
Downstream 100 bases:
>100_bases TAGTTGTAGAGCTGTTGCGTGGTATTGCTGTGCGCATCTCAAAGGTGCGCACAATGGTTTGAGCATAGTAAGGGCCGTTT TCCGACGGCAAATTTCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MHSSMVYESKTYRVYSRVVDEIKNGKLTHRAVSVYLSWLLEKSISKLQEVVETSEEEPHPLLQTALDNLEKAYNDLCLAR EGTADDIKQVLVDENYSYIDNLQIALLCLSKCRHGLMPMQGEAGEHAAAISAASTNIASALCILQDNAHPVEKNTDDTRA RLCGYLDSLVDLVESLPEDAFLCVTQGVGEYDFAVNSTAKASLLLSLEELRAIASTIDHMADDLSRECIQKSFAAVLAPV KVMISILSQAPDIRAQTALHCLLANRLIENSEKAIEGYTQDQHTSDKEMNAEDVISSATLCTAGSALRLLASCANNAPAF PPCTTDIVKCAGQLVKSYYKSCCYNRHSEYSSDAEANLHFGDVLGCLCAARESLDGVDASALPSNRDREALARLRNGIMR ASERCVAEQVAEPDLIEPAPGAGWDALSVEEVAPTAATAPSLYI
Sequences:
>Translated_444_residues MHSSMVYESKTYRVYSRVVDEIKNGKLTHRAVSVYLSWLLEKSISKLQEVVETSEEEPHPLLQTALDNLEKAYNDLCLAR EGTADDIKQVLVDENYSYIDNLQIALLCLSKCRHGLMPMQGEAGEHAAAISAASTNIASALCILQDNAHPVEKNTDDTRA RLCGYLDSLVDLVESLPEDAFLCVTQGVGEYDFAVNSTAKASLLLSLEELRAIASTIDHMADDLSRECIQKSFAAVLAPV KVMISILSQAPDIRAQTALHCLLANRLIENSEKAIEGYTQDQHTSDKEMNAEDVISSATLCTAGSALRLLASCANNAPAF PPCTTDIVKCAGQLVKSYYKSCCYNRHSEYSSDAEANLHFGDVLGCLCAARESLDGVDASALPSNRDREALARLRNGIMR ASERCVAEQVAEPDLIEPAPGAGWDALSVEEVAPTAATAPSLYI >Mature_444_residues MHSSMVYESKTYRVYSRVVDEIKNGKLTHRAVSVYLSWLLEKSISKLQEVVETSEEEPHPLLQTALDNLEKAYNDLCLAR EGTADDIKQVLVDENYSYIDNLQIALLCLSKCRHGLMPMQGEAGEHAAAISAASTNIASALCILQDNAHPVEKNTDDTRA RLCGYLDSLVDLVESLPEDAFLCVTQGVGEYDFAVNSTAKASLLLSLEELRAIASTIDHMADDLSRECIQKSFAAVLAPV KVMISILSQAPDIRAQTALHCLLANRLIENSEKAIEGYTQDQHTSDKEMNAEDVISSATLCTAGSALRLLASCANNAPAF PPCTTDIVKCAGQLVKSYYKSCCYNRHSEYSSDAEANLHFGDVLGCLCAARESLDGVDASALPSNRDREALARLRNGIMR ASERCVAEQVAEPDLIEPAPGAGWDALSVEEVAPTAATAPSLYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48168; Mature: 48168
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSMVYESKTYRVYSRVVDEIKNGKLTHRAVSVYLSWLLEKSISKLQEVVETSEEEPHP CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LLQTALDNLEKAYNDLCLAREGTADDIKQVLVDENYSYIDNLQIALLCLSKCRHGLMPMQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC GEAGEHAAAISAASTNIASALCILQDNAHPVEKNTDDTRARLCGYLDSLVDLVESLPEDA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC FLCVTQGVGEYDFAVNSTAKASLLLSLEELRAIASTIDHMADDLSRECIQKSFAAVLAPV EEHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVMISILSQAPDIRAQTALHCLLANRLIENSEKAIEGYTQDQHTSDKEMNAEDVISSATL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH CTAGSALRLLASCANNAPAFPPCTTDIVKCAGQLVKSYYKSCCYNRHSEYSSDAEANLHF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH GDVLGCLCAARESLDGVDASALPSNRDREALARLRNGIMRASERCVAEQVAEPDLIEPAP HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GAGWDALSVEEVAPTAATAPSLYI CCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MHSSMVYESKTYRVYSRVVDEIKNGKLTHRAVSVYLSWLLEKSISKLQEVVETSEEEPHP CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH LLQTALDNLEKAYNDLCLAREGTADDIKQVLVDENYSYIDNLQIALLCLSKCRHGLMPMQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC GEAGEHAAAISAASTNIASALCILQDNAHPVEKNTDDTRARLCGYLDSLVDLVESLPEDA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC FLCVTQGVGEYDFAVNSTAKASLLLSLEELRAIASTIDHMADDLSRECIQKSFAAVLAPV EEHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVMISILSQAPDIRAQTALHCLLANRLIENSEKAIEGYTQDQHTSDKEMNAEDVISSATL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHH CTAGSALRLLASCANNAPAFPPCTTDIVKCAGQLVKSYYKSCCYNRHSEYSSDAEANLHF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH GDVLGCLCAARESLDGVDASALPSNRDREALARLRNGIMRASERCVAEQVAEPDLIEPAP HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GAGWDALSVEEVAPTAATAPSLYI CCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA