Definition Anaplasma phagocytophilum HZ, complete genome.
Accession NC_007797
Length 1,471,282

Click here to switch to the map view.

The map label for this gene is 88607000

Identifier: 88607000

GI number: 88607000

Start: 893091

End: 894434

Strand: Direct

Name: 88607000

Synonym: APH_0843

Alternate gene names: NA

Gene position: 893091-894434 (Clockwise)

Preceding gene: 88607491

Following gene: 88607401

Centisome position: 60.7

GC content: 39.43

Gene sequence:

>1344_bases
ATGGGTTGGTGGCTGCCAGCAGGTAGATTTTATGAGGCTGTCAGTAACGGCATACGGCGGGGAAAGATATCACAGAAGGG
TGTTGCTATGAAGGTATGTTATGCGTTAGAGAAGTCAATTAGTAAGCTCCCTGAAGTTCTGTGGAACGATGGTGTGAAAT
TAGCGGAGGAAGCTTCCGGTAAAAACTCTGTTTATATAGAGCGCGCTCGTCATGCTGCGCAGCTTATGTCCGTTGTGTAT
GATAAACTAACTGCAGCATGTCAGGCACCTGATGATTTAGGAAAAATTCTTATTGAAGATGCTAAACAGCACGTTACGCT
ATTACTAGCGGCATTGAATGAGATTGTAATGTTACGAGAAAGGCCGTTTCCTGAAAACATGCGCATGGGAATTGATTGTT
TCAAAGCATGTTCTGCTTCTTCCTATCTTGCTGCTGCTATAGGTTTTATTCAGAATCATGAATGTTACACTGTAGGATCT
GGGAAAATTGATAGGAAGGGTATTTTTGAGGCACGTACCCGATTATGTCTTAAGTTAGACGCTCTTTTGGATTCTTGGAT
TGCGCTTCCTGAAAAGGCATTTTCGCACCTTATAGAAGATAAAGAGGGGTTTCTCGGAATACGCATTACGAAGTCTTATG
TAGTTAGCAGTCTGGAAGAGCTCCGTGTCTTTGCTCACATGTTAGGGCCAGAAATCATCTGGCCCGATAGGTGTATGCTT
TTAAACTCTTTTAGTACCCTGTTTATGCCGATACAGAAGTTGGAAATAAAGATAAACGAAACAAATCCTTGTGGTATATT
GAATAAAATCATAAATCAAGCGACAAAAGATATAGAAAAAGACTTTAAAGACTATTATGAGAATGAAAGACATAGAGACA
CTGATATTAGCGACAAGGAGTTTTTTACTTGCCATCTTTTAAGAACTATAGCAGCGGGGCATGCACTTACATTAAGGTGC
TTAGATTGTGAACCTGCCTCTCCTTGCGTGGATGATATTAGCTTATACGTTATAGTGCTAAAAGACTTGCTCTTTAGATA
TGTTGGGAGTTTGGAAGAAGAGCGAATAGAAGATGTAGCTTATTCTGGATCTTTTCTTAACTTAGTACGGATTGCGCGCG
ATTCTCTTTGCAGAATACAAACTGACACTTTACCAAATCAAATAAATGATGTGGTTGTGTTTAATAACATGAAAAAAACA
ATAGAAAAGTTAGAGGAGAGGTGCATCAACACACGTAAAGGAAGACGCGAAGTAAAAGAACCTGAGGGAATAATTGACGA
AATATTAGCGTTATTAAGCACAGAAGTTAAAGATGTCGGAGATAAAAGTAAAGCGTCATCATAG

Upstream 100 bases:

>100_bases
TAATAATTCTTAAAAAATTAATATATTTCTTGTGCATTGTATAAAAACGTCTCTATACTGCCTACAGGTGCGTTAAGGTA
TAGTTATGCCCAAGATGTAT

Downstream 100 bases:

>100_bases
ATAAAAAGAAAACCGTCGACAGATTTATTTTGCAGTAGTGAATCATTTTCTGAATTATATGTAAGTAAGGTATTAGAAAT
GCTGTAATTATTTAATGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MGWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASGKNSVYIERARHAAQLMSVVY
DKLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRERPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGS
GKIDRKGIFEARTRLCLKLDALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCML
LNSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKEFFTCHLLRTIAAGHALTLRC
LDCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVAYSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKT
IEKLEERCINTRKGRREVKEPEGIIDEILALLSTEVKDVGDKSKASS

Sequences:

>Translated_447_residues
MGWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASGKNSVYIERARHAAQLMSVVY
DKLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRERPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGS
GKIDRKGIFEARTRLCLKLDALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCML
LNSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKEFFTCHLLRTIAAGHALTLRC
LDCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVAYSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKT
IEKLEERCINTRKGRREVKEPEGIIDEILALLSTEVKDVGDKSKASS
>Mature_446_residues
GWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASGKNSVYIERARHAAQLMSVVYD
KLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRERPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGSG
KIDRKGIFEARTRLCLKLDALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCMLL
NSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKEFFTCHLLRTIAAGHALTLRCL
DCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVAYSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKTI
EKLEERCINTRKGRREVKEPEGIIDEILALLSTEVKDVGDKSKASS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50524; Mature: 50393

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASG
CCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
KNSVYIERARHAAQLMSVVYDKLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGSGKIDRKGIFEARTRLCLKLD
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
ALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCML
HHHHHHHHCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LNSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKE
HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
FFTCHLLRTIAAGHALTLRCLDCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVA
HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKTIEKLEERCINTRKGRREVKE
HCCHHHHHHHHHHHHHHHEECCCCCCHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
PEGIIDEILALLSTEVKDVGDKSKASS
CCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASG
CCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
KNSVYIERARHAAQLMSVVYDKLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGSGKIDRKGIFEARTRLCLKLD
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
ALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCML
HHHHHHHHCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LNSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKE
HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
FFTCHLLRTIAAGHALTLRCLDCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVA
HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKTIEKLEERCINTRKGRREVKE
HCCHHHHHHHHHHHHHHHEECCCCCCHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
PEGIIDEILALLSTEVKDVGDKSKASS
CCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA