| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607000
Identifier: 88607000
GI number: 88607000
Start: 893091
End: 894434
Strand: Direct
Name: 88607000
Synonym: APH_0843
Alternate gene names: NA
Gene position: 893091-894434 (Clockwise)
Preceding gene: 88607491
Following gene: 88607401
Centisome position: 60.7
GC content: 39.43
Gene sequence:
>1344_bases ATGGGTTGGTGGCTGCCAGCAGGTAGATTTTATGAGGCTGTCAGTAACGGCATACGGCGGGGAAAGATATCACAGAAGGG TGTTGCTATGAAGGTATGTTATGCGTTAGAGAAGTCAATTAGTAAGCTCCCTGAAGTTCTGTGGAACGATGGTGTGAAAT TAGCGGAGGAAGCTTCCGGTAAAAACTCTGTTTATATAGAGCGCGCTCGTCATGCTGCGCAGCTTATGTCCGTTGTGTAT GATAAACTAACTGCAGCATGTCAGGCACCTGATGATTTAGGAAAAATTCTTATTGAAGATGCTAAACAGCACGTTACGCT ATTACTAGCGGCATTGAATGAGATTGTAATGTTACGAGAAAGGCCGTTTCCTGAAAACATGCGCATGGGAATTGATTGTT TCAAAGCATGTTCTGCTTCTTCCTATCTTGCTGCTGCTATAGGTTTTATTCAGAATCATGAATGTTACACTGTAGGATCT GGGAAAATTGATAGGAAGGGTATTTTTGAGGCACGTACCCGATTATGTCTTAAGTTAGACGCTCTTTTGGATTCTTGGAT TGCGCTTCCTGAAAAGGCATTTTCGCACCTTATAGAAGATAAAGAGGGGTTTCTCGGAATACGCATTACGAAGTCTTATG TAGTTAGCAGTCTGGAAGAGCTCCGTGTCTTTGCTCACATGTTAGGGCCAGAAATCATCTGGCCCGATAGGTGTATGCTT TTAAACTCTTTTAGTACCCTGTTTATGCCGATACAGAAGTTGGAAATAAAGATAAACGAAACAAATCCTTGTGGTATATT GAATAAAATCATAAATCAAGCGACAAAAGATATAGAAAAAGACTTTAAAGACTATTATGAGAATGAAAGACATAGAGACA CTGATATTAGCGACAAGGAGTTTTTTACTTGCCATCTTTTAAGAACTATAGCAGCGGGGCATGCACTTACATTAAGGTGC TTAGATTGTGAACCTGCCTCTCCTTGCGTGGATGATATTAGCTTATACGTTATAGTGCTAAAAGACTTGCTCTTTAGATA TGTTGGGAGTTTGGAAGAAGAGCGAATAGAAGATGTAGCTTATTCTGGATCTTTTCTTAACTTAGTACGGATTGCGCGCG ATTCTCTTTGCAGAATACAAACTGACACTTTACCAAATCAAATAAATGATGTGGTTGTGTTTAATAACATGAAAAAAACA ATAGAAAAGTTAGAGGAGAGGTGCATCAACACACGTAAAGGAAGACGCGAAGTAAAAGAACCTGAGGGAATAATTGACGA AATATTAGCGTTATTAAGCACAGAAGTTAAAGATGTCGGAGATAAAAGTAAAGCGTCATCATAG
Upstream 100 bases:
>100_bases TAATAATTCTTAAAAAATTAATATATTTCTTGTGCATTGTATAAAAACGTCTCTATACTGCCTACAGGTGCGTTAAGGTA TAGTTATGCCCAAGATGTAT
Downstream 100 bases:
>100_bases ATAAAAAGAAAACCGTCGACAGATTTATTTTGCAGTAGTGAATCATTTTCTGAATTATATGTAAGTAAGGTATTAGAAAT GCTGTAATTATTTAATGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MGWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASGKNSVYIERARHAAQLMSVVY DKLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRERPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGS GKIDRKGIFEARTRLCLKLDALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCML LNSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKEFFTCHLLRTIAAGHALTLRC LDCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVAYSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKT IEKLEERCINTRKGRREVKEPEGIIDEILALLSTEVKDVGDKSKASS
Sequences:
>Translated_447_residues MGWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASGKNSVYIERARHAAQLMSVVY DKLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRERPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGS GKIDRKGIFEARTRLCLKLDALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCML LNSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKEFFTCHLLRTIAAGHALTLRC LDCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVAYSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKT IEKLEERCINTRKGRREVKEPEGIIDEILALLSTEVKDVGDKSKASS >Mature_446_residues GWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASGKNSVYIERARHAAQLMSVVYD KLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRERPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGSG KIDRKGIFEARTRLCLKLDALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCMLL NSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKEFFTCHLLRTIAAGHALTLRCL DCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVAYSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKTI EKLEERCINTRKGRREVKEPEGIIDEILALLSTEVKDVGDKSKASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50524; Mature: 50393
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASG CCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC KNSVYIERARHAAQLMSVVYDKLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGSGKIDRKGIFEARTRLCLKLD CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH ALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCML HHHHHHHHCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LNSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKE HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FFTCHLLRTIAAGHALTLRCLDCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVA HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKTIEKLEERCINTRKGRREVKE HCCHHHHHHHHHHHHHHHEECCCCCCHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC PEGIIDEILALLSTEVKDVGDKSKASS CCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GWWLPAGRFYEAVSNGIRRGKISQKGVAMKVCYALEKSISKLPEVLWNDGVKLAEEASG CCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC KNSVYIERARHAAQLMSVVYDKLTAACQAPDDLGKILIEDAKQHVTLLLAALNEIVMLRE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPFPENMRMGIDCFKACSASSYLAAAIGFIQNHECYTVGSGKIDRKGIFEARTRLCLKLD CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH ALLDSWIALPEKAFSHLIEDKEGFLGIRITKSYVVSSLEELRVFAHMLGPEIIWPDRCML HHHHHHHHCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LNSFSTLFMPIQKLEIKINETNPCGILNKIINQATKDIEKDFKDYYENERHRDTDISDKE HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FFTCHLLRTIAAGHALTLRCLDCEPASPCVDDISLYVIVLKDLLFRYVGSLEEERIEDVA HHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YSGSFLNLVRIARDSLCRIQTDTLPNQINDVVVFNNMKKTIEKLEERCINTRKGRREVKE HCCHHHHHHHHHHHHHHHEECCCCCCHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC PEGIIDEILALLSTEVKDVGDKSKASS CCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA