Click here to switch to the map view.

The map label for this gene is 88607403

Identifier: 88607403

GI number: 88607403

Start: 28789

End: 30648

Strand: Reverse

Name: 88607403

Synonym: APH_0032

Alternate gene names: NA

Gene position: 30648-28789 (Counterclockwise)

Preceding gene: 88606808

Following gene: 88606918

Centisome position: 2.08

GC content: 41.67

Gene sequence:

>1860_bases
ATGTTTGAACACAATATTCCTGATACATACACAGGAACAACTGCAGAAGGTTCTCCTGGCTTAGCAGGCGGGGATTTTAG
CTTAAGTTCTATTGACTTTACAAGGGACTTTACAATTGAATCACATAGAGGAAGCTCAGCTGATGACCCAGGTTACATCA
GCTTTAGGGATCAAGACGGAAACGTCATGTCACGTTTTCTTGATGTGTACGTAGCTAATTTCAGCTTGCGATGCAAGCAT
TCTCCCTATAACAACGACAGAATGGAAACAGCTGCGTTCTCTCTAACTCCCGACATAATAGAGCCTTCTGCTTTATTGCA
AGAATCACATAGTACACAAAACAATGTAGAAGAGGCAGTACAAGTTACAGCTCTTGAGTGCCCTCCATGTAATCCAGTCC
CTGCCGAGGAAGTAGCTCCTCAACCGTCTTTTCTAAGCAGAATAATTCAGGCGTTCTTGTGGTTATTCACGCCTTCTTCT
ACTACCGACACTGCTGAAGACAGCAAGTGTAATAGTAGCGATACTTCAAAATGTACCTCTGCTAGCAGTGAGTCATTAGA
GCAGCAACAAGAATCAGTGGAAGTGCAACCATCTGTACTTATGTCTACTGCCCCTATAGCAACAGAGCCTCAAAATGCGG
TTGTTAACCAAGTAAACACTACTGCAGTACAAGTAGAATCATCCATTATTGTGCCAGAATCGCAACACACTGACGTTACC
GTGCTCGAAGATACTACTGAGACGATAACTGTTGATGGGGAATATGGACATTTTAGTGACATTGCTTCAGGTGAACACAA
TAACGATCTGCCTGCCATGTTGTTAGATGAAGCAGACTTCACTATGTTATTAGCGAACGAGGAGTCAAAGACCCTGGAGT
CTATGCCTTCTGATAGCCTAGAAGACAATGTTCAGGAACTAGGTACATTGCCTTTACAAGAAGGTGAAACAGTTTCTGAG
GGCAACACACGAGAGTCACTACCCACTGACGTTTCACAAGACTCAGTTGGTGTAAGTACAGATCTTGAAGCTCATTCTCA
AGAAGTTGAAACAGTTTCTGAGGTCAGCACACAAGATTCACTATCCACTAACATTTCACAAGACTCAGTTGGTGTAAGTA
CAGATCTTGAAGCTCATTCTAAAGGAGTTGAAATAGTTTCTGAGGGCGGCACACAAGATTCACTATCCGCTGATTTTCCA
ATAAACACAGTTGAAAGTGAAAGTACAGATCTTGAAGCTCATTCTCAAGAAGTTGAAACTGTTTCTGAATTCACACAAGA
TTCACTATCCACTAACATTTCACAAGACTCAGTTGGTGTAAGTACAGATCTTGAAGTTCATTCTCAAGAAGTTGAAATAG
TTTCTGAGGGCGGCACACAAGATTCACTATCCACTAACATTTCACAAGACTCAGTTGGTGTAAGTACAGATCTTGAAGCT
CATTCTCAAGAAGTTGAAACTGTTTCTGAATTCACACAAGATTCACTATCCACTAACATTTCACAAGACTCAGTTGGTGT
AAGTACAGATCTTGAAGTTCATTCTCAAGAAGTTGAAATAGTTTCTGAGGGCGGCACACAAGATTCACTATCCACTAACA
TTTCACAAGACTCAGTTGGTGTAAGTACAGATCTTGAAGCTCATTCTAAAGGAGTTGAAATAGTTTCTGAGGGCGGCACA
CAAGATTCACTATCCGCTGATTTTCCAATAAACACAGTTGAAAGTGAAAGTACAGATCTTGAAGCTCATTCCCCAGAAGG
TGAAATAGTTTCTGAGGTCAGCACACAAGATGCGCCATCCACTGGAGTAGAGATCAGATTTATGGATCGTGATTCTGATG
ATGACGTGCTCGCGTTGTGA

Upstream 100 bases:

>100_bases
GTCACGCGTGCGTTAGGTTTTACGTATACGTGTCTGGGACTTCACGAAAACTCGACGCAGGCGGATTTTGTACTATGTTT
CACTTAACAAGGTATTATAA

Downstream 100 bases:

>100_bases
AGTGATCATGGTAGGGGAAACAGTTATGGCGTAAAGACATCTTTGATGACTTGTCTTGCGTGAATAAGTAGTGCAAGTTT
TTTATGCATTGATGTGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MFEHNIPDTYTGTTAEGSPGLAGGDFSLSSIDFTRDFTIESHRGSSADDPGYISFRDQDGNVMSRFLDVYVANFSLRCKH
SPYNNDRMETAAFSLTPDIIEPSALLQESHSTQNNVEEAVQVTALECPPCNPVPAEEVAPQPSFLSRIIQAFLWLFTPSS
TTDTAEDSKCNSSDTSKCTSASSESLEQQQESVEVQPSVLMSTAPIATEPQNAVVNQVNTTAVQVESSIIVPESQHTDVT
VLEDTTETITVDGEYGHFSDIASGEHNNDLPAMLLDEADFTMLLANEESKTLESMPSDSLEDNVQELGTLPLQEGETVSE
GNTRESLPTDVSQDSVGVSTDLEAHSQEVETVSEVSTQDSLSTNISQDSVGVSTDLEAHSKGVEIVSEGGTQDSLSADFP
INTVESESTDLEAHSQEVETVSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVGVSTDLEA
HSQEVETVSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVGVSTDLEAHSKGVEIVSEGGT
QDSLSADFPINTVESESTDLEAHSPEGEIVSEVSTQDAPSTGVEIRFMDRDSDDDVLAL

Sequences:

>Translated_619_residues
MFEHNIPDTYTGTTAEGSPGLAGGDFSLSSIDFTRDFTIESHRGSSADDPGYISFRDQDGNVMSRFLDVYVANFSLRCKH
SPYNNDRMETAAFSLTPDIIEPSALLQESHSTQNNVEEAVQVTALECPPCNPVPAEEVAPQPSFLSRIIQAFLWLFTPSS
TTDTAEDSKCNSSDTSKCTSASSESLEQQQESVEVQPSVLMSTAPIATEPQNAVVNQVNTTAVQVESSIIVPESQHTDVT
VLEDTTETITVDGEYGHFSDIASGEHNNDLPAMLLDEADFTMLLANEESKTLESMPSDSLEDNVQELGTLPLQEGETVSE
GNTRESLPTDVSQDSVGVSTDLEAHSQEVETVSEVSTQDSLSTNISQDSVGVSTDLEAHSKGVEIVSEGGTQDSLSADFP
INTVESESTDLEAHSQEVETVSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVGVSTDLEA
HSQEVETVSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVGVSTDLEAHSKGVEIVSEGGT
QDSLSADFPINTVESESTDLEAHSPEGEIVSEVSTQDAPSTGVEIRFMDRDSDDDVLAL
>Mature_619_residues
MFEHNIPDTYTGTTAEGSPGLAGGDFSLSSIDFTRDFTIESHRGSSADDPGYISFRDQDGNVMSRFLDVYVANFSLRCKH
SPYNNDRMETAAFSLTPDIIEPSALLQESHSTQNNVEEAVQVTALECPPCNPVPAEEVAPQPSFLSRIIQAFLWLFTPSS
TTDTAEDSKCNSSDTSKCTSASSESLEQQQESVEVQPSVLMSTAPIATEPQNAVVNQVNTTAVQVESSIIVPESQHTDVT
VLEDTTETITVDGEYGHFSDIASGEHNNDLPAMLLDEADFTMLLANEESKTLESMPSDSLEDNVQELGTLPLQEGETVSE
GNTRESLPTDVSQDSVGVSTDLEAHSQEVETVSEVSTQDSLSTNISQDSVGVSTDLEAHSKGVEIVSEGGTQDSLSADFP
INTVESESTDLEAHSQEVETVSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVGVSTDLEA
HSQEVETVSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVGVSTDLEAHSKGVEIVSEGGT
QDSLSADFPINTVESESTDLEAHSPEGEIVSEVSTQDAPSTGVEIRFMDRDSDDDVLAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66110; Mature: 66110

Theoretical pI: Translated: 3.55; Mature: 3.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEHNIPDTYTGTTAEGSPGLAGGDFSLSSIDFTRDFTIESHRGSSADDPGYISFRDQDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEECCCCCCCCCCCEEEEECCCC
NVMSRFLDVYVANFSLRCKHSPYNNDRMETAAFSLTPDIIEPSALLQESHSTQNNVEEAV
HHHHHHHHHHHHCEEEEEECCCCCCCCHHHEEEECCCCCCCHHHHHHHHCCCHHHHHHHH
QVTALECPPCNPVPAEEVAPQPSFLSRIIQAFLWLFTPSSTTDTAEDSKCNSSDTSKCTS
EEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHC
ASSESLEQQQESVEVQPSVLMSTAPIATEPQNAVVNQVNTTAVQVESSIIVPESQHTDVT
CCHHHHHHHHHHCCCCCHHHEECCCCCCCCHHHHHHCCCCEEEEEECEEECCCCCCCCEE
VLEDTTETITVDGEYGHFSDIASGEHNNDLPAMLLDEADFTMLLANEESKTLESMPSDSL
EEECCCEEEEECCCCCCCHHHCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHCCCCHH
EDNVQELGTLPLQEGETVSEGNTRESLPTDVSQDSVGVSTDLEAHSQEVETVSEVSTQDS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSTNISQDSVGVSTDLEAHSKGVEIVSEGGTQDSLSADFPINTVESESTDLEAHSQEVET
HHCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVGVSTDLEA
HHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHCCCCCCCCCCCCCHHH
HSQEVETVSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHCCCCCCCCC
VSTDLEAHSKGVEIVSEGGTQDSLSADFPINTVESESTDLEAHSPEGEIVSEVSTQDAPS
CCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
TGVEIRFMDRDSDDDVLAL
CCCEEEEECCCCCCCEEEC
>Mature Secondary Structure
MFEHNIPDTYTGTTAEGSPGLAGGDFSLSSIDFTRDFTIESHRGSSADDPGYISFRDQDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEECCCCCCCCCCCEEEEECCCC
NVMSRFLDVYVANFSLRCKHSPYNNDRMETAAFSLTPDIIEPSALLQESHSTQNNVEEAV
HHHHHHHHHHHHCEEEEEECCCCCCCCHHHEEEECCCCCCCHHHHHHHHCCCHHHHHHHH
QVTALECPPCNPVPAEEVAPQPSFLSRIIQAFLWLFTPSSTTDTAEDSKCNSSDTSKCTS
EEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHC
ASSESLEQQQESVEVQPSVLMSTAPIATEPQNAVVNQVNTTAVQVESSIIVPESQHTDVT
CCHHHHHHHHHHCCCCCHHHEECCCCCCCCHHHHHHCCCCEEEEEECEEECCCCCCCCEE
VLEDTTETITVDGEYGHFSDIASGEHNNDLPAMLLDEADFTMLLANEESKTLESMPSDSL
EEECCCEEEEECCCCCCCHHHCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHCCCCHH
EDNVQELGTLPLQEGETVSEGNTRESLPTDVSQDSVGVSTDLEAHSQEVETVSEVSTQDS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSTNISQDSVGVSTDLEAHSKGVEIVSEGGTQDSLSADFPINTVESESTDLEAHSQEVET
HHCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVGVSTDLEA
HHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHCCCCCCCCCCCCCHHH
HSQEVETVSEFTQDSLSTNISQDSVGVSTDLEVHSQEVEIVSEGGTQDSLSTNISQDSVG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHCCCCCCCCC
VSTDLEAHSKGVEIVSEGGTQDSLSADFPINTVESESTDLEAHSPEGEIVSEVSTQDAPS
CCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
TGVEIRFMDRDSDDDVLAL
CCCEEEEECCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA