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The map label for this gene is fdxA [H]

Identifier: 88606918

GI number: 88606918

Start: 25534

End: 25914

Strand: Reverse

Name: fdxA [H]

Synonym: APH_0027

Alternate gene names: 88606918

Gene position: 25914-25534 (Counterclockwise)

Preceding gene: 88607403

Following gene: 88607364

Centisome position: 1.76

GC content: 40.94

Gene sequence:

>381_bases
ATGACACACTTTGTTACCGACCGCTGCATTCGCTGTAAGTATACTGACTGTGTAGAAGTATGCCCTGTTGACTGCTTTTA
TGAAGGAAATAACATGCTAGTTATAGATCCTGATCAGTGTATTGACTGTGGTGTATGCGTTCCTGAATGCCCAGCCGACG
CCATTGTGAGCGATGAGTTCATCGAAGACGTTCTTGCCTCTGATGATAGTGCATTAAATGATGAACAGAAGATGCTCAAA
ACTTTTTACAAGATCAACGAAGACTTTTCAAAAAAGTGGAAGAACATCACATCAGCACAGCCTCATCTTGAAGATGCCGA
TACATACAAGTCAATGGCAGGAAAGTATCAATTCTTCGACGAAAATCTTAAGGAAGAATAG

Upstream 100 bases:

>100_bases
TACGCTATTCTCCTGCTCTTTATTAATATTTAGACTATTATCTTTGCTCCCAAAGCTCGAGTTAGGTATTATTACAATTG
TATTGTTCGGCTTCTTTTGT

Downstream 100 bases:

>100_bases
ATAACCTTCCCTACCTCATAGTTATACTTAACGATTATACAACCGCAGGCTCTCTCGCAAAGGAAAAGTCCATCATTGCA
TTTACTGATCTCCTTGCCGC

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MTHFVTDRCIRCKYTDCVEVCPVDCFYEGNNMLVIDPDQCIDCGVCVPECPADAIVSDEFIEDVLASDDSALNDEQKMLK
TFYKINEDFSKKWKNITSAQPHLEDADTYKSMAGKYQFFDENLKEE

Sequences:

>Translated_126_residues
MTHFVTDRCIRCKYTDCVEVCPVDCFYEGNNMLVIDPDQCIDCGVCVPECPADAIVSDEFIEDVLASDDSALNDEQKMLK
TFYKINEDFSKKWKNITSAQPHLEDADTYKSMAGKYQFFDENLKEE
>Mature_125_residues
THFVTDRCIRCKYTDCVEVCPVDCFYEGNNMLVIDPDQCIDCGVCVPECPADAIVSDEFIEDVLASDDSALNDEQKMLKT
FYKINEDFSKKWKNITSAQPHLEDADTYKSMAGKYQFFDENLKEE

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 14477; Mature: 14346

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHFVTDRCIRCKYTDCVEVCPVDCFYEGNNMLVIDPDQCIDCGVCVPECPADAIVSDEF
CCCCCCCCHHCCCCCCHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH
IEDVLASDDSALNDEQKMLKTFYKINEDFSKKWKNITSAQPHLEDADTYKSMAGKYQFFD
HHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHH
ENLKEE
HHCCCC
>Mature Secondary Structure 
THFVTDRCIRCKYTDCVEVCPVDCFYEGNNMLVIDPDQCIDCGVCVPECPADAIVSDEF
CCCCCCCHHCCCCCCHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH
IEDVLASDDSALNDEQKMLKTFYKINEDFSKKWKNITSAQPHLEDADTYKSMAGKYQFFD
HHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHH
ENLKEE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2826477; 8244942; 6848518; 7120409; 3422475; 2926817; 9600844; 10387068; 10593945; 1855590; 2153958; 1657971; 8132582 [H]