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The map label for this gene is p44-72 [H]

Identifier: 88607252

GI number: 88607252

Start: 683389

End: 684696

Strand: Direct

Name: p44-72 [H]

Synonym: APH_0664

Alternate gene names: 88607252

Gene position: 683389-684696 (Clockwise)

Preceding gene: 88606739

Following gene: 88607668

Centisome position: 46.45

GC content: 40.37

Gene sequence:

>1308_bases
ATGAGCGCTAAAAATTATAATAACCTATTTTTAGGAAGCATAATGATGTCTCTTGCCGTGCTAATAACTTGTCAAGGAGC
TCAAGCAAGGGATGCTGCGAAAAGTACTTTTGAGGTTGAGAAACCCCAGTATTTCTATATAGGATTGGATTACAGTCCAG
CATTTAGCAACATAAGAAACTTCACTATACAGGAAAGCAACGGTGAAACTAAGGCGATATATCCGTACATTAGGGGAGAT
AAGGAGATAATACTGGATGCTAGTAGATTTGACTGGAATATGCCAAACCCGCGCATAGGCTTTAAAAACAGTACGCTTGT
AGCTGTAGGAAGTAGTATTGGTTATGCTATGGGCAGTATGAGACTTGAAATTGAAGTTTCTCATGAGCGTTTTAAGAGCC
GGGGGAGATATATTGGAAATGAAAGAGAAGAAGAATCTGATACAATATATCTCCTTGCGAAGGAGTTAGGACATAGCACA
GTCACTGAAAAAACCGAAGATCTTGTATCAGCTTTGACAAAAGTAAAAGGTGAAGATATTGTGCGCCTCGCTAATGCCTT
AGAGAAGACCCGTCCAGATATTGGTAGAAAGATCTGTAGGACTCGCAGTATTACTGGAGGTAAAAACTACGGTAAGTATA
ATAGATACACTTCGTGGCTCAAAGATACTAATAATCTCACAGCCTTATGTGGAGATATAGGAGGTAACAGCGATAAACAT
GAACATCACAACATGATTCAAAATTCTTTTAAGGACTTCGCGCGTGAAGCTCTGCTAGGTGGTAGCACAAACTGGCCAAC
AACAACTGGTGATAAGACACGGGGAAACGACAATGCAAAGGCATTAGCAAGAGACCTAATAACAGTCTTAAGCCGAGAAG
AAAAGATAGCAGTTGCGGGATTAATGGTAAATACTATTGAAGGGGGTGAAGTAGTAGACATTGGTGAAATTTCTTCTACC
TCCGTAATGGTAAATGTGTGTTACGATTTCTTGAGTAAAGAAGGATCTATAGTTCCCTATGGATGCATGGGATTAGGCAG
TAATTTTGTGGGCATTGTCAAGGGACACTTTACTCCAAAGCCAGCTTATAGATTAAAGGCTGGTGTCAGTTATAAGCTTT
TCTCTGGTGTTGATATCTTTGCGGCAGGGTTCTACCATAGGGTTTTTGGTAGCACCGAATATACAGACATTCCTGTAGAG
TACTTGATAGATGATGTGAGTCCTTACGGACGTACTAAGGAGACTGCAATGGCTGATTTCAGAATGAGTTATGCTGGGGG
TGAGTTTGGTATGAGATTTGCTTTTTAG

Upstream 100 bases:

>100_bases
TGCCGGTGGTGAGTTAGGTGTAAGGTTAGCCTTTTAATGTAATAGTAAAGGGGGATGGGTCTATTTACGTAAGGGCCCTT
CAGTTTTAGGAGTTAGGTAT

Downstream 100 bases:

>100_bases
CTGGGGTGATTGTTATAAGGAAAGTAATGGCATGGGTGGTAGCAGCGCGGGCGTTTATATTTAGCAGTGTTATGGGGGGA
GAGACTCTGCTATAAAAGAT

Product: P44-72 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSAKNYNNLFLGSIMMSLAVLITCQGAQARDAAKSTFEVEKPQYFYIGLDYSPAFSNIRNFTIQESNGETKAIYPYIRGD
KEIILDASRFDWNMPNPRIGFKNSTLVAVGSSIGYAMGSMRLEIEVSHERFKSRGRYIGNEREEESDTIYLLAKELGHST
VTEKTEDLVSALTKVKGEDIVRLANALEKTRPDIGRKICRTRSITGGKNYGKYNRYTSWLKDTNNLTALCGDIGGNSDKH
EHHNMIQNSFKDFAREALLGGSTNWPTTTGDKTRGNDNAKALARDLITVLSREEKIAVAGLMVNTIEGGEVVDIGEISST
SVMVNVCYDFLSKEGSIVPYGCMGLGSNFVGIVKGHFTPKPAYRLKAGVSYKLFSGVDIFAAGFYHRVFGSTEYTDIPVE
YLIDDVSPYGRTKETAMADFRMSYAGGEFGMRFAF

Sequences:

>Translated_435_residues
MSAKNYNNLFLGSIMMSLAVLITCQGAQARDAAKSTFEVEKPQYFYIGLDYSPAFSNIRNFTIQESNGETKAIYPYIRGD
KEIILDASRFDWNMPNPRIGFKNSTLVAVGSSIGYAMGSMRLEIEVSHERFKSRGRYIGNEREEESDTIYLLAKELGHST
VTEKTEDLVSALTKVKGEDIVRLANALEKTRPDIGRKICRTRSITGGKNYGKYNRYTSWLKDTNNLTALCGDIGGNSDKH
EHHNMIQNSFKDFAREALLGGSTNWPTTTGDKTRGNDNAKALARDLITVLSREEKIAVAGLMVNTIEGGEVVDIGEISST
SVMVNVCYDFLSKEGSIVPYGCMGLGSNFVGIVKGHFTPKPAYRLKAGVSYKLFSGVDIFAAGFYHRVFGSTEYTDIPVE
YLIDDVSPYGRTKETAMADFRMSYAGGEFGMRFAF
>Mature_434_residues
SAKNYNNLFLGSIMMSLAVLITCQGAQARDAAKSTFEVEKPQYFYIGLDYSPAFSNIRNFTIQESNGETKAIYPYIRGDK
EIILDASRFDWNMPNPRIGFKNSTLVAVGSSIGYAMGSMRLEIEVSHERFKSRGRYIGNEREEESDTIYLLAKELGHSTV
TEKTEDLVSALTKVKGEDIVRLANALEKTRPDIGRKICRTRSITGGKNYGKYNRYTSWLKDTNNLTALCGDIGGNSDKHE
HHNMIQNSFKDFAREALLGGSTNWPTTTGDKTRGNDNAKALARDLITVLSREEKIAVAGLMVNTIEGGEVVDIGEISSTS
VMVNVCYDFLSKEGSIVPYGCMGLGSNFVGIVKGHFTPKPAYRLKAGVSYKLFSGVDIFAAGFYHRVFGSTEYTDIPVEY
LIDDVSPYGRTKETAMADFRMSYAGGEFGMRFAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 48224; Mature: 48093

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKNYNNLFLGSIMMSLAVLITCQGAQARDAAKSTFEVEKPQYFYIGLDYSPAFSNIRN
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCEECCCCEEEEEEECCCHHHHHHCC
FTIQESNGETKAIYPYIRGDKEIILDASRFDWNMPNPRIGFKNSTLVAVGSSIGYAMGSM
EEEECCCCCEEEEEEEEECCCEEEEECHHCCCCCCCCCCCCCCCEEEEECCHHHHHHCCE
RLEIEVSHERFKSRGRYIGNEREEESDTIYLLAKELGHSTVTEKTEDLVSALTKVKGEDI
EEEEEECHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCHHH
VRLANALEKTRPDIGRKICRTRSITGGKNYGKYNRYTSWLKDTNNLTALCGDIGGNSDKH
HHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCH
EHHNMIQNSFKDFAREALLGGSTNWPTTTGDKTRGNDNAKALARDLITVLSREEKIAVAG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
LMVNTIEGGEVVDIGEISSTSVMVNVCYDFLSKEGSIVPYGCMGLGSNFVGIVKGHFTPK
EEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEECCCCCC
PAYRLKAGVSYKLFSGVDIFAAGFYHRVFGSTEYTDIPVEYLIDDVSPYGRTKETAMADF
CCHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHH
RMSYAGGEFGMRFAF
HHHHCCCCCCEEECC
>Mature Secondary Structure 
SAKNYNNLFLGSIMMSLAVLITCQGAQARDAAKSTFEVEKPQYFYIGLDYSPAFSNIRN
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCEECCCCEEEEEEECCCHHHHHHCC
FTIQESNGETKAIYPYIRGDKEIILDASRFDWNMPNPRIGFKNSTLVAVGSSIGYAMGSM
EEEECCCCCEEEEEEEEECCCEEEEECHHCCCCCCCCCCCCCCCEEEEECCHHHHHHCCE
RLEIEVSHERFKSRGRYIGNEREEESDTIYLLAKELGHSTVTEKTEDLVSALTKVKGEDI
EEEEEECHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCHHH
VRLANALEKTRPDIGRKICRTRSITGGKNYGKYNRYTSWLKDTNNLTALCGDIGGNSDKH
HHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCH
EHHNMIQNSFKDFAREALLGGSTNWPTTTGDKTRGNDNAKALARDLITVLSREEKIAVAG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
LMVNTIEGGEVVDIGEISSTSVMVNVCYDFLSKEGSIVPYGCMGLGSNFVGIVKGHFTPK
EEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEECCCCCC
PAYRLKAGVSYKLFSGVDIFAAGFYHRVFGSTEYTDIPVEYLIDDVSPYGRTKETAMADF
CCHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHH
RMSYAGGEFGMRFAF
HHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]