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The map label for this gene is p44-71 [H]

Identifier: 88606739

GI number: 88606739

Start: 682036

End: 683325

Strand: Direct

Name: p44-71 [H]

Synonym: APH_0663

Alternate gene names: 88606739

Gene position: 682036-683325 (Clockwise)

Preceding gene: 88607440

Following gene: 88607252

Centisome position: 46.36

GC content: 38.99

Gene sequence:

>1290_bases
ATGAGAGTTAGAAGTTATAGTAATCTGTTTTTAGCAGGAGTAATGGCATCCATAGTAGGAGTTACTGTTAGCAATGCCGC
GAAAGCAGATCAAGATTATGGAGCTTCTTTAGATGCTAGGAGGTCTAGTCATTTTTACATAGGGTTAGATTATAGTCCGG
CATTTAGTAAGATAAGAGATTTTAAGATAATAGAAAGTAGTGGTGAAACTGCGGCGGTATATCCGTATTTTGATGATGGG
AGGAGCCATGCAATAGAATACAATAAATTTGATTGGAATACTCCAAATCCTCGTATAGGCTTTAAGGACAATACACTTTT
AGCTATAGGTAGCAGTATAGGTTATGCTTTTTCTAGAGCTAGAGTTGAAGTTGAAGTTGGCTACGAGTCCTTTAAGATAA
AGGATCGGGGTAAGGGTGGAAAAAAAGAGAAGGATGGAAGTGCGGTATATTTGCTCGCAAAGGAGCTTGCATATAGTGTA
GCATCTAATCAACAGGATAAGCTTGCTGTAGCATTATCTAAGGTTAAAGGGAAAGATATTGTTAATTTTGCAAAAGCCCT
AGAAAGTACTAGCCCCACTATTGGGGAAAAGGTTTGTCGAACGCGCAGTGGAAGTGGTGAGAAAAATTATGCTAGGTATG
TAGAAAAAACCTCGAGGTCCAGTAATGATACTTCACTATGTGGAGATATTGGTGGAACCAGTGCTCATAATAGTCCAAGG
GTGAATGTCTTTAAGGATTTTGCGGCTAAAACGCTAGGAGATGGTAGTAGGAACTGGCCAACATCTAGTGGGACTAAGAG
TATGGAAAACGATAATGCGAACGCTGTAGCTGCAGATTTAGTTAAAAATCTCAATATGGAGGAGAAAGCCATAGTAGCTG
GATTATTTTCAAGGACTATTGAAGGGGGTGAGGCCGCAAAGATTAGTGCTATTTCTACTACTTCTGTTATGCTGAATGTT
TGTTATGATTTTTATGGAAAAGAGTCAAGTATTGCTCCTTACGCATGTGCAGGAATAGGTAGTAATTTCGTTGGTATAGT
AGATAGCCATATCGTTCCTAAACTTGCTTATAAATTAAAAGCTGGTATAGGCTGTCAGATTTCTCCTGAAATTTCAATTT
TTGCAGGTGGGTTTTATCATCGTATTTTAGGTAATGGGAGATATGCGGATCTTCCTGTAAAGCGCTTATTTTACGATGAA
AGTCCAAAGGGGCGCACAAAAAATACCGCAGTTGCTAATTTCAGCATGAGTTATGCCGGTGGTGAGTTAGGTGTAAGGTT
AGCCTTTTAA

Upstream 100 bases:

>100_bases
GTTATGTAGGTGGTGAATTTGGCATAAGGTTTGCTTTTTAGGGTGATTGGTGGATCTGGGGGGAGGTAGAGCCTCTGCCC
TAGTTTTAGGAGTAAAGTAC

Downstream 100 bases:

>100_bases
TGTAATAGTAAAGGGGGATGGGTCTATTTACGTAAGGGCCCTTCAGTTTTAGGAGTTAGGTATATGAGCGCTAAAAATTA
TAATAACCTATTTTTAGGAA

Product: P44-71 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRVRSYSNLFLAGVMASIVGVTVSNAAKADQDYGASLDARRSSHFYIGLDYSPAFSKIRDFKIIESSGETAAVYPYFDDG
RSHAIEYNKFDWNTPNPRIGFKDNTLLAIGSSIGYAFSRARVEVEVGYESFKIKDRGKGGKKEKDGSAVYLLAKELAYSV
ASNQQDKLAVALSKVKGKDIVNFAKALESTSPTIGEKVCRTRSGSGEKNYARYVEKTSRSSNDTSLCGDIGGTSAHNSPR
VNVFKDFAAKTLGDGSRNWPTSSGTKSMENDNANAVAADLVKNLNMEEKAIVAGLFSRTIEGGEAAKISAISTTSVMLNV
CYDFYGKESSIAPYACAGIGSNFVGIVDSHIVPKLAYKLKAGIGCQISPEISIFAGGFYHRILGNGRYADLPVKRLFYDE
SPKGRTKNTAVANFSMSYAGGELGVRLAF

Sequences:

>Translated_429_residues
MRVRSYSNLFLAGVMASIVGVTVSNAAKADQDYGASLDARRSSHFYIGLDYSPAFSKIRDFKIIESSGETAAVYPYFDDG
RSHAIEYNKFDWNTPNPRIGFKDNTLLAIGSSIGYAFSRARVEVEVGYESFKIKDRGKGGKKEKDGSAVYLLAKELAYSV
ASNQQDKLAVALSKVKGKDIVNFAKALESTSPTIGEKVCRTRSGSGEKNYARYVEKTSRSSNDTSLCGDIGGTSAHNSPR
VNVFKDFAAKTLGDGSRNWPTSSGTKSMENDNANAVAADLVKNLNMEEKAIVAGLFSRTIEGGEAAKISAISTTSVMLNV
CYDFYGKESSIAPYACAGIGSNFVGIVDSHIVPKLAYKLKAGIGCQISPEISIFAGGFYHRILGNGRYADLPVKRLFYDE
SPKGRTKNTAVANFSMSYAGGELGVRLAF
>Mature_429_residues
MRVRSYSNLFLAGVMASIVGVTVSNAAKADQDYGASLDARRSSHFYIGLDYSPAFSKIRDFKIIESSGETAAVYPYFDDG
RSHAIEYNKFDWNTPNPRIGFKDNTLLAIGSSIGYAFSRARVEVEVGYESFKIKDRGKGGKKEKDGSAVYLLAKELAYSV
ASNQQDKLAVALSKVKGKDIVNFAKALESTSPTIGEKVCRTRSGSGEKNYARYVEKTSRSSNDTSLCGDIGGTSAHNSPR
VNVFKDFAAKTLGDGSRNWPTSSGTKSMENDNANAVAADLVKNLNMEEKAIVAGLFSRTIEGGEAAKISAISTTSVMLNV
CYDFYGKESSIAPYACAGIGSNFVGIVDSHIVPKLAYKLKAGIGCQISPEISIFAGGFYHRILGNGRYADLPVKRLFYDE
SPKGRTKNTAVANFSMSYAGGELGVRLAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 46243; Mature: 46243

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVRSYSNLFLAGVMASIVGVTVSNAAKADQDYGASLDARRSSHFYIGLDYSPAFSKIRD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHC
FKIIESSGETAAVYPYFDDGRSHAIEYNKFDWNTPNPRIGFKDNTLLAIGSSIGYAFSRA
EEEEECCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHEE
RVEVEVGYESFKIKDRGKGGKKEKDGSAVYLLAKELAYSVASNQQDKLAVALSKVKGKDI
EEEEEECCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCHHH
VNFAKALESTSPTIGEKVCRTRSGSGEKNYARYVEKTSRSSNDTSLCGDIGGTSAHNSPR
HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCC
VNVFKDFAAKTLGDGSRNWPTSSGTKSMENDNANAVAADLVKNLNMEEKAIVAGLFSRTI
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHC
EGGEAAKISAISTTSVMLNVCYDFYGKESSIAPYACAGIGSNFVGIVDSHIVPKLAYKLK
CCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
AGIGCQISPEISIFAGGFYHRILGNGRYADLPVKRLFYDESPKGRTKNTAVANFSMSYAG
CCCCCEECCCEEEEECCHHHHHHCCCCCCCCCHHHHEECCCCCCCCCCCEEEEEEEEECC
GELGVRLAF
CCCEEEEEC
>Mature Secondary Structure
MRVRSYSNLFLAGVMASIVGVTVSNAAKADQDYGASLDARRSSHFYIGLDYSPAFSKIRD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHC
FKIIESSGETAAVYPYFDDGRSHAIEYNKFDWNTPNPRIGFKDNTLLAIGSSIGYAFSRA
EEEEECCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHEE
RVEVEVGYESFKIKDRGKGGKKEKDGSAVYLLAKELAYSVASNQQDKLAVALSKVKGKDI
EEEEEECCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCHHH
VNFAKALESTSPTIGEKVCRTRSGSGEKNYARYVEKTSRSSNDTSLCGDIGGTSAHNSPR
HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCC
VNVFKDFAAKTLGDGSRNWPTSSGTKSMENDNANAVAADLVKNLNMEEKAIVAGLFSRTI
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHC
EGGEAAKISAISTTSVMLNVCYDFYGKESSIAPYACAGIGSNFVGIVDSHIVPKLAYKLK
CCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
AGIGCQISPEISIFAGGFYHRILGNGRYADLPVKRLFYDESPKGRTKNTAVANFSMSYAG
CCCCCEECCCEEEEECCHHHHHHCCCCCCCCCHHHHEECCCCCCCCCCCEEEEEEEEECC
GELGVRLAF
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]