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The map label for this gene is 88606714

Identifier: 88606714

GI number: 88606714

Start: 1161269

End: 1161907

Strand: Reverse

Name: 88606714

Synonym: APH_1100

Alternate gene names: NA

Gene position: 1161907-1161269 (Counterclockwise)

Preceding gene: 88607429

Following gene: 88607685

Centisome position: 78.97

GC content: 41.47

Gene sequence:

>639_bases
ATGGAAGAACACGGTGGTTGCAGTAGTATAGTTGCCAGCAGAATCAGATCTCAGATGGATAAAATCGGCGTAAACGCTCG
CGAGCTGGCTGAGAAAGCTTCTGTTGGGAAGTCATTCGTCTATGATATTCTGAGTGGTAAGTCTAGCAATCCCACGTCAA
AGAAACTTATGGCCATTGCTGAGGTATTGCAGGTTCCTTTAGCATATTTAGTGGGCAGTGATGATGGGCTTTGTGAGGTT
GCTTCTGGGGGTATTAGTCCTATATCTTACTTAGAAGATGAGGGTGTAGATGGCAGCATAAAATATGAAAAATTTTATGT
GCCTGCAAATACGAAATTACCGTTTCACACAGAACATTTACGCTTCTATGATGTTAAGGGAGATAGTATGTCTCCGACCC
TGTTTGGGCAGGATATTGTGTTAGTAGATATATCAGATAAAGTTGCACATCCTGCTGGGGTGTTTGCAATTAAGGATTCA
ATTGGCATATTGATTCGTAGATTGGAGTATATTAGGGACAGTAGCAAAATAGTGTTGCATGTAGTTTGCGACAATAAGAA
GTACTCATCGTATGAGTGTGCAGTTGAAGATATTGAGATTTTGGGACGTGTTATATGGTATGCAAGGGCGCTACGGTAG

Upstream 100 bases:

>100_bases
TGCGCGATCATAATGTTGACAAGCTACTAGGACATTAATGCTTGAGTTTATGTATTGAAAATTGTACAAGCTGTACTGAT
ATTAACTGTAAGGCGAATTT

Downstream 100 bases:

>100_bases
GGGGTTTTTTGTAGTTATAATATTATTAAGAATGTATTAACGCCTGTGCAAGGTGTTCTGTTACCCCTGTGTGGTCGGTT
GGCTGAGTTAGTTGTTATGC

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator; Prophage

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MEEHGGCSSIVASRIRSQMDKIGVNARELAEKASVGKSFVYDILSGKSSNPTSKKLMAIAEVLQVPLAYLVGSDDGLCEV
ASGGISPISYLEDEGVDGSIKYEKFYVPANTKLPFHTEHLRFYDVKGDSMSPTLFGQDIVLVDISDKVAHPAGVFAIKDS
IGILIRRLEYIRDSSKIVLHVVCDNKKYSSYECAVEDIEILGRVIWYARALR

Sequences:

>Translated_212_residues
MEEHGGCSSIVASRIRSQMDKIGVNARELAEKASVGKSFVYDILSGKSSNPTSKKLMAIAEVLQVPLAYLVGSDDGLCEV
ASGGISPISYLEDEGVDGSIKYEKFYVPANTKLPFHTEHLRFYDVKGDSMSPTLFGQDIVLVDISDKVAHPAGVFAIKDS
IGILIRRLEYIRDSSKIVLHVVCDNKKYSSYECAVEDIEILGRVIWYARALR
>Mature_212_residues
MEEHGGCSSIVASRIRSQMDKIGVNARELAEKASVGKSFVYDILSGKSSNPTSKKLMAIAEVLQVPLAYLVGSDDGLCEV
ASGGISPISYLEDEGVDGSIKYEKFYVPANTKLPFHTEHLRFYDVKGDSMSPTLFGQDIVLVDISDKVAHPAGVFAIKDS
IGILIRRLEYIRDSSKIVLHVVCDNKKYSSYECAVEDIEILGRVIWYARALR

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23324; Mature: 23324

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEHGGCSSIVASRIRSQMDKIGVNARELAEKASVGKSFVYDILSGKSSNPTSKKLMAIA
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHH
EVLQVPLAYLVGSDDGLCEVASGGISPISYLEDEGVDGSIKYEKFYVPANTKLPFHTEHL
HHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCEECCE
RFYDVKGDSMSPTLFGQDIVLVDISDKVAHPAGVFAIKDSIGILIRRLEYIRDSSKIVLH
EEEEECCCCCCCEEECCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEE
VVCDNKKYSSYECAVEDIEILGRVIWYARALR
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEEHGGCSSIVASRIRSQMDKIGVNARELAEKASVGKSFVYDILSGKSSNPTSKKLMAIA
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHH
EVLQVPLAYLVGSDDGLCEVASGGISPISYLEDEGVDGSIKYEKFYVPANTKLPFHTEHL
HHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCEECCE
RFYDVKGDSMSPTLFGQDIVLVDISDKVAHPAGVFAIKDSIGILIRRLEYIRDSSKIVLH
EEEEECCCCCCCEEECCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEE
VVCDNKKYSSYECAVEDIEILGRVIWYARALR
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA