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The map label for this gene is 88195872

Identifier: 88195872

GI number: 88195872

Start: 2057082

End: 2057549

Strand: Reverse

Name: 88195872

Synonym: SAOUHSC_02197

Alternate gene names: NA

Gene position: 2057549-2057082 (Counterclockwise)

Preceding gene: 88195873

Following gene: 88195871

Centisome position: 72.93

GC content: 33.33

Gene sequence:

>468_bases
ATGGCGGGTAGACCTAAGAAGCTTTTGTCAAATTCGAACAAGAATTATACAAAAGAAGAAATTATTGAAAAAGAGCGTCA
AGAAGCTCAATTAAATAAATTTTCTAAAATCGATACTGAACCACCGCACTTTTTAGATGAAATAGCGAAACAAGAATACT
TAAGAATATTACCGCACATGCAAGAATTGCCAATTTCCAACTTAGATAAAGCACAATTAGCACAATATTGTAGTTTTTAT
AGTGACTTTGTTAAAGCAAGTTTGATTTTAGAGCGCGAAGACTTGATTTTAGAAGACGACAAAGGAAATCAAAAGGTTAA
TCCGGCGTTCAACATAAAGGAAAAAGCGGGTATTCGATTGCAACAAACAGCTAATACTTTAGGATTAACTATTGATAGCC
GATTGCGTATTATGGTTCCTGATGAAAAAGAAGATGATGATCCATATATGGAATTTGTGAGTGATTAG

Upstream 100 bases:

>100_bases
GATGAAACGGGCGTCAATGAAAGGTTCTGGAGAACGGAGCAGAGTTTTCTTCTCAAAAAATTCCCTTTATTTAAGTTTTT
TTAGTAGGAGGTGCTAATTT

Downstream 100 bases:

>100_bases
TAATGACTGATTATGTTACTAAATACGCAAAAAAGGTAGTTTCAGGAGAAATTTTGGCAAGTTTGAAGAATATTCAAGTA
TGTAAACGTCACCTATCTTT

Product: phage terminase small subunit

Products: NA

Alternate protein names: Phage-Related Terminase-Small Subunit; Phage-Related Terminase Small Subunit; Phage Terminase-Small Subunit

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MAGRPKKLLSNSNKNYTKEEIIEKERQEAQLNKFSKIDTEPPHFLDEIAKQEYLRILPHMQELPISNLDKAQLAQYCSFY
SDFVKASLILEREDLILEDDKGNQKVNPAFNIKEKAGIRLQQTANTLGLTIDSRLRIMVPDEKEDDDPYMEFVSD

Sequences:

>Translated_155_residues
MAGRPKKLLSNSNKNYTKEEIIEKERQEAQLNKFSKIDTEPPHFLDEIAKQEYLRILPHMQELPISNLDKAQLAQYCSFY
SDFVKASLILEREDLILEDDKGNQKVNPAFNIKEKAGIRLQQTANTLGLTIDSRLRIMVPDEKEDDDPYMEFVSD
>Mature_154_residues
AGRPKKLLSNSNKNYTKEEIIEKERQEAQLNKFSKIDTEPPHFLDEIAKQEYLRILPHMQELPISNLDKAQLAQYCSFYS
DFVKASLILEREDLILEDDKGNQKVNPAFNIKEKAGIRLQQTANTLGLTIDSRLRIMVPDEKEDDDPYMEFVSD

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17990; Mature: 17858

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRPKKLLSNSNKNYTKEEIIEKERQEAQLNKFSKIDTEPPHFLDEIAKQEYLRILPHM
CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCH
QELPISNLDKAQLAQYCSFYSDFVKASLILEREDLILEDDKGNQKVNPAFNIKEKAGIRL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHCCCCH
QQTANTLGLTIDSRLRIMVPDEKEDDDPYMEFVSD
HHCCCHHCEEECCCEEEEECCCCCCCCHHHHHHCC
>Mature Secondary Structure 
AGRPKKLLSNSNKNYTKEEIIEKERQEAQLNKFSKIDTEPPHFLDEIAKQEYLRILPHM
CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCH
QELPISNLDKAQLAQYCSFYSDFVKASLILEREDLILEDDKGNQKVNPAFNIKEKAGIRL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHCCCCH
QQTANTLGLTIDSRLRIMVPDEKEDDDPYMEFVSD
HHCCCHHCEEECCCEEEEECCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA