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The map label for this gene is ompA [C]

Identifier: 87201146

GI number: 87201146

Start: 3344891

End: 3345964

Strand: Direct

Name: ompA [C]

Synonym: Saro_3134

Alternate gene names: 87201146

Gene position: 3344891-3345964 (Clockwise)

Preceding gene: 87201145

Following gene: 87201147

Centisome position: 93.92

GC content: 64.43

Gene sequence:

>1074_bases
ATGCGGAAACTGGTCCTGGGCGTTGCCTTGGCATCGAGTGCCTTGGCCTCGCCGGCACTTGCGCGGAATGATTCCTGGTA
CGTCGAAGCCGATGCCGGCGCGATGATCCTTGAAGATTCGGAGTTCAAAGTCGACGGTGTCGACGCTGCTGCCATCCTCG
ACAGCCACACCGGCTACGATTTCGGTGGTATTGTCGGTTACGACTTCGGCGGCTTCCGCCTGGAAACGGAAGTCGGCTAT
CGCCGCGCCTACAACCAGGAAGTCGACATTGCCGGCACCGTCTATACCAAGCCGCAAGGTCATGCTGACGCCCTCAGCTT
CATGGTCAACGGCATGCTGGACTTCGGTCCGGACGATGGCATGCAGGGCTTCGTCGGTGGCGGCGTTGGCGTCGCTCGCG
CGAAGTACTGGATCAACACGCCCGGCGGCGAGTTGAACGATTCCGACACCGGCTTCGCCTGGCAGGCCATTGCCGGTATC
CGCGTCCCCGTTTCGGACAGCGTGGACGTCGGCCTGAAGTACCGCTTCTTCAACGCCGACAAGGTGGATCTGGTCACGGA
TGGCGGCGATTCGGCCCGCACCCGTTTCCGTTCGCACTCGCTGCTCGGCACGCTGACCTTCAACTTCGGTGGCGCTGCCC
CGGTCGAGGAAACTCCTCCGCCGCCCCCGCCGCCCCCGCCGCCCCCGCCGCCTCCGCCCCCGCCCCCGCCGCCGGCTCCG
GTCTGCAACAAGGGTCCGTACATCGTGTTCTTCGACTGGGATAAGTCGGACATCACGCCGGAAGCAGCGACCATTCTCGA
CAACGCCATCACGGCATACGGCAACTGCGCCAGCGTTCCGATCATGCTTGCCGGCTATGCCGACCGTTCGGGCACCGTGA
AGTACAACCAGGGCCTGTCGGAGCGCCGCAACGCTTCGGTTCGCTCGTACCTCACCACGCACGGCGTGCCGGACGGCTCG
ATCACGAGCCAGGCATTCGGCGAAAGCAACCCGCGCGTTCCGACCGCCGATGGCGTTCGCGAACTTCAGAACCGTCGCGT
GGAAATCACGTACGGTCCGGGTTCGGGCATGTAA

Upstream 100 bases:

>100_bases
TTATGCAACACTCAGGGGGTTTGTCCGCTTGCATGACCACTTTGGAACCGGTAGACAACCTGCACGACGTGGCATGATGT
CGCTAAAAGGGGAAACGATA

Downstream 100 bases:

>100_bases
TCTCGATTACTGCCGAAAACGATCGAGGGGCTGGAGCAATCCAGCCCCTTTTTCGTTATGGTTCCGGATCGACACGGCTC
CGGAGACCAAAGCATGACAA

Product: OmpA/MotB

Products: NA

Alternate protein names: OMPC [H]

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRKLVLGVALASSALASPALARNDSWYVEADAGAMILEDSEFKVDGVDAAAILDSHTGYDFGGIVGYDFGGFRLETEVGY
RRAYNQEVDIAGTVYTKPQGHADALSFMVNGMLDFGPDDGMQGFVGGGVGVARAKYWINTPGGELNDSDTGFAWQAIAGI
RVPVSDSVDVGLKYRFFNADKVDLVTDGGDSARTRFRSHSLLGTLTFNFGGAAPVEETPPPPPPPPPPPPPPPPPPPPAP
VCNKGPYIVFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADRSGTVKYNQGLSERRNASVRSYLTTHGVPDGS
ITSQAFGESNPRVPTADGVRELQNRRVEITYGPGSGM

Sequences:

>Translated_357_residues
MRKLVLGVALASSALASPALARNDSWYVEADAGAMILEDSEFKVDGVDAAAILDSHTGYDFGGIVGYDFGGFRLETEVGY
RRAYNQEVDIAGTVYTKPQGHADALSFMVNGMLDFGPDDGMQGFVGGGVGVARAKYWINTPGGELNDSDTGFAWQAIAGI
RVPVSDSVDVGLKYRFFNADKVDLVTDGGDSARTRFRSHSLLGTLTFNFGGAAPVEETPPPPPPPPPPPPPPPPPPPPAP
VCNKGPYIVFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADRSGTVKYNQGLSERRNASVRSYLTTHGVPDGS
ITSQAFGESNPRVPTADGVRELQNRRVEITYGPGSGM
>Mature_357_residues
MRKLVLGVALASSALASPALARNDSWYVEADAGAMILEDSEFKVDGVDAAAILDSHTGYDFGGIVGYDFGGFRLETEVGY
RRAYNQEVDIAGTVYTKPQGHADALSFMVNGMLDFGPDDGMQGFVGGGVGVARAKYWINTPGGELNDSDTGFAWQAIAGI
RVPVSDSVDVGLKYRFFNADKVDLVTDGGDSARTRFRSHSLLGTLTFNFGGAAPVEETPPPPPPPPPPPPPPPPPPPPAP
VCNKGPYIVFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADRSGTVKYNQGLSERRNASVRSYLTTHGVPDGS
ITSQAFGESNPRVPTADGVRELQNRRVEITYGPGSGM

Specific function: Growth enhancer [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=112, Percent_Identity=37.5, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786962, Length=104, Percent_Identity=35.5769230769231, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 37838; Mature: 37838

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLVLGVALASSALASPALARNDSWYVEADAGAMILEDSEFKVDGVDAAAILDSHTGYD
CCCEEEEHHHHHHHHCCCHHCCCCCEEEEECCCEEEEECCCEEECCCCCEEEEECCCCCC
FGGIVGYDFGGFRLETEVGYRRAYNQEVDIAGTVYTKPQGHADALSFMVNGMLDFGPDDG
CCCEEEECCCCEEEEECCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
MQGFVGGGVGVARAKYWINTPGGELNDSDTGFAWQAIAGIRVPVSDSVDVGLKYRFFNAD
CCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCC
KVDLVTDGGDSARTRFRSHSLLGTLTFNFGGAAPVEETPPPPPPPPPPPPPPPPPPPPAP
CEEEEECCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VCNKGPYIVFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADRSGTVKYNQGLS
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCC
ERRNASVRSYLTTHGVPDGSITSQAFGESNPRVPTADGVRELQNRRVEITYGPGSGM
HHHCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCC
>Mature Secondary Structure
MRKLVLGVALASSALASPALARNDSWYVEADAGAMILEDSEFKVDGVDAAAILDSHTGYD
CCCEEEEHHHHHHHHCCCHHCCCCCEEEEECCCEEEEECCCEEECCCCCEEEEECCCCCC
FGGIVGYDFGGFRLETEVGYRRAYNQEVDIAGTVYTKPQGHADALSFMVNGMLDFGPDDG
CCCEEEECCCCEEEEECCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
MQGFVGGGVGVARAKYWINTPGGELNDSDTGFAWQAIAGIRVPVSDSVDVGLKYRFFNAD
CCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCC
KVDLVTDGGDSARTRFRSHSLLGTLTFNFGGAAPVEETPPPPPPPPPPPPPPPPPPPPAP
CEEEEECCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VCNKGPYIVFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADRSGTVKYNQGLS
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCC
ERRNASVRSYLTTHGVPDGSITSQAFGESNPRVPTADGVRELQNRRVEITYGPGSGM
HHHCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA