Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201135

Identifier: 87201135

GI number: 87201135

Start: 3335824

End: 3336375

Strand: Direct

Name: 87201135

Synonym: Saro_3123

Alternate gene names: NA

Gene position: 3335824-3336375 (Clockwise)

Preceding gene: 87201134

Following gene: 87201136

Centisome position: 93.66

GC content: 69.93

Gene sequence:

>552_bases
ATGATGCGGGCAATTGTCGCACCGCCAGCCCTTTCTTCGGCGGCGCTCAACGAATTGAAGGCCTGGCTGGGCATTACCCG
CAGCGCCGACGACGCCGAGCTTGGCGCGCTGCTGCGCGCCGCACTCGATGTGTGCGAGGGATTCATCGGCGCGGCGCCGT
TGCAAATGGGCTGCGAGGACACGCTGGTCGCCAGCGGCCTGTGGCAGGAGCTTTCGGCCCAGCCGGTGCGTGCGATCACC
GCGCTTGCCCTGATCGACAATACCGGAACGCGCACCGCGCTTGGCGCGGGCGAATACGAGTTCGACATCGATGCCGAGGG
CCGCGGGAGGGTGCGTCTTGCGCGACCTGCCGACCAGACGCGCATGGTGGCGACATATTCGGCGGGTCTGGCAAGCGACT
GGACGGGCCTGCCCGACGCGATCCGTCACGGCATCCTGCGGCTCGCCGCGCACCAGCACCGCGCCCGTGACATCGAGGGC
AAGGCGGCGCCCCTTCCCCCGGCTGCAGTCGCGGCGCTGTGGCGGCCCTGGCGGCGGATGCGCATCGCATGA

Upstream 100 bases:

>100_bases
CGGACGCGCGGCCCCGTGCCGCCGCGACCGGCCGGCCCGTGGAAGTCCCCCTGCTTCCACGGGCCACCCCCTTTTCCATT
CACCATCACCGGAGATTGCC

Downstream 100 bases:

>100_bases
TCGAGGCGCGCGCCGACACGGCAGGGCTGGCGCGCCGGCTCGAGGACAAGGCGCGGACGCTGGCAACGGCGCGCGCGGCA
ATGGCGGCGCGGCCCAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MMRAIVAPPALSSAALNELKAWLGITRSADDAELGALLRAALDVCEGFIGAAPLQMGCEDTLVASGLWQELSAQPVRAIT
ALALIDNTGTRTALGAGEYEFDIDAEGRGRVRLARPADQTRMVATYSAGLASDWTGLPDAIRHGILRLAAHQHRARDIEG
KAAPLPPAAVAALWRPWRRMRIA

Sequences:

>Translated_183_residues
MMRAIVAPPALSSAALNELKAWLGITRSADDAELGALLRAALDVCEGFIGAAPLQMGCEDTLVASGLWQELSAQPVRAIT
ALALIDNTGTRTALGAGEYEFDIDAEGRGRVRLARPADQTRMVATYSAGLASDWTGLPDAIRHGILRLAAHQHRARDIEG
KAAPLPPAAVAALWRPWRRMRIA
>Mature_183_residues
MMRAIVAPPALSSAALNELKAWLGITRSADDAELGALLRAALDVCEGFIGAAPLQMGCEDTLVASGLWQELSAQPVRAIT
ALALIDNTGTRTALGAGEYEFDIDAEGRGRVRLARPADQTRMVATYSAGLASDWTGLPDAIRHGILRLAAHQHRARDIEG
KAAPLPPAAVAALWRPWRRMRIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19500; Mature: 19500

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRAIVAPPALSSAALNELKAWLGITRSADDAELGALLRAALDVCEGFIGAAPLQMGCED
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCHH
TLVASGLWQELSAQPVRAITALALIDNTGTRTALGAGEYEFDIDAEGRGRVRLARPADQT
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCEEEECCCCCC
RMVATYSAGLASDWTGLPDAIRHGILRLAAHQHRARDIEGKAAPLPPAAVAALWRPWRRM
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
RIA
CCC
>Mature Secondary Structure
MMRAIVAPPALSSAALNELKAWLGITRSADDAELGALLRAALDVCEGFIGAAPLQMGCED
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCHH
TLVASGLWQELSAQPVRAITALALIDNTGTRTALGAGEYEFDIDAEGRGRVRLARPADQT
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCEEEECCCCCC
RMVATYSAGLASDWTGLPDAIRHGILRLAAHQHRARDIEGKAAPLPPAAVAALWRPWRRM
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
RIA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA