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The map label for this gene is 87201134

Identifier: 87201134

GI number: 87201134

Start: 3334561

End: 3335703

Strand: Direct

Name: 87201134

Synonym: Saro_3122

Alternate gene names: NA

Gene position: 3334561-3335703 (Clockwise)

Preceding gene: 87201133

Following gene: 87201135

Centisome position: 93.63

GC content: 66.84

Gene sequence:

>1143_bases
ATGACTACCGAAATCGAAACCAAGGCCGATCCGCTGGCCGGATCGTTCGACATCGTCGAGCGCCAGGACGCGCACGACGC
CGAACTGGCGGCGCTTCGTTCAGAACTGACCGAAGTGAAGGGACGGCTGGAGAAGGCGGGCCGCCTTGCGCTTCGCGCAC
CGCTGGCGGGCGGCGAACCGGGCGGCGCGGCCGATGCCGGATTTGTCGACGGCTATATCCGCCACGGTCGCGAGACCGAG
CTGAAATCGCTTTCCGGCGCGGTGGCGGTGGATGGCGGCTATGCCATTCCGCAGAAGATCGACGAGATGATCGCCCGCCG
CATGGTCGAGATCAGCCCGATCCGTTCGATCGCCAATGTGGTCCGCACCGGCACTTCGGGCTTCCGCCGTCTCGTCTCGA
CCGGCGGCACCGCATCGGGCTGGGTCAGCGAGACCGGCGCCCGTCCCGAAACGGCAAGCCCCAAGCTGGCCGAAATCGCC
CCGCCTTCGGGCGAGCTTTACGCCAATCCTTCGGCCACGCAGGCAATGCTCGAGGATGCAGCCTTCGACGTGGAAAGCTG
GCTGGCCGGCGAGATCGCGACCGAGTTCGCACGGGCCGAAGGCGCCGCCTTCGTCAGCGGGACCGGCACGAACCAGCCCA
AGGGCTTCCTTGCCGCAACGACGAGCGCCGCAGGCGACAGCAGCCGCGCCTTCGGCTCGCTCCAGTTCATCGGTTCGGGC
AACGCGTCGGGCTTCGACACCACGCCGGAGGCCAAGCTCATCGACCTCGTGTGCCAGCTCAAGGCACCGCTGCGCCAGGG
TGCAGCATGGGTGATGAATTCGACCACGCTGGCCGCCGTGCGCAAGCTCAAGACCGCGGACGGAGCGTTCCTTTGGCAGC
CGGGCATGGTCGAAGGACAGCCGGACCGCCTGCTCGGCTATCCTGTGGTCGAGGCCGAGGACATGCCCGATGTCGCCGCC
AACCAGTTCCCGATCGCCTTCGGCAACTTCCGCGCGGGCTATCTCGTCACCGATCGCCGCCAGACCACGATCCTGCGCGA
TCCCTATACCAACAAGCCCTATGTCCAGTTCTATGCCACCCGCCGCGTCGGCGGCCAGGTCATGGACAGCGACGCGATCA
AGCTGCTGAAGATCACCGCCTGA

Upstream 100 bases:

>100_bases
GCGGCACGGCGCCACAGGCGTGACCCCGCAACCCTGACGAAGTTACCACCGGGCCGCCTCATGGGGCGGCCTTTTTCATG
CAGAAAGGACGTTTGGCCCC

Downstream 100 bases:

>100_bases
CCTCCCGGCGGTGATCAATCCGGACGCGCGGCCCCGTGCCGCCGCGACCGGCCGGCCCGTGGAAGTCCCCCTGCTTCCAC
GGGCCACCCCCTTTTCCATT

Product: phage major capsid protein, HK97

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; HK97 Family Capsid Protein; Capsid Protein; Capsid Protein Of Prophage; Phage Capsid Protein; Phage Capsid Protein Gp; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Capsid Family; Phage Prohead Protease; Prophage; Bacteriophage Protein; Phage Capsid Protein-Like Protein; Phage Prohead Protease And Phage Capsid Protein; PhiRv2 Prophage Protein; Phage Phi-C31 Capsid; PhiRV1 Phage Protein; Capsid C; Phage Capsid Family Protein

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTTEIETKADPLAGSFDIVERQDAHDAELAALRSELTEVKGRLEKAGRLALRAPLAGGEPGGAADAGFVDGYIRHGRETE
LKSLSGAVAVDGGYAIPQKIDEMIARRMVEISPIRSIANVVRTGTSGFRRLVSTGGTASGWVSETGARPETASPKLAEIA
PPSGELYANPSATQAMLEDAAFDVESWLAGEIATEFARAEGAAFVSGTGTNQPKGFLAATTSAAGDSSRAFGSLQFIGSG
NASGFDTTPEAKLIDLVCQLKAPLRQGAAWVMNSTTLAAVRKLKTADGAFLWQPGMVEGQPDRLLGYPVVEAEDMPDVAA
NQFPIAFGNFRAGYLVTDRRQTTILRDPYTNKPYVQFYATRRVGGQVMDSDAIKLLKITA

Sequences:

>Translated_380_residues
MTTEIETKADPLAGSFDIVERQDAHDAELAALRSELTEVKGRLEKAGRLALRAPLAGGEPGGAADAGFVDGYIRHGRETE
LKSLSGAVAVDGGYAIPQKIDEMIARRMVEISPIRSIANVVRTGTSGFRRLVSTGGTASGWVSETGARPETASPKLAEIA
PPSGELYANPSATQAMLEDAAFDVESWLAGEIATEFARAEGAAFVSGTGTNQPKGFLAATTSAAGDSSRAFGSLQFIGSG
NASGFDTTPEAKLIDLVCQLKAPLRQGAAWVMNSTTLAAVRKLKTADGAFLWQPGMVEGQPDRLLGYPVVEAEDMPDVAA
NQFPIAFGNFRAGYLVTDRRQTTILRDPYTNKPYVQFYATRRVGGQVMDSDAIKLLKITA
>Mature_379_residues
TTEIETKADPLAGSFDIVERQDAHDAELAALRSELTEVKGRLEKAGRLALRAPLAGGEPGGAADAGFVDGYIRHGRETEL
KSLSGAVAVDGGYAIPQKIDEMIARRMVEISPIRSIANVVRTGTSGFRRLVSTGGTASGWVSETGARPETASPKLAEIAP
PSGELYANPSATQAMLEDAAFDVESWLAGEIATEFARAEGAAFVSGTGTNQPKGFLAATTSAAGDSSRAFGSLQFIGSGN
ASGFDTTPEAKLIDLVCQLKAPLRQGAAWVMNSTTLAAVRKLKTADGAFLWQPGMVEGQPDRLLGYPVVEAEDMPDVAAN
QFPIAFGNFRAGYLVTDRRQTTILRDPYTNKPYVQFYATRRVGGQVMDSDAIKLLKITA

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40206; Mature: 40074

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEIETKADPLAGSFDIVERQDAHDAELAALRSELTEVKGRLEKAGRLALRAPLAGGEP
CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
GGAADAGFVDGYIRHGRETELKSLSGAVAVDGGYAIPQKIDEMIARRMVEISPIRSIANV
CCCCCCHHHHHHHHCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VRTGTSGFRRLVSTGGTASGWVSETGARPETASPKLAEIAPPSGELYANPSATQAMLEDA
HHCCHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCCCEEECCHHHHHHHHHH
AFDVESWLAGEIATEFARAEGAAFVSGTGTNQPKGFLAATTSAAGDSSRAFGSLQFIGSG
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECC
NASGFDTTPEAKLIDLVCQLKAPLRQGAAWVMNSTTLAAVRKLKTADGAFLWQPGMVEGQ
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEECCCCCCCC
PDRLLGYPVVEAEDMPDVAANQFPIAFGNFRAGYLVTDRRQTTILRDPYTNKPYVQFYAT
CCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCEEEEECCCCCCCEEEEEEE
RRVGGQVMDSDAIKLLKITA
HHCCCEEECCCCEEEEEECC
>Mature Secondary Structure 
TTEIETKADPLAGSFDIVERQDAHDAELAALRSELTEVKGRLEKAGRLALRAPLAGGEP
CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
GGAADAGFVDGYIRHGRETELKSLSGAVAVDGGYAIPQKIDEMIARRMVEISPIRSIANV
CCCCCCHHHHHHHHCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VRTGTSGFRRLVSTGGTASGWVSETGARPETASPKLAEIAPPSGELYANPSATQAMLEDA
HHCCHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCCCEEECCHHHHHHHHHH
AFDVESWLAGEIATEFARAEGAAFVSGTGTNQPKGFLAATTSAAGDSSRAFGSLQFIGSG
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECC
NASGFDTTPEAKLIDLVCQLKAPLRQGAAWVMNSTTLAAVRKLKTADGAFLWQPGMVEGQ
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEECCCCCCCC
PDRLLGYPVVEAEDMPDVAANQFPIAFGNFRAGYLVTDRRQTTILRDPYTNKPYVQFYAT
CCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCEEEEECCCCCCCEEEEEEE
RRVGGQVMDSDAIKLLKITA
HHCCCEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA