| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201122
Identifier: 87201122
GI number: 87201122
Start: 3325240
End: 3325479
Strand: Direct
Name: 87201122
Synonym: Saro_3110
Alternate gene names: NA
Gene position: 3325240-3325479 (Clockwise)
Preceding gene: 87201120
Following gene: 87201123
Centisome position: 93.36
GC content: 60.42
Gene sequence:
>240_bases ATGGACCGCGCCGCAACCGCCGAGAAGATCGCAGAACTGATCGCCCCCTTCAACAAGAAGGGCGTCGCGATCACCGACGC GACCACCTTCGCCGGCGACCTCGAGTGGGACAGCCTGACGGTGATGGACTTCGTCGCCGAGATCGAGGACGAATTCGACA TCATCATCAGCATGAACCAGCAGGCCGAGATCGAGAACTATGGCCAGCTCGTCGATGCGGTGACGAAGCTGCAGGGATAA
Upstream 100 bases:
>100_bases GATGACACAGGGCGGGCGCGCTTGACAAGCCGCGGCAAAGGCCGCTTTTCCGCCGCAATCATCTGGCAGTGCGCCAGCCT GCCTATCGGAGAAGAATTAG
Downstream 100 bases:
>100_bases GCCAATGACGGATCTTTTCAGCAAGTTCGACCCGCTGATCGAACAGCGCCGCGCGTTGCTGGCGGGCGGGGTCGAAGACC CGTTCAACCTGGTGATGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MDRAATAEKIAELIAPFNKKGVAITDATTFAGDLEWDSLTVMDFVAEIEDEFDIIISMNQQAEIENYGQLVDAVTKLQG
Sequences:
>Translated_79_residues MDRAATAEKIAELIAPFNKKGVAITDATTFAGDLEWDSLTVMDFVAEIEDEFDIIISMNQQAEIENYGQLVDAVTKLQG >Mature_79_residues MDRAATAEKIAELIAPFNKKGVAITDATTFAGDLEWDSLTVMDFVAEIEDEFDIIISMNQQAEIENYGQLVDAVTKLQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8682; Mature: 8682
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRAATAEKIAELIAPFNKKGVAITDATTFAGDLEWDSLTVMDFVAEIEDEFDIIISMNQ CCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC QAEIENYGQLVDAVTKLQG CCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDRAATAEKIAELIAPFNKKGVAITDATTFAGDLEWDSLTVMDFVAEIEDEFDIIISMNQ CCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC QAEIENYGQLVDAVTKLQG CCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA