| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201106
Identifier: 87201106
GI number: 87201106
Start: 3314172
End: 3315026
Strand: Reverse
Name: 87201106
Synonym: Saro_3094
Alternate gene names: NA
Gene position: 3315026-3314172 (Counterclockwise)
Preceding gene: 87201108
Following gene: 87201105
Centisome position: 93.08
GC content: 67.25
Gene sequence:
>855_bases ATGCGTAGAGTCCTCGCCCTGCTTGCCGTTCTTGCTCTGCCGGCCACGCCGGTCGTGGCGCAGCACGCGGACCACGCCGG GCACGCGGCAGCCATCGACCCCGCGCTGGCCGCAGCCGTCGCCGATCCCCTGCGCGAGAAGGACCGCGCCCGCGACAAGT ATCGCAAGCCCGACGAGACGCTTGCCTTCTTCCAGGTCGCGCCGACGATGAAGGTCGGCGAATATGCACCCGGCGGCGGA TGGTACTCGCGCCTGCTCGGGCTCTATCTCGGACCCAAGGGCAAGCTCGTCGGCCTGTACTTCGATCCCACCACCGGCGC CTTCTCTGCCGAGGCGCAGAAGGGCATCCGCGAAGGCGCCGCGAAGTATCCTGCAGAAGTGGCGGCCTGGTCCGGCCAGC CAGCGGATCGCTTCGCCGCCTATCCCCTCGATGCCGTGCCGGAACGCGAAAAGGGGACGTTCGACCGCATCCTGGTGATG CGCATGATGCACAACCTGCTGCGCTGGAACATCGCCGACCACGAGATCAGGCGCATGCGTGAATTGCTCAAGCCGGACGG GATGATCGGCATCGAACAGCACCGCGCCCGGCCCGACGCGCCCTTTGCCTTCACCGATGGCTCGAAGGGCTATCTGCGCG AGGCGGATGTCATCAAGTTCATGGAAGTGAACGGCTTCTCCTTCGTCGGGCGGAGCGAGGCCAATGCCAATGCCGCCGAT CCCGCCAACTGGCCCGAGGGCGTGTGGACCCTGCCGCCAAGCCTGAGCGGGGCGAAGGACGAGGCGGACAAGGCCCGGCT CCGTGCTATTGGCGAAAGCGACCGGATGACGCTGCTGTTCCGCAAGCGCCCGTGA
Upstream 100 bases:
>100_bases GGCCGTTGCTTGTTCGCTCATGCGTCTTATTCTCCTTGGATCGCCCAGAGATAGGCAGGCGCCCCGCGCTTGTCATCGGT TGCCCAAGGAGAATCGCCGG
Downstream 100 bases:
>100_bases TTCGGAACGGCAACGGTTGAATTGGCAAGGCGGGGGGCCTAGTTCGGCTGCCATGACCGAGATCACCGTCGCCGCCCTGC AGCTCCCTCTCGGGGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRRVLALLAVLALPATPVVAQHADHAGHAAAIDPALAAAVADPLREKDRARDKYRKPDETLAFFQVAPTMKVGEYAPGGG WYSRLLGLYLGPKGKLVGLYFDPTTGAFSAEAQKGIREGAAKYPAEVAAWSGQPADRFAAYPLDAVPEREKGTFDRILVM RMMHNLLRWNIADHEIRRMRELLKPDGMIGIEQHRARPDAPFAFTDGSKGYLREADVIKFMEVNGFSFVGRSEANANAAD PANWPEGVWTLPPSLSGAKDEADKARLRAIGESDRMTLLFRKRP
Sequences:
>Translated_284_residues MRRVLALLAVLALPATPVVAQHADHAGHAAAIDPALAAAVADPLREKDRARDKYRKPDETLAFFQVAPTMKVGEYAPGGG WYSRLLGLYLGPKGKLVGLYFDPTTGAFSAEAQKGIREGAAKYPAEVAAWSGQPADRFAAYPLDAVPEREKGTFDRILVM RMMHNLLRWNIADHEIRRMRELLKPDGMIGIEQHRARPDAPFAFTDGSKGYLREADVIKFMEVNGFSFVGRSEANANAAD PANWPEGVWTLPPSLSGAKDEADKARLRAIGESDRMTLLFRKRP >Mature_284_residues MRRVLALLAVLALPATPVVAQHADHAGHAAAIDPALAAAVADPLREKDRARDKYRKPDETLAFFQVAPTMKVGEYAPGGG WYSRLLGLYLGPKGKLVGLYFDPTTGAFSAEAQKGIREGAAKYPAEVAAWSGQPADRFAAYPLDAVPEREKGTFDRILVM RMMHNLLRWNIADHEIRRMRELLKPDGMIGIEQHRARPDAPFAFTDGSKGYLREADVIKFMEVNGFSFVGRSEANANAAD PANWPEGVWTLPPSLSGAKDEADKARLRAIGESDRMTLLFRKRP
Specific function: Unknown
COG id: COG4798
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31250; Mature: 31250
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLALLAVLALPATPVVAQHADHAGHAAAIDPALAAAVADPLREKDRARDKYRKPDET CHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LAFFQVAPTMKVGEYAPGGGWYSRLLGLYLGPKGKLVGLYFDPTTGAFSAEAQKGIREGA EEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH AKYPAEVAAWSGQPADRFAAYPLDAVPEREKGTFDRILVMRMMHNLLRWNIADHEIRRMR HHCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH ELLKPDGMIGIEQHRARPDAPFAFTDGSKGYLREADVIKFMEVNGFSFVGRSEANANAAD HHHCCCCCEEHHHHCCCCCCCEEEECCCCCCCCHHHHEEEEEECCCEEECCCCCCCCCCC PANWPEGVWTLPPSLSGAKDEADKARLRAIGESDRMTLLFRKRP CCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MRRVLALLAVLALPATPVVAQHADHAGHAAAIDPALAAAVADPLREKDRARDKYRKPDET CHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LAFFQVAPTMKVGEYAPGGGWYSRLLGLYLGPKGKLVGLYFDPTTGAFSAEAQKGIREGA EEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH AKYPAEVAAWSGQPADRFAAYPLDAVPEREKGTFDRILVMRMMHNLLRWNIADHEIRRMR HHCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH ELLKPDGMIGIEQHRARPDAPFAFTDGSKGYLREADVIKFMEVNGFSFVGRSEANANAAD HHHCCCCCEEHHHHCCCCCCCEEEECCCCCCCCHHHHEEEEEECCCEEECCCCCCCCCCC PANWPEGVWTLPPSLSGAKDEADKARLRAIGESDRMTLLFRKRP CCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA