Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201085

Identifier: 87201085

GI number: 87201085

Start: 3292116

End: 3293099

Strand: Reverse

Name: 87201085

Synonym: Saro_3073

Alternate gene names: NA

Gene position: 3293099-3292116 (Counterclockwise)

Preceding gene: 87201086

Following gene: 87201084

Centisome position: 92.46

GC content: 65.45

Gene sequence:

>984_bases
ATGATGGCGCTCAAGACACGCATCACCCAGATGCTCGGCATCGAGCATCCGATCGTCCAGGGCGGGATGATGAACGTCGG
CTATGCCGAACTGGCAAGCGCGGTTTCCAACGCGGGCGGCCTCGGCATCATAACCGCGCTGACCCAGCCCACGCCCGAGG
CCCTGCGCGACGAGATCGAGCGCACCAAGGCAATGACGTCGAAGCCGTTCGGCGTGAACATGACCATCTTCCCGACCGTC
AATTCGCCCGACTACAAGGCCTATGCCCAGGCCATCATCGATGGCGGCGTGAAGATCGTCGAGACCGCCGGGACCCAGGC
CGTGCGCGAGATCTGGGAAATGCTCAAGCCCCACGGCGTGACGATCCTGCATAAGTGCACCGCCGTCCGCCATGCGCTCT
CGGCCGAAAGGGCGGGTTGCGACATCATCTCGATCGACGGCTTCGAATGCGCCGGCCACCCCGGCGAGGACGACATTCCC
GGCCTGATCCTGATCCCCGCCGCGGCAGACAAGGTGAAGATCCCGCTGCTCGCTTCTGGCGGGTTCGGTGACGGGCGCGG
CCTGGTCGCGGCTCTCGCACTCGGCGCGGAGGGCATAAACATGGGCACGCGCTTCTGCGCCACGGTCGAGGCGCCGATCC
ACGAGAACGTGAAGCAGGCCTATATCGACAACGACGAGCGGGGCAGCTTCCTGATCTTCCGCAATTTCAAGAACACCGCG
CGCGTCGGGCGCAGCGCCGTATCGGAAGAGGTGGTGCGCCGCCTGTCGAAGCCCGATGCCGTGTTCGAGGACGTGCGCGA
ACTGGTGGCCGGAACCGCCGGCAAGGAACTCTTGCAGACCGGCGATCTTTCCCGGGGCGTGTTCTGGGCCGGCATGGTCC
AGGGCCTGATCCACGACATTCCCACCTGCCAGCAGCTGATCGAGCGTATCGTGGCCGACGCCGAGGACATCATCCGGGGC
AGGCTCGGAGGGTTCCTGGCATGA

Upstream 100 bases:

>100_bases
CTGCGCATGGCGCTCGGAGAGGGGTACGATATTCTCTAAGCGGCTTGCCATCGTTCCCAATAGCGTTTAACCGATCGGTT
AAACGCTATTGGGAGAGGCA

Downstream 100 bases:

>100_bases
AGATCGACAGCACGACCAGCGCGGTCGTCACCGGCGGTGCATCCGGCCTCGGCCGCGCAACGGCAGAGGCGCTCGCGGCC
GCCGGGGTGAAGGTCGCCAT

Product: 2-nitropropane dioxygenase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIERTKAMTSKPFGVNMTIFPTV
NSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGVTILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIP
GLILIPAAADKVKIPLLASGGFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA
RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDIPTCQQLIERIVADAEDIIRG
RLGGFLA

Sequences:

>Translated_327_residues
MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIERTKAMTSKPFGVNMTIFPTV
NSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGVTILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIP
GLILIPAAADKVKIPLLASGGFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA
RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDIPTCQQLIERIVADAEDIIRG
RLGGFLA
>Mature_327_residues
MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIERTKAMTSKPFGVNMTIFPTV
NSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGVTILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIP
GLILIPAAADKVKIPLLASGGFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA
RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDIPTCQQLIERIVADAEDIIRG
RLGGFLA

Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 34873; Mature: 34873

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIE
CCHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
RTKAMTSKPFGVNMTIFPTVNSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGV
HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCC
TILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIPGLILIPAAADKVKIPLLASG
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECC
GFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA
CCCCCHHHHHHHHHCCCCCCCCCHHEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCHHH
RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC
PTCQQLIERIVADAEDIIRGRLGGFLA
HHHHHHHHHHHHCHHHHHHHHHCCCCC
>Mature Secondary Structure
MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIE
CCHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
RTKAMTSKPFGVNMTIFPTVNSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGV
HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCC
TILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIPGLILIPAAADKVKIPLLASG
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECC
GFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA
CCCCCHHHHHHHHHCCCCCCCCCHHEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCHHH
RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC
PTCQQLIERIVADAEDIIRGRLGGFLA
HHHHHHHHHHHHCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]