Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201034

Identifier: 87201034

GI number: 87201034

Start: 3233743

End: 3234369

Strand: Direct

Name: 87201034

Synonym: Saro_3022

Alternate gene names: NA

Gene position: 3233743-3234369 (Clockwise)

Preceding gene: 87201033

Following gene: 87201035

Centisome position: 90.8

GC content: 57.89

Gene sequence:

>627_bases
ATGGCAATCATGGCAACAGATACAGGCGGTGGCGGCGACTTTAGCCCCGTCCCTCCTGGCACTCACTTTGCTGTTTGCGA
TCAGGTTGTGGACCTTGGCAAGCAGAAGTCCGAATTTCAGGGCGAAGTGAAGGTCCAGCACAAGGTTTACATTCGCTGGC
AAATCCCTGCCGAGCGCGTCGAATGGGAGCATGACGGGAAAAAGCATGAAGGGCCTGCCGTTATCGGCAAGACCTATACG
CTTTCCCTGAGCGACAAGGCCAACCTGCGCAAGGATTTGCAGGCATGGCGCAGCAAGCCATTCACGCCTGATGAACTGCG
CGGCTTCGACATTGCCAAGCTTCTCGGCGCGCCTGCGACCATCACCATCACGCACACCGAAAAGGACGGCAAGACGTATG
CCAACGTCGCCAGTCTTGGCAGCATCCCCAAGGGTATGCCGAAGCCGGAAGCAGAAGGTGAATTGCTGATCTACGACGCC
GACAATATGGGTACGTTCGATAAGCTGTCCAAGCGCATGCAGGAGCGCATTCGCGCGCAGATCGTCGACACCGGCAAGAC
CGAAGCAGGTGATCCGGACGCATGGCGCAGCGGCGGCGAAGACCTCGACGACGACATTCCCTTCTAA

Upstream 100 bases:

>100_bases
GCCCTGCCGCGCGCCGGGAAATCCCTGGCGTGACGTTCACCGAACAAAAGCGGGCAGCTTAACCAACCCACCAACCACCA
CGAACGGAAGGAAAGTAGAA

Downstream 100 bases:

>100_bases
CCAGTCACTACCCGGTAATCCGGGCTTACCCGCGCGCTGGCAGACCGCGTGTGAACGTCTGCCACAATTGAATGAGGTAT
GTATGCGCAATCCGACCATC

Product: putative phage associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAIMATDTGGGGDFSPVPPGTHFAVCDQVVDLGKQKSEFQGEVKVQHKVYIRWQIPAERVEWEHDGKKHEGPAVIGKTYT
LSLSDKANLRKDLQAWRSKPFTPDELRGFDIAKLLGAPATITITHTEKDGKTYANVASLGSIPKGMPKPEAEGELLIYDA
DNMGTFDKLSKRMQERIRAQIVDTGKTEAGDPDAWRSGGEDLDDDIPF

Sequences:

>Translated_208_residues
MAIMATDTGGGGDFSPVPPGTHFAVCDQVVDLGKQKSEFQGEVKVQHKVYIRWQIPAERVEWEHDGKKHEGPAVIGKTYT
LSLSDKANLRKDLQAWRSKPFTPDELRGFDIAKLLGAPATITITHTEKDGKTYANVASLGSIPKGMPKPEAEGELLIYDA
DNMGTFDKLSKRMQERIRAQIVDTGKTEAGDPDAWRSGGEDLDDDIPF
>Mature_207_residues
AIMATDTGGGGDFSPVPPGTHFAVCDQVVDLGKQKSEFQGEVKVQHKVYIRWQIPAERVEWEHDGKKHEGPAVIGKTYTL
SLSDKANLRKDLQAWRSKPFTPDELRGFDIAKLLGAPATITITHTEKDGKTYANVASLGSIPKGMPKPEAEGELLIYDAD
NMGTFDKLSKRMQERIRAQIVDTGKTEAGDPDAWRSGGEDLDDDIPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22868; Mature: 22737

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIMATDTGGGGDFSPVPPGTHFAVCDQVVDLGKQKSEFQGEVKVQHKVYIRWQIPAERV
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCHHHH
EWEHDGKKHEGPAVIGKTYTLSLSDKANLRKDLQAWRSKPFTPDELRGFDIAKLLGAPAT
CCCCCCCCCCCCEEECEEEEEEECCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCCEE
ITITHTEKDGKTYANVASLGSIPKGMPKPEAEGELLIYDADNMGTFDKLSKRMQERIRAQ
EEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
IVDTGKTEAGDPDAWRSGGEDLDDDIPF
HHCCCCCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AIMATDTGGGGDFSPVPPGTHFAVCDQVVDLGKQKSEFQGEVKVQHKVYIRWQIPAERV
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCHHHH
EWEHDGKKHEGPAVIGKTYTLSLSDKANLRKDLQAWRSKPFTPDELRGFDIAKLLGAPAT
CCCCCCCCCCCCEEECEEEEEEECCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCCEE
ITITHTEKDGKTYANVASLGSIPKGMPKPEAEGELLIYDADNMGTFDKLSKRMQERIRAQ
EEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
IVDTGKTEAGDPDAWRSGGEDLDDDIPF
HHCCCCCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA