Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201015

Identifier: 87201015

GI number: 87201015

Start: 3219642

End: 3221714

Strand: Reverse

Name: 87201015

Synonym: Saro_3003

Alternate gene names: NA

Gene position: 3221714-3219642 (Counterclockwise)

Preceding gene: 87201016

Following gene: 87201014

Centisome position: 90.46

GC content: 61.22

Gene sequence:

>2073_bases
ATGGCCGACGAACTCTACGAACCCGATGATGCTCTTGAAGAGCAGACCCGCGACGAGGAAAAGCTGCGCGAGGTCCATGC
CCGCGCGCTTGCCCGGTTCGATGCCATCGCCTCCGCGACGCAGGAATGCCGCGCCAAGAGCCTGGAAGCCCGCCGCTTCA
TCACGATCCCCGGTGCGCAGTGGGAAGGCGAGTGGGGCGAGCAGTTCGATAACTCGATCAAGCTCGAAGTTGACAAGGTT
GGTCGCGGCGTCGCCAAGATCGAAACCGACTACCGCGAAAACCGCATCATCCCGGACTTCCGCCCCGATGGCCCGAATGC
CGATCAGGATACGGCGGATATGCTCGATGGTCTGCACCGTGCCGACAGCTATCGGTTCAAGTCGCAGCAGGCCCGCGACA
ATGCGTTCTTCGAGGCCGTTGCCGGTGGCTTCGGTGCCTATCGCCTGACCAATGAATGGGAAGACGAGAGCGACAAGGAC
AACGACCACCAGCGCGTCAACCCGGCATCGATCATTGTTGACGCTGACCAGTCGGTGTTCTTCGATCTACAGGCGCGCAT
GTATGACAAGTCCGATGCGCGCTTTGCCTTAGTCCGGACCAAGCTGACCCGCGAAGCGTTCGAGGATGAGTATGACGGCT
GCTATTCCGAATGGCCCGAGGCTCCGCGCTGGAAGTTCACGGACTGGTTTGCGCCGGATACCGTGGCCATCGCGGAATAC
TACGAGCGCGAGGAAGTATCGGACACGCTCCATATCCTGACCAACAAGCTCTCTGGCGAGGAATTGCGCCTGTGGGCTTC
GGACATGGAAAAGGGCGTTCTGGCGCAATACAAGGCCGATGGCTGGGCGGTCAAAAGCCAGAAGCGGAAGCGCTGCCGGG
TCCACAAGTATGTACTGTCCGGTGCCGAGGTTCTGGAGGACTGCGGTTATATCGCGGGCACCGAACTCCCCATCGTTCCG
GTCTACGGCAAGCGCTATTTCGTTGACGGCATCGAACGGTGGAACGGTTACGTCCAGCCCAAGATGGACAGCCAGCGGCT
TTACAATTCCAACGTGTCGAAGCTGGCGGAAACCAATGCGCTTTCGCCGCGTGAGGTGCCGATCTTCGATCCGACGCAGA
TCGATGCCGTGCAGGAAGGCCAGTGGGCGCGAGCGAATATTGACCGCCTGCCGTACCTGACTGCCCATGCGCTGCGGAAC
CCCGACGGTTCGGTTGCTATGGCTGGGCCGATTGGCAAGGTGGAGCCGCCGACGCTCGCACCGGTCACGGCGACCCTGTT
GCAGATCGCCAACCAGGACTTGCAGGAAGAGCTTAACGACGGCGCGGACGAGGTAAAGGCCAACACCTCTGCCGAGGCGA
TGGACATTGCAGCCGCGCGCGTTGATGCGAAGTCGGGCATCTATCTCGACAACATGCGCCAGTCCGTGCAGCGCGAGGGC
GAGATCTACATCTCCATGGCGTCCGAGGTCTATTCCGAGGAAGGCCGCGAAGTCCGCACCATGACTGAGGATGGTGACGA
CGGCACGGCCATCCTCAAGCAGATGAAGACCGATCCCAAGACCGGCGAGAATGCCACGATCAACGATCTGGAGCATGGGC
GCTACAAGGTGATTGCATCGGTCACGGAAGCAACTGCGACCCGCCGTGACAAGACCGTCAAGGCGATGCTTCGCGTTGCC
GAGGTGGCCACTGCTGCGCAGGACATGGAAATGGCGCAGGCTGCCATCGTTACCGCCGTGATGAATACGGACGGCGAAGG
CACCGATGGCTTCATGCAGTGGATGCGCAAGGTCAAGGCGCTCCCGATGGGCCTTGTCGAGCCGAACGACGAAGAAAAGG
CGGAAATGGAACAGGCAGCGCAGAACGTGCAGCCCGATCCCATGGCAAACCTTGCCAACGCACAGGCCAGGCAGTTCGAG
GCGGATGCAGCCAAGAAGGCGGCGGAAGTTGCCGAGACGGAGGCGAACACCCGCTTGCTCGACGCAAAGACCGTGGAGAC
GCTGGAGAAGGCGCAGCAGCCTGCGAACGATCAGCCATCCATCCCGCTCAATCGCGGACCATACGCGGCGTAA

Upstream 100 bases:

>100_bases
CAGCAGTGACCCGGCCTATCCCTAGATCGGTAACAGCGTTCAACAAGCGTTAGACCCGTAAAATAGGCGCATTGGGCGGT
ATGGTTACAATCCCCGCCCG

Downstream 100 bases:

>100_bases
GACCCGTAAAATACCGTCAAAGCCTGCCTCAACCTATCCTCGCGGCCATTCGGCAACCGCTGGGCCGTGAACCGGTGAGG
AAAGGATCGAGATGGCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Portal Protein P; Bacteriophage Portal Protein; APSE-2 Prophage

Number of amino acids: Translated: 690; Mature: 689

Protein sequence:

>690_residues
MADELYEPDDALEEQTRDEEKLREVHARALARFDAIASATQECRAKSLEARRFITIPGAQWEGEWGEQFDNSIKLEVDKV
GRGVAKIETDYRENRIIPDFRPDGPNADQDTADMLDGLHRADSYRFKSQQARDNAFFEAVAGGFGAYRLTNEWEDESDKD
NDHQRVNPASIIVDADQSVFFDLQARMYDKSDARFALVRTKLTREAFEDEYDGCYSEWPEAPRWKFTDWFAPDTVAIAEY
YEREEVSDTLHILTNKLSGEELRLWASDMEKGVLAQYKADGWAVKSQKRKRCRVHKYVLSGAEVLEDCGYIAGTELPIVP
VYGKRYFVDGIERWNGYVQPKMDSQRLYNSNVSKLAETNALSPREVPIFDPTQIDAVQEGQWARANIDRLPYLTAHALRN
PDGSVAMAGPIGKVEPPTLAPVTATLLQIANQDLQEELNDGADEVKANTSAEAMDIAAARVDAKSGIYLDNMRQSVQREG
EIYISMASEVYSEEGREVRTMTEDGDDGTAILKQMKTDPKTGENATINDLEHGRYKVIASVTEATATRRDKTVKAMLRVA
EVATAAQDMEMAQAAIVTAVMNTDGEGTDGFMQWMRKVKALPMGLVEPNDEEKAEMEQAAQNVQPDPMANLANAQARQFE
ADAAKKAAEVAETEANTRLLDAKTVETLEKAQQPANDQPSIPLNRGPYAA

Sequences:

>Translated_690_residues
MADELYEPDDALEEQTRDEEKLREVHARALARFDAIASATQECRAKSLEARRFITIPGAQWEGEWGEQFDNSIKLEVDKV
GRGVAKIETDYRENRIIPDFRPDGPNADQDTADMLDGLHRADSYRFKSQQARDNAFFEAVAGGFGAYRLTNEWEDESDKD
NDHQRVNPASIIVDADQSVFFDLQARMYDKSDARFALVRTKLTREAFEDEYDGCYSEWPEAPRWKFTDWFAPDTVAIAEY
YEREEVSDTLHILTNKLSGEELRLWASDMEKGVLAQYKADGWAVKSQKRKRCRVHKYVLSGAEVLEDCGYIAGTELPIVP
VYGKRYFVDGIERWNGYVQPKMDSQRLYNSNVSKLAETNALSPREVPIFDPTQIDAVQEGQWARANIDRLPYLTAHALRN
PDGSVAMAGPIGKVEPPTLAPVTATLLQIANQDLQEELNDGADEVKANTSAEAMDIAAARVDAKSGIYLDNMRQSVQREG
EIYISMASEVYSEEGREVRTMTEDGDDGTAILKQMKTDPKTGENATINDLEHGRYKVIASVTEATATRRDKTVKAMLRVA
EVATAAQDMEMAQAAIVTAVMNTDGEGTDGFMQWMRKVKALPMGLVEPNDEEKAEMEQAAQNVQPDPMANLANAQARQFE
ADAAKKAAEVAETEANTRLLDAKTVETLEKAQQPANDQPSIPLNRGPYAA
>Mature_689_residues
ADELYEPDDALEEQTRDEEKLREVHARALARFDAIASATQECRAKSLEARRFITIPGAQWEGEWGEQFDNSIKLEVDKVG
RGVAKIETDYRENRIIPDFRPDGPNADQDTADMLDGLHRADSYRFKSQQARDNAFFEAVAGGFGAYRLTNEWEDESDKDN
DHQRVNPASIIVDADQSVFFDLQARMYDKSDARFALVRTKLTREAFEDEYDGCYSEWPEAPRWKFTDWFAPDTVAIAEYY
EREEVSDTLHILTNKLSGEELRLWASDMEKGVLAQYKADGWAVKSQKRKRCRVHKYVLSGAEVLEDCGYIAGTELPIVPV
YGKRYFVDGIERWNGYVQPKMDSQRLYNSNVSKLAETNALSPREVPIFDPTQIDAVQEGQWARANIDRLPYLTAHALRNP
DGSVAMAGPIGKVEPPTLAPVTATLLQIANQDLQEELNDGADEVKANTSAEAMDIAAARVDAKSGIYLDNMRQSVQREGE
IYISMASEVYSEEGREVRTMTEDGDDGTAILKQMKTDPKTGENATINDLEHGRYKVIASVTEATATRRDKTVKAMLRVAE
VATAAQDMEMAQAAIVTAVMNTDGEGTDGFMQWMRKVKALPMGLVEPNDEEKAEMEQAAQNVQPDPMANLANAQARQFEA
DAAKKAAEVAETEANTRLLDAKTVETLEKAQQPANDQPSIPLNRGPYAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77163; Mature: 77032

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADELYEPDDALEEQTRDEEKLREVHARALARFDAIASATQECRAKSLEARRFITIPGAQ
CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
WEGEWGEQFDNSIKLEVDKVGRGVAKIETDYRENRIIPDFRPDGPNADQDTADMLDGLHR
CCCCHHHHCCCCEEEEHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
ADSYRFKSQQARDNAFFEAVAGGFGAYRLTNEWEDESDKDNDHQRVNPASIIVDADQSVF
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
FDLQARMYDKSDARFALVRTKLTREAFEDEYDGCYSEWPEAPRWKFTDWFAPDTVAIAEY
EEHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHH
YEREEVSDTLHILTNKLSGEELRLWASDMEKGVLAQYKADGWAVKSQKRKRCRVHKYVLS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCEEHHHHHHHHHHHHHHHH
GAEVLEDCGYIAGTELPIVPVYGKRYFVDGIERWNGYVQPKMDSQRLYNSNVSKLAETNA
HHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCEECCCCCHHHHHCCHHHHHHHHCC
LSPREVPIFDPTQIDAVQEGQWARANIDRLPYLTAHALRNPDGSVAMAGPIGKVEPPTLA
CCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCH
PVTATLLQIANQDLQEELNDGADEVKANTSAEAMDIAAARVDAKSGIYLDNMRQSVQREG
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
EIYISMASEVYSEEGREVRTMTEDGDDGTAILKQMKTDPKTGENATINDLEHGRYKVIAS
CEEEEEHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHH
VTEATATRRDKTVKAMLRVAEVATAAQDMEMAQAAIVTAVMNTDGEGTDGFMQWMRKVKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LPMGLVEPNDEEKAEMEQAAQNVQPDPMANLANAQARQFEADAAKKAAEVAETEANTRLL
CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
DAKTVETLEKAQQPANDQPSIPLNRGPYAA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADELYEPDDALEEQTRDEEKLREVHARALARFDAIASATQECRAKSLEARRFITIPGAQ
CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
WEGEWGEQFDNSIKLEVDKVGRGVAKIETDYRENRIIPDFRPDGPNADQDTADMLDGLHR
CCCCHHHHCCCCEEEEHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
ADSYRFKSQQARDNAFFEAVAGGFGAYRLTNEWEDESDKDNDHQRVNPASIIVDADQSVF
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
FDLQARMYDKSDARFALVRTKLTREAFEDEYDGCYSEWPEAPRWKFTDWFAPDTVAIAEY
EEHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHH
YEREEVSDTLHILTNKLSGEELRLWASDMEKGVLAQYKADGWAVKSQKRKRCRVHKYVLS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCEEHHHHHHHHHHHHHHHH
GAEVLEDCGYIAGTELPIVPVYGKRYFVDGIERWNGYVQPKMDSQRLYNSNVSKLAETNA
HHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCEECCCCCHHHHHCCHHHHHHHHCC
LSPREVPIFDPTQIDAVQEGQWARANIDRLPYLTAHALRNPDGSVAMAGPIGKVEPPTLA
CCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCH
PVTATLLQIANQDLQEELNDGADEVKANTSAEAMDIAAARVDAKSGIYLDNMRQSVQREG
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
EIYISMASEVYSEEGREVRTMTEDGDDGTAILKQMKTDPKTGENATINDLEHGRYKVIAS
CEEEEEHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHH
VTEATATRRDKTVKAMLRVAEVATAAQDMEMAQAAIVTAVMNTDGEGTDGFMQWMRKVKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LPMGLVEPNDEEKAEMEQAAQNVQPDPMANLANAQARQFEADAAKKAAEVAETEANTRLL
CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
DAKTVETLEKAQQPANDQPSIPLNRGPYAA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA