| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200971
Identifier: 87200971
GI number: 87200971
Start: 3175995
End: 3177242
Strand: Reverse
Name: 87200971
Synonym: Saro_2959
Alternate gene names: NA
Gene position: 3177242-3175995 (Counterclockwise)
Preceding gene: 87200977
Following gene: 87200970
Centisome position: 89.21
GC content: 64.02
Gene sequence:
>1248_bases ATGTTGCCAGCATCACTACCTGAAAGTCCCACTGCAATGGCCACGCCTCCCACCGAAACCGCGACCATGAGCCCGATCAC ACTGACGCCGCCCGATCCGGTGCCGGTGGTGGCGCCCGCGCAGGCATCGGGACTTGTGCCGGTTTCGGCAGAGAACCGTT CAAAGCTGGAGTCCAAGGTGGACGCCTTCGTCGCGGACCTCGTGGCGCAGGACGCGCAGAGCCCGGAATTCGGCAAGAAG GTCGACCAACTCACCAACATGGGTCGCAAGGAGATCGCGCAGGCAGCGGGCATGTCGAACCGCTTTCTCGACCGCCCGAT CCGCGCGATGGACAAGGACAGCGGCGTGGGCGCCGACCTTGCGGCGTTGCGCCGCACGGTGGAGGAACTGGACCCCGGCC GTCAGGGCAAGCTGTCTTCGGGGCGCAAGATTCTGGGCATCATTCCGTTCGGGAACAGCCTGAAGCGTTATTTCGACGGC TACACTTCCGCGCAGGGTCACATCAAGGCGATCCTCGACCGGCTCGCGTCCGGCAAGGACGAGTTGCTCATGGACAATGC CGCGATCGACGTGGAGCGCCAGAAACTGTGGGAGGCGATGGGCAATCTGGAGCAGATGATCCACATCTCCCGGACGCTTG ATGCAAAGCTTGAAGAAGCGGCGGCGGACCTCGATCACACCGATCCCGCCAAGGCCAAGGCCATCCGCGAGAGCGCGCTG TTCTACACCCGCCAGCGCACGCAGGACCTGCTGACGCAGATGGCGGTGACGGTGCAGGGCTATCTCGCGCTGGACCTTGT CAAGAAGAACAACGTCGAACTGGTGAAGGGCGTGGACCGCGCCAGCACGACGACGGTTGCAGCCCTGCGTACCGCCGTGA CGGTGGCCCAGGCGATGACGAACCAGAGGCTCGTCCTGCAGCAGATCACCGCGCTCAACACCACGACCGCGAACATGATC GATTCGACCGGCAAGCTGCTGCGCGAGCAGACGGGCAAGATCCACGAGATGGCGGCTTCAAGCACGATCCCGCTGGAGAC GCTTCAGCGCGCCTTCCAGAACATCTACGATACGATGGACACGATCGACACGTTCAAGCTCAAGGCGCTGGACGCGATGA AGCAGACGGTCGACACGCTCTCGGGCGAGGTCGAGAAGTCGAAGGGCTACATCGCGCGGGCCGAGGGCGCTTCGCAGGCC AAGCTTGCCGGGCCAGAGACGTCGCCGCTGCTGACGCTGGAGGGTTGA
Upstream 100 bases:
>100_bases TGTCGTTCATGGACATCGGACAACGGTCCGTCGATATGGACGAAGGCGCGGCGCTGTGTTGCGTGTATAAGACAGCTTGC GCGGCAGCGCGCGACATCCC
Downstream 100 bases:
>100_bases GCCGCCGATGGTCAATTCCCCGGCACACGACAGCGCCCGCATCATGTCCGAAGCCCGCCATTCGCTGGTGCGCCAGCAGG CTGGCGGCCGGCGCAGCATC
Product: toxic anion resistance
Products: NA
Alternate protein names: Xic Anion Resistance Protein; Xic Anion Resistance; TelA-Like Protein; Protein Involved In Tellurite Resistance; KlaA Protein; Tellurite Resistance Protein
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MLPASLPESPTAMATPPTETATMSPITLTPPDPVPVVAPAQASGLVPVSAENRSKLESKVDAFVADLVAQDAQSPEFGKK VDQLTNMGRKEIAQAAGMSNRFLDRPIRAMDKDSGVGADLAALRRTVEELDPGRQGKLSSGRKILGIIPFGNSLKRYFDG YTSAQGHIKAILDRLASGKDELLMDNAAIDVERQKLWEAMGNLEQMIHISRTLDAKLEEAAADLDHTDPAKAKAIRESAL FYTRQRTQDLLTQMAVTVQGYLALDLVKKNNVELVKGVDRASTTTVAALRTAVTVAQAMTNQRLVLQQITALNTTTANMI DSTGKLLREQTGKIHEMAASSTIPLETLQRAFQNIYDTMDTIDTFKLKALDAMKQTVDTLSGEVEKSKGYIARAEGASQA KLAGPETSPLLTLEG
Sequences:
>Translated_415_residues MLPASLPESPTAMATPPTETATMSPITLTPPDPVPVVAPAQASGLVPVSAENRSKLESKVDAFVADLVAQDAQSPEFGKK VDQLTNMGRKEIAQAAGMSNRFLDRPIRAMDKDSGVGADLAALRRTVEELDPGRQGKLSSGRKILGIIPFGNSLKRYFDG YTSAQGHIKAILDRLASGKDELLMDNAAIDVERQKLWEAMGNLEQMIHISRTLDAKLEEAAADLDHTDPAKAKAIRESAL FYTRQRTQDLLTQMAVTVQGYLALDLVKKNNVELVKGVDRASTTTVAALRTAVTVAQAMTNQRLVLQQITALNTTTANMI DSTGKLLREQTGKIHEMAASSTIPLETLQRAFQNIYDTMDTIDTFKLKALDAMKQTVDTLSGEVEKSKGYIARAEGASQA KLAGPETSPLLTLEG >Mature_415_residues MLPASLPESPTAMATPPTETATMSPITLTPPDPVPVVAPAQASGLVPVSAENRSKLESKVDAFVADLVAQDAQSPEFGKK VDQLTNMGRKEIAQAAGMSNRFLDRPIRAMDKDSGVGADLAALRRTVEELDPGRQGKLSSGRKILGIIPFGNSLKRYFDG YTSAQGHIKAILDRLASGKDELLMDNAAIDVERQKLWEAMGNLEQMIHISRTLDAKLEEAAADLDHTDPAKAKAIRESAL FYTRQRTQDLLTQMAVTVQGYLALDLVKKNNVELVKGVDRASTTTVAALRTAVTVAQAMTNQRLVLQQITALNTTTANMI DSTGKLLREQTGKIHEMAASSTIPLETLQRAFQNIYDTMDTIDTFKLKALDAMKQTVDTLSGEVEKSKGYIARAEGASQA KLAGPETSPLLTLEG
Specific function: Unknown
COG id: COG3853
COG function: function code P; Uncharacterized protein involved in tellurite resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44774; Mature: 44774
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPASLPESPTAMATPPTETATMSPITLTPPDPVPVVAPAQASGLVPVSAENRSKLESKV CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCEECCCHHHHHHHHH DAFVADLVAQDAQSPEFGKKVDQLTNMGRKEIAQAAGMSNRFLDRPIRAMDKDSGVGADL HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHH AALRRTVEELDPGRQGKLSSGRKILGIIPFGNSLKRYFDGYTSAQGHIKAILDRLASGKD HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCC ELLMDNAAIDVERQKLWEAMGNLEQMIHISRTLDAKLEEAAADLDHTDPAKAKAIRESAL CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FYTRQRTQDLLTQMAVTVQGYLALDLVKKNNVELVKGVDRASTTTVAALRTAVTVAQAMT HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH NQRLVLQQITALNTTTANMIDSTGKLLREQTGKIHEMAASSTIPLETLQRAFQNIYDTMD CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHH TIDTFKLKALDAMKQTVDTLSGEVEKSKGYIARAEGASQAKLAGPETSPLLTLEG HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MLPASLPESPTAMATPPTETATMSPITLTPPDPVPVVAPAQASGLVPVSAENRSKLESKV CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCEECCCHHHHHHHHH DAFVADLVAQDAQSPEFGKKVDQLTNMGRKEIAQAAGMSNRFLDRPIRAMDKDSGVGADL HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHH AALRRTVEELDPGRQGKLSSGRKILGIIPFGNSLKRYFDGYTSAQGHIKAILDRLASGKD HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCC ELLMDNAAIDVERQKLWEAMGNLEQMIHISRTLDAKLEEAAADLDHTDPAKAKAIRESAL CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FYTRQRTQDLLTQMAVTVQGYLALDLVKKNNVELVKGVDRASTTTVAALRTAVTVAQAMT HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH NQRLVLQQITALNTTTANMIDSTGKLLREQTGKIHEMAASSTIPLETLQRAFQNIYDTMD CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHH TIDTFKLKALDAMKQTVDTLSGEVEKSKGYIARAEGASQAKLAGPETSPLLTLEG HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA