Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is qheDH [H]

Identifier: 87200891

GI number: 87200891

Start: 3100898

End: 3103081

Strand: Reverse

Name: qheDH [H]

Synonym: Saro_2878

Alternate gene names: 87200891

Gene position: 3103081-3100898 (Counterclockwise)

Preceding gene: 87200892

Following gene: 87200890

Centisome position: 87.13

GC content: 67.49

Gene sequence:

>2184_bases
ATGATGCGCCAGCTTCTCGCCACCCTGTTCCTTGGCCTCGCCGCCTGCTCCCTCGGCGGCGCGACTGTCCTGACCGAGGG
CGCCGGACGCGAGTGGCCCGGCCCGGGCGGTGACGCCGGCAAGACGCATCACTCGCGCCTGACCGCCATCAACGCGGAGA
ACGTCGGTCGGCTCGGCCTTGCGTGGCAAGTCGAACTTGGCACCCTGCGCGGGCAGGAGGCGACCCCGGTCGTGGTGGAC
GGCGTGCTCTACACCTCGGGCACCACGGGCCGCGCCTATGCGTTCGATGCGGCGACCGGCAAGGAGCTGTGGCGGTTCGA
GCCCGAGGTCGACATGCAGGTCAACCGCACGGTCTGCTGCGACATGGTCAACCGTGGCGTCGCGGTGGGGCGCGGCAAGG
TCTTCGTCGCCAGTCTCGATGGGTGGATGTACGCACTCGATGCCCGCACCGGCGCGGTCGTCTGGAAGAGCGACTTCATC
GAGAACCGAGCCAAGGGCGACAATTCCACCGGCGCTCCCGAAATCGCGGGCGATGTCGTCGTCATCGGCATGGGCGGCGC
GGAGTACGACGTGCGCGGCTATGTCACGGCGCTCGATCTCGATACCGGAAAGCTGCGCTGGCGTTGGCACGTGGTGCCCC
GCGATCCCAAGCTGGGGCCGCAGGAAACGCCCGAACTCGAAGCCGCGCTGAAGACTTGGGACCCGAACAGCCGCTGGGAC
ATCGGCGGCGGTGGCAGCCCGTGGGATGCGATCAACTACGACCCCGAAACCGGCCTGGTCCTTGTCGGCACCGGCAATGG
CGGGCCTTACGCCACGTCCAAGCGCTCGCCTGCGGGGGGCGACAACCTCTACCTCGCCAGCCTCGTCGCGCTCGATCCGA
AGACCGGGCGGATGAAGTGGCACTACCAGGAAACGCCGGGCGACAACTGGGACTTCACCGCCACCCAGCCGATGATCTTC
ACCCGCATGAAGATCGACGGCGAGGACCGGCCAGTCGTGCTCCACGCGCCGAAGAACGGCTATCTCTACATTCTCGACCG
GCGCGACGGAAAACTGCTGCGCGCCAATCCCATCGTCCGCACCAACTGGGCCAAGGGCATCGATCCCGGGACCGGCCGCC
CGATCCTCGATCCCGCGGCCGCCGACTATACCACCGGTCCCAAGATCGTGTTCCCGGCCACGACCGGCGCACGCAACTGG
CACCCCGCCAGCTACGATCCAGCGACCGGGCTCTACATCGGCGCGGTGCTCGACATGGGCAATCTCATCTTCATGACGCC
GGGGGCCAAGCCGCTCAAGGCGCGCGGGCTCAACAACGATGCCGCGCTCATCTTCACGCCGGACGTCAAGGAAGCGCTTG
CCGCCTTCCCGCCTGAATTCGGCGATGCCGTGCGCAAGTTGCCTGCCTATCAGGAGGCGCTGAAGCAGCCTGCCACCGCG
CAGATCCGCGCCATCGATCCGCTAACCGGGAAGACCGTCTGGGCGGCCGATACCGCCGGCTGGCAGGATCGCGGCGGCGT
GCTGACCACGTCTTCGGGCCTTACCATCCATGGCGGCGTCACCGGCAAGCTCTTCGTGCGCGATACGAAAACCGGCAAGC
TCCTGAAGGAAATAGACACCGGCACTCCGATCATGGCCGCGCCGATGACTTACGAGGTTGGCGGCGTGCAGTACATCGCC
GTCATGGCCGGGTGGGGCGGGGGCGGCTATCCCTTCGTCCCGCGCTATTCCGCAGCCTATACGCGCGGCAACATGAACCG
GCTGCTGGTGTTCAAGGTGGGGGGCGGCAAGGTGCCGTTGCCGGACCTGCTCCCGCCGCTGGAAGTGGCGCCGGAACCGC
CGGCACAGGCCGCGGGCGTGACGGCGGCGACCATCGCGCGCGGGCAGGGCCTGTTCTTCGGCAATTGCGCGATCTGTCAC
GCCAACCAGCCCCGCTCGATCACGCCGGACTTGCGCCGGATGCAGCCTGCCACGCACGAGATGTTCCGCGAGATCGTGCT
CGAAGGCCTGCTCACGCCCAATGGCATGCCGCGCTGGAACGACATCCTCTCGACCGACGATGCCGACGCGATCCACGCCT
ACCTGATCGACCTCCAGGGCAAGACGCGCGCGGACGAACTGGCCAAGCAGAAGGCCGGCAAGCCGCTCGATGGGCCTAGT
CTGACGATCCTGAGCAATTACTGA

Upstream 100 bases:

>100_bases
ACATCTCCGAACTGTTCAAGATCGACCACGGCATGATCGAACAGATCGAGGCGAACTTCATAACCGTGCCCTATCGCATG
CCGAGCCCCTGGGATTTGCT

Downstream 100 bases:

>100_bases
TCTGGCAACGCCGACCCTCATCCGGACGGGGCGGGGAGCAATTAGAAAGGCATTCGATGGACTTCTCCACGCTCGACAAT
CCGCGCCTTGAATTCGCCTT

Product: Pyrrolo-quinoline quinone

Products: NA

Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MMRQLLATLFLGLAACSLGGATVLTEGAGREWPGPGGDAGKTHHSRLTAINAENVGRLGLAWQVELGTLRGQEATPVVVD
GVLYTSGTTGRAYAFDAATGKELWRFEPEVDMQVNRTVCCDMVNRGVAVGRGKVFVASLDGWMYALDARTGAVVWKSDFI
ENRAKGDNSTGAPEIAGDVVVIGMGGAEYDVRGYVTALDLDTGKLRWRWHVVPRDPKLGPQETPELEAALKTWDPNSRWD
IGGGGSPWDAINYDPETGLVLVGTGNGGPYATSKRSPAGGDNLYLASLVALDPKTGRMKWHYQETPGDNWDFTATQPMIF
TRMKIDGEDRPVVLHAPKNGYLYILDRRDGKLLRANPIVRTNWAKGIDPGTGRPILDPAAADYTTGPKIVFPATTGARNW
HPASYDPATGLYIGAVLDMGNLIFMTPGAKPLKARGLNNDAALIFTPDVKEALAAFPPEFGDAVRKLPAYQEALKQPATA
QIRAIDPLTGKTVWAADTAGWQDRGGVLTTSSGLTIHGGVTGKLFVRDTKTGKLLKEIDTGTPIMAAPMTYEVGGVQYIA
VMAGWGGGGYPFVPRYSAAYTRGNMNRLLVFKVGGGKVPLPDLLPPLEVAPEPPAQAAGVTAATIARGQGLFFGNCAICH
ANQPRSITPDLRRMQPATHEMFREIVLEGLLTPNGMPRWNDILSTDDADAIHAYLIDLQGKTRADELAKQKAGKPLDGPS
LTILSNY

Sequences:

>Translated_727_residues
MMRQLLATLFLGLAACSLGGATVLTEGAGREWPGPGGDAGKTHHSRLTAINAENVGRLGLAWQVELGTLRGQEATPVVVD
GVLYTSGTTGRAYAFDAATGKELWRFEPEVDMQVNRTVCCDMVNRGVAVGRGKVFVASLDGWMYALDARTGAVVWKSDFI
ENRAKGDNSTGAPEIAGDVVVIGMGGAEYDVRGYVTALDLDTGKLRWRWHVVPRDPKLGPQETPELEAALKTWDPNSRWD
IGGGGSPWDAINYDPETGLVLVGTGNGGPYATSKRSPAGGDNLYLASLVALDPKTGRMKWHYQETPGDNWDFTATQPMIF
TRMKIDGEDRPVVLHAPKNGYLYILDRRDGKLLRANPIVRTNWAKGIDPGTGRPILDPAAADYTTGPKIVFPATTGARNW
HPASYDPATGLYIGAVLDMGNLIFMTPGAKPLKARGLNNDAALIFTPDVKEALAAFPPEFGDAVRKLPAYQEALKQPATA
QIRAIDPLTGKTVWAADTAGWQDRGGVLTTSSGLTIHGGVTGKLFVRDTKTGKLLKEIDTGTPIMAAPMTYEVGGVQYIA
VMAGWGGGGYPFVPRYSAAYTRGNMNRLLVFKVGGGKVPLPDLLPPLEVAPEPPAQAAGVTAATIARGQGLFFGNCAICH
ANQPRSITPDLRRMQPATHEMFREIVLEGLLTPNGMPRWNDILSTDDADAIHAYLIDLQGKTRADELAKQKAGKPLDGPS
LTILSNY
>Mature_727_residues
MMRQLLATLFLGLAACSLGGATVLTEGAGREWPGPGGDAGKTHHSRLTAINAENVGRLGLAWQVELGTLRGQEATPVVVD
GVLYTSGTTGRAYAFDAATGKELWRFEPEVDMQVNRTVCCDMVNRGVAVGRGKVFVASLDGWMYALDARTGAVVWKSDFI
ENRAKGDNSTGAPEIAGDVVVIGMGGAEYDVRGYVTALDLDTGKLRWRWHVVPRDPKLGPQETPELEAALKTWDPNSRWD
IGGGGSPWDAINYDPETGLVLVGTGNGGPYATSKRSPAGGDNLYLASLVALDPKTGRMKWHYQETPGDNWDFTATQPMIF
TRMKIDGEDRPVVLHAPKNGYLYILDRRDGKLLRANPIVRTNWAKGIDPGTGRPILDPAAADYTTGPKIVFPATTGARNW
HPASYDPATGLYIGAVLDMGNLIFMTPGAKPLKARGLNNDAALIFTPDVKEALAAFPPEFGDAVRKLPAYQEALKQPATA
QIRAIDPLTGKTVWAADTAGWQDRGGVLTTSSGLTIHGGVTGKLFVRDTKTGKLLKEIDTGTPIMAAPMTYEVGGVQYIA
VMAGWGGGGYPFVPRYSAAYTRGNMNRLLVFKVGGGKVPLPDLLPPLEVAPEPPAQAAGVTAATIARGQGLFFGNCAICH
ANQPRSITPDLRRMQPATHEMFREIVLEGLLTPNGMPRWNDILSTDDADAIHAYLIDLQGKTRADELAKQKAGKPLDGPS
LTILSNY

Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Escherichia coli, GI1786316, Length=653, Percent_Identity=25.114854517611, Blast_Score=125, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR017512
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: =1.1.98.1 [H]

Molecular weight: Translated: 77896; Mature: 77896

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRQLLATLFLGLAACSLGGATVLTEGAGREWPGPGGDAGKTHHSRLTAINAENVGRLGL
CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
AWQVELGTLRGQEATPVVVDGVLYTSGTTGRAYAFDAATGKELWRFEPEVDMQVNRTVCC
EEEEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCHHEEECCCCCEEECCHHHH
DMVNRGVAVGRGKVFVASLDGWMYALDARTGAVVWKSDFIENRAKGDNSTGAPEIAGDVV
HHHHCCEEECCCEEEEEECCCEEEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCEE
VIGMGGAEYDVRGYVTALDLDTGKLRWRWHVVPRDPKLGPQETPELEAALKTWDPNSRWD
EEECCCCCEECEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEE
IGGGGSPWDAINYDPETGLVLVGTGNGGPYATSKRSPAGGDNLYLASLVALDPKTGRMKW
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEE
HYQETPGDNWDFTATQPMIFTRMKIDGEDRPVVLHAPKNGYLYILDRRDGKLLRANPIVR
EEECCCCCCCCEECCCCEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCEEECCCEEE
TNWAKGIDPGTGRPILDPAAADYTTGPKIVFPATTGARNWHPASYDPATGLYIGAVLDMG
ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC
NLIFMTPGAKPLKARGLNNDAALIFTPDVKEALAAFPPEFGDAVRKLPAYQEALKQPATA
CEEEECCCCCCCEECCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHCHHHHHHHCCCCCE
QIRAIDPLTGKTVWAADTAGWQDRGGVLTTSSGLTIHGGVTGKLFVRDTKTGKLLKEIDT
EEEEECCCCCCEEEEECCCCCCCCCCEEEECCCEEEECCCEEEEEEEECCCCHHHHHHCC
GTPIMAAPMTYEVGGVQYIAVMAGWGGGGYPFVPRYSAAYTRGNMNRLLVFKVGGGKVPL
CCCEEECCEEEECCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCC
PDLLPPLEVAPEPPAQAAGVTAATIARGQGLFFGNCAICHANQPRSITPDLRRMQPATHE
HHCCCCCCCCCCCCHHHCCCEEEEHCCCCCEEEECEEEEECCCCCCCCCHHHHCCHHHHH
MFREIVLEGLLTPNGMPRWNDILSTDDADAIHAYLIDLQGKTRADELAKQKAGKPLDGPS
HHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCC
LTILSNY
EEEEECC
>Mature Secondary Structure
MMRQLLATLFLGLAACSLGGATVLTEGAGREWPGPGGDAGKTHHSRLTAINAENVGRLGL
CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
AWQVELGTLRGQEATPVVVDGVLYTSGTTGRAYAFDAATGKELWRFEPEVDMQVNRTVCC
EEEEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCHHEEECCCCCEEECCHHHH
DMVNRGVAVGRGKVFVASLDGWMYALDARTGAVVWKSDFIENRAKGDNSTGAPEIAGDVV
HHHHCCEEECCCEEEEEECCCEEEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCEE
VIGMGGAEYDVRGYVTALDLDTGKLRWRWHVVPRDPKLGPQETPELEAALKTWDPNSRWD
EEECCCCCEECEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEE
IGGGGSPWDAINYDPETGLVLVGTGNGGPYATSKRSPAGGDNLYLASLVALDPKTGRMKW
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEE
HYQETPGDNWDFTATQPMIFTRMKIDGEDRPVVLHAPKNGYLYILDRRDGKLLRANPIVR
EEECCCCCCCCEECCCCEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCEEECCCEEE
TNWAKGIDPGTGRPILDPAAADYTTGPKIVFPATTGARNWHPASYDPATGLYIGAVLDMG
ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC
NLIFMTPGAKPLKARGLNNDAALIFTPDVKEALAAFPPEFGDAVRKLPAYQEALKQPATA
CEEEECCCCCCCEECCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHCHHHHHHHCCCCCE
QIRAIDPLTGKTVWAADTAGWQDRGGVLTTSSGLTIHGGVTGKLFVRDTKTGKLLKEIDT
EEEEECCCCCCEEEEECCCCCCCCCCEEEECCCEEEECCCEEEEEEEECCCCHHHHHHCC
GTPIMAAPMTYEVGGVQYIAVMAGWGGGGYPFVPRYSAAYTRGNMNRLLVFKVGGGKVPL
CCCEEECCEEEECCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCC
PDLLPPLEVAPEPPAQAAGVTAATIARGQGLFFGNCAICHANQPRSITPDLRRMQPATHE
HHCCCCCCCCCCCCHHHCCCEEEEHCCCCCEEEECEEEEECCCCCCCCCHHHHCCHHHHH
MFREIVLEGLLTPNGMPRWNDILSTDDADAIHAYLIDLQGKTRADELAKQKAGKPLDGPS
HHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCC
LTILSNY
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]