| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200872
Identifier: 87200872
GI number: 87200872
Start: 3082415
End: 3083083
Strand: Reverse
Name: 87200872
Synonym: Saro_2859
Alternate gene names: NA
Gene position: 3083083-3082415 (Counterclockwise)
Preceding gene: 87200873
Following gene: 87200865
Centisome position: 86.56
GC content: 66.37
Gene sequence:
>669_bases ATGACTGACTTCGTCCTCGTGCACGGCGCATGGGGCGGCAGCTTCGCGTGGGATCGGCTAAAGGCTGATCTCGTCGCGGC CGGTCATCGCGTCCTCGCCGCCGATCTCACCGGTCTCGGCAAGCGCAAGGCCGGGTTCCACCCCGGCATCACGCTCACCA CCCACACCGACGACGTCTGCGCGCAGATCGCCGATGCGGGTTTCGACCGCTTCGTCCTCGTCGGCCATTCATGGGGCGGC ATGGTCATCACTGGCGTCGCCACGAGGCTGGGCGGGCGGATCGACGCGATCGTCTATGTCGACGCCTTCCTGCCTCAGGA CGGCCAGTCGCTTTGGGACCTGACCGGGCAGTGGGAACATGACCACTACATCTCCAGCCAGAAGCACAGCCCCGGCGCGG TTGCGCCACTGCCCGGCCTCGAAAGCCCGGTCCTCTCGGCCCATCCGCTGCTGACCCTGGTGGAAGCGGTGCGCTTCACC GGCGAGGAAGCGAAAATTCCCCGCCGCATCTACGTCTACGCCAATGGCTGGCAACCGACGCCGTTCGCGAAGTTCGCCGA TGCGGTGCAAGACGACCCGGCCTGGGAATACCACGAGGCCGAAGCCAGCCACAACGTCATGGCCGATCAGCCCGAACAAT TGCTCCGGATCGTGCTGGGCTGCGCCTGA
Upstream 100 bases:
>100_bases ACGGCAAGGTCCGCCTGCACTTCTATCCCTTCGGCGGCCTGACCAAGACGCTCGAATGGATCCACGGCTACAACAAGAAG CACGGCATCGGAGCCTGACG
Downstream 100 bases:
>100_bases TTAGACCCCGTCTCCGTTCGTGTCGAGCGAAGTCGAGACACGAACGGGAGCTTGCGTTCACCCCTGCGCAGCCAGGCTCT GCATACGCTTGAGATAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Facilitator Transporter; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Alpha/Beta Hydrolase Family Protein; Hydrolase; Salicylate Esterase; Hydrolase Alpha/Beta Fold Family Protein; Alkyl Salicylate Esterase; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTDFVLVHGAWGGSFAWDRLKADLVAAGHRVLAADLTGLGKRKAGFHPGITLTTHTDDVCAQIADAGFDRFVLVGHSWGG MVITGVATRLGGRIDAIVYVDAFLPQDGQSLWDLTGQWEHDHYISSQKHSPGAVAPLPGLESPVLSAHPLLTLVEAVRFT GEEAKIPRRIYVYANGWQPTPFAKFADAVQDDPAWEYHEAEASHNVMADQPEQLLRIVLGCA
Sequences:
>Translated_222_residues MTDFVLVHGAWGGSFAWDRLKADLVAAGHRVLAADLTGLGKRKAGFHPGITLTTHTDDVCAQIADAGFDRFVLVGHSWGG MVITGVATRLGGRIDAIVYVDAFLPQDGQSLWDLTGQWEHDHYISSQKHSPGAVAPLPGLESPVLSAHPLLTLVEAVRFT GEEAKIPRRIYVYANGWQPTPFAKFADAVQDDPAWEYHEAEASHNVMADQPEQLLRIVLGCA >Mature_221_residues TDFVLVHGAWGGSFAWDRLKADLVAAGHRVLAADLTGLGKRKAGFHPGITLTTHTDDVCAQIADAGFDRFVLVGHSWGGM VITGVATRLGGRIDAIVYVDAFLPQDGQSLWDLTGQWEHDHYISSQKHSPGAVAPLPGLESPVLSAHPLLTLVEAVRFTG EEAKIPRRIYVYANGWQPTPFAKFADAVQDDPAWEYHEAEASHNVMADQPEQLLRIVLGCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24087; Mature: 23956
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFVLVHGAWGGSFAWDRLKADLVAAGHRVLAADLTGLGKRKAGFHPGITLTTHTDDVC CCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEHHHCCCCCCCCCCCCEEEEECCHHHH AQIADAGFDRFVLVGHSWGGMVITGVATRLGGRIDAIVYVDAFLPQDGQSLWDLTGQWEH HHHHHCCCCEEEEEECCCCCEEHHHHHHHHCCCEEEEEEEEEECCCCCCHHHCCCCCCCC DHYISSQKHSPGAVAPLPGLESPVLSAHPLLTLVEAVRFTGEEAKIPRRIYVYANGWQPT CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC PFAKFADAVQDDPAWEYHEAEASHNVMADQPEQLLRIVLGCA CHHHHHHHHCCCCCCCEEHHCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TDFVLVHGAWGGSFAWDRLKADLVAAGHRVLAADLTGLGKRKAGFHPGITLTTHTDDVC CCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEHHHCCCCCCCCCCCCEEEEECCHHHH AQIADAGFDRFVLVGHSWGGMVITGVATRLGGRIDAIVYVDAFLPQDGQSLWDLTGQWEH HHHHHCCCCEEEEEECCCCCEEHHHHHHHHCCCEEEEEEEEEECCCCCCHHHCCCCCCCC DHYISSQKHSPGAVAPLPGLESPVLSAHPLLTLVEAVRFTGEEAKIPRRIYVYANGWQPT CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC PFAKFADAVQDDPAWEYHEAEASHNVMADQPEQLLRIVLGCA CHHHHHHHHCCCCCCCEEHHCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA