Click here to switch to the map view.

The map label for this gene is yfbL [C]

Identifier: 87200838

GI number: 87200838

Start: 3051535

End: 3053154

Strand: Reverse

Name: yfbL [C]

Synonym: Saro_2825

Alternate gene names: 87200838

Gene position: 3053154-3051535 (Counterclockwise)

Preceding gene: 87200841

Following gene: 87200837

Centisome position: 85.72

GC content: 67.65

Gene sequence:

>1620_bases
ATGAACGTCAAGCTGCTCGTTTCCGCCATGCTTCTCGCCTCGACCGCCGTGCCAGCGCTGGCGGAGGAACCGGTTTTCGA
TCCGCAGGCAGTGCGGGCCCACGTCACGTTCCTTGCCGACGATCTTCTGGAAGGCCGCGACACGGGTTCGCGCGGCTACG
ACATCGCCGCCAGCTACGTCGCCTCGCAGTTCGTCGCGATGGGTCTGAAACCCGCGGGGCCTGACGGTTCCTTCTACCAG
AAGCTGACCGTGCGCGAGGCGCGGCTCGATGGCGCGCCGAAGCTGGCGCTGAACTATGGCGGCAAGGAGACGGTGCTGTC
CGATACGGCCCAGGTGCTGGTGCGGCCGAGCCTGACCGACAAGGCGGTCGCGGTGGATGCGCCGCTGGTCTTCGCCGGCT
TCGGCTTCGACCGTCCGGACCTCGGCTTCGACGACTACAAGGGGCTGGATGCCAAGGGCAAGATCGTGGTCGTGCTCTCG
GGCTTTCCCAAGGGCACGCCGAGCGAGCTTGGCGCGCATCTCAATTCGGAAAAGGCGGTCATGGCGATGAAGCGGGGCGC
GATCGCGGTCATTACCGTGCCGACCACCGAGGACAGCGCGCGCCGCCCGTGGGACAAGCGCGTCGCCATGTCGGACGGCC
CGGCCAAGGGCTGGGTCGGCGCCGACGGCAAGGCCTTTGCCCGCGCGACCGGGATCAGAGGCACGGCGACGCTCAATCCC
GATGCCGCCGCGCCGCTCTTCGCCGCCTCGGGCAAGCCGCTGGCGAGGGTCCTGGCCGAGGCGAACCGCAAGGGCGGCCG
GCCCAGGGGCTTTGCGTTGAAGGCCAGGGCCAGCCTCTCGTTCGCCAATGTCTGGAAGGACGTGACCAGCGAGAACGTGG
TCGCGGTCCTGCCGGGAAGCGACGACAAGCTGGCGGGCGAGTTCGTCGGCATGACCGCTCACCTCGACCACATCGGCATT
CACGGCAAGGGCGAGGACACGCTGCACAACGGCGCGATGGACAACGCCTCGGGCGTGGCGACCATGCTGGAGGTGGCCAG
GGCGGTTGCGCGAGACCGCCCGCGCCGCTCGGTCATGTTCGCGGCGCTCACCGGTGAGGAGGGCGGGCTGATCGGCTCGG
ACTACCTTGCGCGCAATCCGCTGGTGAAAGGCGAAGTGGTCGGCCTCGTCAACTTCGACATGCCGGTGCTGACCTACATG
TTCTCCGATGTCGTCGCGTTCGGGGCGGAGAACTCCACGATGGGGCCGGTGGTGGCAGAGGCCGCGAAGAAGGCGGGGAT
CAAGCTTTCGCCCGACCCCATGCCGGAAGAGGGCCTGTTCACCCGTTCGGACCACTATCGCTTCGTCCAGCAGGGCGTGC
CGGCGGTGTTCATGATGACCGGCTTCGAAGGCCCCGGCGAGAAGGCGTTCCGCGACTTCCTGAAGACCAATTACCACCAG
CCGAGCGACGACTTGAAGTTGCCGTTCAACTGGGAAGCGGGCGCGCTTTTCGCCAAGGTCAACTACTACACCGTGCTGGG
TCTCGCGAACGGCGACGAGCGGCCCCGGTGGTACGCCGGCAGCTTCTTCGGCAAGGAGTTCGCGTCGGGCGCGGCGAAGG
CGGCCGATCCGGCGAAGTAG

Upstream 100 bases:

>100_bases
TGGAAACTTTCTAGTGCCCATGTTCGCGCGCGTGCAAGGGGCGCGGTCCGAATGGGCAGGCACCGTTTGATCCATTTCGA
CGAACAACAAAGAGAGACCG

Downstream 100 bases:

>100_bases
GGGGGGCTGATATCTTCGTCATTGCGAGCGGCTCCGCCGCGCTCGCAATGACGAATGGTTCTGGTTCAAACCCCCTTGCG
CTTGGTCAAGGAACCGCTTC

Product: peptidase M28

Products: NA

Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Glutamate Carboxypeptidase II; Aminopeptidase Family; M23B Family Peptidase; Peptidase Family M; M20/M25/M40 Family Peptidase; Component Of l Biopolymer Transport System; WD40-Like Beta Propeller; PDZ Domain-Containing Protein

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MNVKLLVSAMLLASTAVPALAEEPVFDPQAVRAHVTFLADDLLEGRDTGSRGYDIAASYVASQFVAMGLKPAGPDGSFYQ
KLTVREARLDGAPKLALNYGGKETVLSDTAQVLVRPSLTDKAVAVDAPLVFAGFGFDRPDLGFDDYKGLDAKGKIVVVLS
GFPKGTPSELGAHLNSEKAVMAMKRGAIAVITVPTTEDSARRPWDKRVAMSDGPAKGWVGADGKAFARATGIRGTATLNP
DAAAPLFAASGKPLARVLAEANRKGGRPRGFALKARASLSFANVWKDVTSENVVAVLPGSDDKLAGEFVGMTAHLDHIGI
HGKGEDTLHNGAMDNASGVATMLEVARAVARDRPRRSVMFAALTGEEGGLIGSDYLARNPLVKGEVVGLVNFDMPVLTYM
FSDVVAFGAENSTMGPVVAEAAKKAGIKLSPDPMPEEGLFTRSDHYRFVQQGVPAVFMMTGFEGPGEKAFRDFLKTNYHQ
PSDDLKLPFNWEAGALFAKVNYYTVLGLANGDERPRWYAGSFFGKEFASGAAKAADPAK

Sequences:

>Translated_539_residues
MNVKLLVSAMLLASTAVPALAEEPVFDPQAVRAHVTFLADDLLEGRDTGSRGYDIAASYVASQFVAMGLKPAGPDGSFYQ
KLTVREARLDGAPKLALNYGGKETVLSDTAQVLVRPSLTDKAVAVDAPLVFAGFGFDRPDLGFDDYKGLDAKGKIVVVLS
GFPKGTPSELGAHLNSEKAVMAMKRGAIAVITVPTTEDSARRPWDKRVAMSDGPAKGWVGADGKAFARATGIRGTATLNP
DAAAPLFAASGKPLARVLAEANRKGGRPRGFALKARASLSFANVWKDVTSENVVAVLPGSDDKLAGEFVGMTAHLDHIGI
HGKGEDTLHNGAMDNASGVATMLEVARAVARDRPRRSVMFAALTGEEGGLIGSDYLARNPLVKGEVVGLVNFDMPVLTYM
FSDVVAFGAENSTMGPVVAEAAKKAGIKLSPDPMPEEGLFTRSDHYRFVQQGVPAVFMMTGFEGPGEKAFRDFLKTNYHQ
PSDDLKLPFNWEAGALFAKVNYYTVLGLANGDERPRWYAGSFFGKEFASGAAKAADPAK
>Mature_539_residues
MNVKLLVSAMLLASTAVPALAEEPVFDPQAVRAHVTFLADDLLEGRDTGSRGYDIAASYVASQFVAMGLKPAGPDGSFYQ
KLTVREARLDGAPKLALNYGGKETVLSDTAQVLVRPSLTDKAVAVDAPLVFAGFGFDRPDLGFDDYKGLDAKGKIVVVLS
GFPKGTPSELGAHLNSEKAVMAMKRGAIAVITVPTTEDSARRPWDKRVAMSDGPAKGWVGADGKAFARATGIRGTATLNP
DAAAPLFAASGKPLARVLAEANRKGGRPRGFALKARASLSFANVWKDVTSENVVAVLPGSDDKLAGEFVGMTAHLDHIGI
HGKGEDTLHNGAMDNASGVATMLEVARAVARDRPRRSVMFAALTGEEGGLIGSDYLARNPLVKGEVVGLVNFDMPVLTYM
FSDVVAFGAENSTMGPVVAEAAKKAGIKLSPDPMPEEGLFTRSDHYRFVQQGVPAVFMMTGFEGPGEKAFRDFLKTNYHQ
PSDDLKLPFNWEAGALFAKVNYYTVLGLANGDERPRWYAGSFFGKEFASGAAKAADPAK

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57120; Mature: 57120

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKLLVSAMLLASTAVPALAEEPVFDPQAVRAHVTFLADDLLEGRDTGSRGYDIAASYV
CCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ASQFVAMGLKPAGPDGSFYQKLTVREARLDGAPKLALNYGGKETVLSDTAQVLVRPSLTD
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHEEECCCCCC
KAVAVDAPLVFAGFGFDRPDLGFDDYKGLDAKGKIVVVLSGFPKGTPSELGAHLNSEKAV
CEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCHHH
MAMKRGAIAVITVPTTEDSARRPWDKRVAMSDGPAKGWVGADGKAFARATGIRGTATLNP
HHHHCCCEEEEEEECCCCHHCCCHHHCEECCCCCCCCCCCCCCCHHHHHCCCCCEEEECC
DAAAPLFAASGKPLARVLAEANRKGGRPRGFALKARASLSFANVWKDVTSENVVAVLPGS
CCCCCEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCC
DDKLAGEFVGMTAHLDHIGIHGKGEDTLHNGAMDNASGVATMLEVARAVARDRPRRSVMF
CCCCCHHHEEEEEEEEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
AALTGEEGGLIGSDYLARNPLVKGEVVGLVNFDMPVLTYMFSDVVAFGAENSTMGPVVAE
EEEECCCCCEECCCHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHH
AAKKAGIKLSPDPMPEEGLFTRSDHYRFVQQGVPAVFMMTGFEGPGEKAFRDFLKTNYHQ
HHHHCCCEECCCCCCCCCCEECCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCC
PSDDLKLPFNWEAGALFAKVNYYTVLGLANGDERPRWYAGSFFGKEFASGAAKAADPAK
CCCCCEECCCCCCCEEEEEEEEEEEEEECCCCCCCCEEECCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNVKLLVSAMLLASTAVPALAEEPVFDPQAVRAHVTFLADDLLEGRDTGSRGYDIAASYV
CCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ASQFVAMGLKPAGPDGSFYQKLTVREARLDGAPKLALNYGGKETVLSDTAQVLVRPSLTD
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHEEECCCCCC
KAVAVDAPLVFAGFGFDRPDLGFDDYKGLDAKGKIVVVLSGFPKGTPSELGAHLNSEKAV
CEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCHHH
MAMKRGAIAVITVPTTEDSARRPWDKRVAMSDGPAKGWVGADGKAFARATGIRGTATLNP
HHHHCCCEEEEEEECCCCHHCCCHHHCEECCCCCCCCCCCCCCCHHHHHCCCCCEEEECC
DAAAPLFAASGKPLARVLAEANRKGGRPRGFALKARASLSFANVWKDVTSENVVAVLPGS
CCCCCEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCC
DDKLAGEFVGMTAHLDHIGIHGKGEDTLHNGAMDNASGVATMLEVARAVARDRPRRSVMF
CCCCCHHHEEEEEEEEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
AALTGEEGGLIGSDYLARNPLVKGEVVGLVNFDMPVLTYMFSDVVAFGAENSTMGPVVAE
EEEECCCCCEECCCHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHH
AAKKAGIKLSPDPMPEEGLFTRSDHYRFVQQGVPAVFMMTGFEGPGEKAFRDFLKTNYHQ
HHHHCCCEECCCCCCCCCCEECCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCC
PSDDLKLPFNWEAGALFAKVNYYTVLGLANGDERPRWYAGSFFGKEFASGAAKAADPAK
CCCCCEECCCCCCCEEEEEEEEEEEEEECCCCCCCCEEECCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA