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The map label for this gene is fdxB [H]

Identifier: 87200809

GI number: 87200809

Start: 3020291

End: 3020623

Strand: Reverse

Name: fdxB [H]

Synonym: Saro_2796

Alternate gene names: 87200809

Gene position: 3020623-3020291 (Counterclockwise)

Preceding gene: 87200810

Following gene: 87200808

Centisome position: 84.81

GC content: 66.37

Gene sequence:

>333_bases
ATGGTCCGTGTCACCTTCGTCAAACCCGATGGCGAGAAAGTGTCCGCCGAAGGCGAGGAAGGGCAGCGGCTGCTCGAAGT
CGGCCAGAACGTGGGCATGCCACTGGAAGGCACCTGCGAAGGACAGATGGCCTGTTCGACCTGCCACGTCGTGATCGATG
CCGCCTGGTTCGACCGGCTGCCGCCCGCCGTGGACGATGAGGAGGACATGCTCGACCTGGCCGCGGGCGTGACCCGCACC
AGCCGCCTGTCGTGCCAGATCGAACTGACCGAGGCGCTGGACGGGCTGGTGGTGCATGTGCCCTCCGAAGTGCAGGACAT
GCAGGGCCGCTGA

Upstream 100 bases:

>100_bases
GCGATCCGACTGGGATTTGGACGCTACACGACGGAAGAGGAACTGGAACAGGCGGCTGCGGCAATCCTTGCCGCCGCGCG
GTCGCAGGGAGTCTGGTAGA

Downstream 100 bases:

>100_bases
TCCTTTGGACGGTTGCGGAACCGCGCGGCCTGTAGTGATCTGCCGGGCAGAGAAACGAGAGGACCAATGGCGGCAATCAA
TCTTCCCCGCGTGATCCGGG

Product: ferredoxin

Products: NA

Alternate protein names: Adrenodoxin-like protein [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVRVTFVKPDGEKVSAEGEEGQRLLEVGQNVGMPLEGTCEGQMACSTCHVVIDAAWFDRLPPAVDDEEDMLDLAAGVTRT
SRLSCQIELTEALDGLVVHVPSEVQDMQGR

Sequences:

>Translated_110_residues
MVRVTFVKPDGEKVSAEGEEGQRLLEVGQNVGMPLEGTCEGQMACSTCHVVIDAAWFDRLPPAVDDEEDMLDLAAGVTRT
SRLSCQIELTEALDGLVVHVPSEVQDMQGR
>Mature_110_residues
MVRVTFVKPDGEKVSAEGEEGQRLLEVGQNVGMPLEGTCEGQMACSTCHVVIDAAWFDRLPPAVDDEEDMLDLAAGVTRT
SRLSCQIELTEALDGLVVHVPSEVQDMQGR

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI4758352, Length=109, Percent_Identity=42.2018348623853, Blast_Score=94, Evalue=3e-20,
Organism=Homo sapiens, GI72534754, Length=107, Percent_Identity=40.1869158878505, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1788874, Length=93, Percent_Identity=39.7849462365591, Blast_Score=65, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17544202, Length=107, Percent_Identity=38.3177570093458, Blast_Score=93, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6325004, Length=109, Percent_Identity=42.2018348623853, Blast_Score=105, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281365644, Length=112, Percent_Identity=45.5357142857143, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24661503, Length=107, Percent_Identity=32.7102803738318, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11916; Mature: 11916

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVTFVKPDGEKVSAEGEEGQRLLEVGQNVGMPLEGTCEGQMACSTCHVVIDAAWFDRL
CEEEEEECCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHHEEEEECHHHHCC
PPAVDDEEDMLDLAAGVTRTSRLSCQIELTEALDGLVVHVPSEVQDMQGR
CCCCCCHHHHHHHHHCCCCCCEEEEEEEEHHCCCCEEEECCCHHHHCCCC
>Mature Secondary Structure
MVRVTFVKPDGEKVSAEGEEGQRLLEVGQNVGMPLEGTCEGQMACSTCHVVIDAAWFDRL
CEEEEEECCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHHEEEEECHHHHCC
PPAVDDEEDMLDLAAGVTRTSRLSCQIELTEALDGLVVHVPSEVQDMQGR
CCCCCCHHHHHHHHHCCCCCCEEEEEEEEHHCCCCEEEECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11319266 [H]