| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200779
Identifier: 87200779
GI number: 87200779
Start: 2985817
End: 2986299
Strand: Reverse
Name: 87200779
Synonym: Saro_2766
Alternate gene names: NA
Gene position: 2986299-2985817 (Counterclockwise)
Preceding gene: 87200780
Following gene: 87200774
Centisome position: 83.85
GC content: 61.9
Gene sequence:
>483_bases ATGACGATGGCAGATGAGACAATCATTCTGAACGTACTTGGCCAATACACCCGCGCGCATGATCGGCGCGATCCCGATGC GATGGCGGCGCTGTTTGCGCCAGAGGCCACAATCGAGATCGTCGACGCCGTCGGCGGCGCGAGCCGGTCGATCAGCAGGC TTGAAGGGCGTGATGCCATTCGCGTTGCGGTTCGCCAGATGATGGCACCTCATGGGTACAGGGCTTGGAGTCAAAACGTC GTCAACGCCCCGATCATCGTCATCGAGGGCGACCATGCGGTCCTCGATGCGCAGTTCATGGTGTTCTCGATCCTTGCAGC CGAAGTTCCGGATGGCGGCTGGCCGACCGGGACGTTCGGAGCGCAAGGCCGCATCGTGCCGATCGAGGCAGGGCAGTACC GCCTGACGTTACGGACGGTGGCTGACGGCTGGGTTATTTCGGCAATGCGGATCGAGCATCGTTTGCCCATGGCCTTCGGC TGA
Upstream 100 bases:
>100_bases GATTGAGCCGGCTCGCTCGCGCTGCCTCAGCCGGGCTTGCCCAAGTTCAAGGTAGCGCGGGTCAACAATCCCCTCGAAGA ATTTCCTGAAGGATGACGTC
Downstream 100 bases:
>100_bases TCCCCCACAGGCCAAACTGCTTCTCCCCACATCCCGCAGAAGCGGTAGCCAGCAGGCCAGACGCATCTTGCGGTTTACCC TGTCAGGTCGTCGCCGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTMADETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNV VNAPIIVIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFGAQGRIVPIEAGQYRLTLRTVADGWVISAMRIEHRLPMAFG
Sequences:
>Translated_160_residues MTMADETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNV VNAPIIVIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFGAQGRIVPIEAGQYRLTLRTVADGWVISAMRIEHRLPMAFG >Mature_159_residues TMADETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNVV NAPIIVIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFGAQGRIVPIEAGQYRLTLRTVADGWVISAMRIEHRLPMAFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17414; Mature: 17283
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMADETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAI CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHCCCHHH RVAVRQMMAPHGYRAWSQNVVNAPIIVIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFG HHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCC AQGRIVPIEAGQYRLTLRTVADGWVISAMRIEHRLPMAFG CCCEEEEEECCCEEEEEEEECCCEEEEHHHHHHCCCCCCC >Mature Secondary Structure TMADETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAI CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHCCCHHH RVAVRQMMAPHGYRAWSQNVVNAPIIVIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFG HHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCC AQGRIVPIEAGQYRLTLRTVADGWVISAMRIEHRLPMAFG CCCEEEEEECCCEEEEEEEECCCEEEEHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA