Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200759

Identifier: 87200759

GI number: 87200759

Start: 2971137

End: 2971727

Strand: Direct

Name: 87200759

Synonym: Saro_2746

Alternate gene names: NA

Gene position: 2971137-2971727 (Clockwise)

Preceding gene: 87200758

Following gene: 87200760

Centisome position: 83.42

GC content: 65.48

Gene sequence:

>591_bases
GTGAACGTCAAGGCGCTCCAAGCCGCGCTCGGCGTTGCGCCGGACGGCATCGCCGGCATTGCGACATTCGGCGCGTTGTT
CCGCAAGCTCGGCGCGATCGACGATGTTGCGGCCCCACTCGCCATCGCGGCCAATGTCCACTTCCCCGCCTACGGCATCA
TGGACAGCGAACTGCGGCTGGCGCACTTCATGGCCCAGCTCTGCCAAGAAAGCGGCTCGTTCCGTTACATGCGGGAGATC
TGGGGGCCAACCGATGCGCAGCGGCGCTACGAAGGCCGCGCGGATCTTGGCAACAGGCAACCCGGCGACGGCAAGCGATA
CCTCGGGCGCGGACCGATCCAGATCACCGGCCGGGCCAACTATCGCAAGTACGGGCGCCGCATCGGCATCGACATCGAGA
ACAGCCCGGAGCTTGCCGAGCATCCATCGATCGGGTTGCACCTCGCGCTCGAATTCTGGCGCGTGAATGACCTGAACGCG
CTTGCCGACGCCGACAACCTGCTGGCGATCACGAAGCGGATCAACGGCGGCACCAACGGGCTAGAGGACCGCAAGGCGCA
TTTGGCCCGCATCAAGGCATGGCTGGCATGA

Upstream 100 bases:

>100_bases
AGCGTCAAGTGCTGCTCACGACGTCCCAAGACAAAAACTACAACGAGATCGAGCGTCGCGTGACGGTTCTCGAGGGCTAC
CACAAGCAGGGAGGTAGCCA

Downstream 100 bases:

>100_bases
CGCCCCGGCAAGCTGGCGGCCTCGTGTTGGATAGCTTCGTCCTGGCGCTGTTGATCGCCCTCGTCCTGCTGGTCGCATCC
TGCGCATGGAGTGCATTGCA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNVKALQAALGVAPDGIAGIATFGALFRKLGAIDDVAAPLAIAANVHFPAYGIMDSELRLAHFMAQLCQESGSFRYMREI
WGPTDAQRRYEGRADLGNRQPGDGKRYLGRGPIQITGRANYRKYGRRIGIDIENSPELAEHPSIGLHLALEFWRVNDLNA
LADADNLLAITKRINGGTNGLEDRKAHLARIKAWLA

Sequences:

>Translated_196_residues
MNVKALQAALGVAPDGIAGIATFGALFRKLGAIDDVAAPLAIAANVHFPAYGIMDSELRLAHFMAQLCQESGSFRYMREI
WGPTDAQRRYEGRADLGNRQPGDGKRYLGRGPIQITGRANYRKYGRRIGIDIENSPELAEHPSIGLHLALEFWRVNDLNA
LADADNLLAITKRINGGTNGLEDRKAHLARIKAWLA
>Mature_196_residues
MNVKALQAALGVAPDGIAGIATFGALFRKLGAIDDVAAPLAIAANVHFPAYGIMDSELRLAHFMAQLCQESGSFRYMREI
WGPTDAQRRYEGRADLGNRQPGDGKRYLGRGPIQITGRANYRKYGRRIGIDIENSPELAEHPSIGLHLALEFWRVNDLNA
LADADNLLAITKRINGGTNGLEDRKAHLARIKAWLA

Specific function: Unknown

COG id: COG3179

COG function: function code R; Predicted chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage D29 and phage L5 gp10 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000726 [H]

Pfam domain/function: PF00182 Glyco_hydro_19 [H]

EC number: NA

Molecular weight: Translated: 21461; Mature: 21461

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKALQAALGVAPDGIAGIATFGALFRKLGAIDDVAAPLAIAANVHFPAYGIMDSELRL
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCHHHHH
AHFMAQLCQESGSFRYMREIWGPTDAQRRYEGRADLGNRQPGDGKRYLGRGPIQITGRAN
HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
YRKYGRRIGIDIENSPELAEHPSIGLHLALEFWRVNDLNALADADNLLAITKRINGGTNG
HHHHCCEECCCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHHCCHHHHHHHHHCCCCCCC
LEDRKAHLARIKAWLA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVKALQAALGVAPDGIAGIATFGALFRKLGAIDDVAAPLAIAANVHFPAYGIMDSELRL
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCHHHHH
AHFMAQLCQESGSFRYMREIWGPTDAQRRYEGRADLGNRQPGDGKRYLGRGPIQITGRAN
HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
YRKYGRRIGIDIENSPELAEHPSIGLHLALEFWRVNDLNALADADNLLAITKRINGGTNG
HHHHCCEECCCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHHCCHHHHHHHHHCCCCCCC
LEDRKAHLARIKAWLA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]