| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200747
Identifier: 87200747
GI number: 87200747
Start: 2959818
End: 2960222
Strand: Direct
Name: 87200747
Synonym: Saro_2734
Alternate gene names: NA
Gene position: 2959818-2960222 (Clockwise)
Preceding gene: 87200746
Following gene: 87200748
Centisome position: 83.1
GC content: 61.73
Gene sequence:
>405_bases ATGGAAACGCGGATCAACCGCCTATTCGCAGGTGAGGAGCGCGCCTTCTGGCTTCCGATGTCGCGCGTCATTGCATTCGA GCGCGAGGCGGGTTGCTCGATTTTTGCCCTGTTCTACGCGCTGGGTGAGAACCTTGGCGCGGCGGAAAGCGGCGACATGG TCCTGATCGGGGCGAGCGACGCACGGCTAAAGCAGTGCCATTCCCTGATCTCCAACGCCCTCATCGGCGCGGGCGAGAGC GAGCAGGAAGCCCGCGACCTTATCCAGACCTATTGCTTCCCAGCGCGACCAGCGATTCATGACGCGGCACTGGCGTTCCA GATCCTCCGCGCTGCGATCTACGGCATCCAGTTGCCGGAAGGCTCAAAAAAAAAGGCCGACGACGCGACGTTGAGCCCTT CGTAA
Upstream 100 bases:
>100_bases GACCGCCGCCAACATGGCGATCACGCGTGAAGGTGGCGGCACTGCCGAAGTTACCCTCGCCAACCACGGCCCATGGACCT GGACGCCGGCCGGGTAATCC
Downstream 100 bases:
>100_bases AGGGTGTCGTCATCGGCAATTGCGGTGAGCTAGGGCTGAACTGGGAGCGCACCTCCCTTTCCATGTACTACGAGGCAATC GCCGCTCGCGATCCGGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues METRINRLFAGEERAFWLPMSRVIAFEREAGCSIFALFYALGENLGAAESGDMVLIGASDARLKQCHSLISNALIGAGES EQEARDLIQTYCFPARPAIHDAALAFQILRAAIYGIQLPEGSKKKADDATLSPS
Sequences:
>Translated_134_residues METRINRLFAGEERAFWLPMSRVIAFEREAGCSIFALFYALGENLGAAESGDMVLIGASDARLKQCHSLISNALIGAGES EQEARDLIQTYCFPARPAIHDAALAFQILRAAIYGIQLPEGSKKKADDATLSPS >Mature_134_residues METRINRLFAGEERAFWLPMSRVIAFEREAGCSIFALFYALGENLGAAESGDMVLIGASDARLKQCHSLISNALIGAGES EQEARDLIQTYCFPARPAIHDAALAFQILRAAIYGIQLPEGSKKKADDATLSPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14535; Mature: 14535
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRINRLFAGEERAFWLPMSRVIAFEREAGCSIFALFYALGENLGAAESGDMVLIGASD CCCHHHHHHCCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC ARLKQCHSLISNALIGAGESEQEARDLIQTYCFPARPAIHDAALAFQILRAAIYGIQLPE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC GSKKKADDATLSPS CCCCCCCCCCCCCC >Mature Secondary Structure METRINRLFAGEERAFWLPMSRVIAFEREAGCSIFALFYALGENLGAAESGDMVLIGASD CCCHHHHHHCCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC ARLKQCHSLISNALIGAGESEQEARDLIQTYCFPARPAIHDAALAFQILRAAIYGIQLPE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC GSKKKADDATLSPS CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA