| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200746
Identifier: 87200746
GI number: 87200746
Start: 2959365
End: 2959814
Strand: Direct
Name: 87200746
Synonym: Saro_2733
Alternate gene names: NA
Gene position: 2959365-2959814 (Clockwise)
Preceding gene: 87200743
Following gene: 87200747
Centisome position: 83.09
GC content: 63.11
Gene sequence:
>450_bases ATGTCCCTTCCCGTCGAAGCCGATTTCGCCCTGATCAAACTCGGCGATGGTGCGACCCCAACCGAAGTGTTCGCCATTGC CTGCGGCCTGCAGGATGTGAACGTCAATCGCACCGCCAACAGCTCGGACCGCTTCGTCCGCGACTGCGCCAAGCCCGGCG AGGTTCCCACCCGCAAGGTTCGCGTGAACGGCAAGCAGCTCGACATCACGGGTTCCGGCCTCATCGACAAGACCCACATC GACACGTTCGAGGAGGCGCTGGGCACCGCGAAGAACTACAAGGTCGAACTATATGCCGACGACGGAACGGACGCTGGCGA TCTAATCGGCACTTTCGCCGGGCCGTTTGTGATGACCGCCGCCAACATGGCGATCACGCGTGAAGGTGGCGGCACTGCCG AAGTTACCCTCGCCAACCACGGCCCATGGACCTGGACGCCGGCCGGGTAA
Upstream 100 bases:
>100_bases TCCCTCGATGGTACGGCCATTAGGCCGCCCTCTGACGGCGGTAACGACCGACCCTGACCCAGCCTAAGCCCTTCGCGATG ATTGCGAGGAGCCCGCGCTG
Downstream 100 bases:
>100_bases TCCATGGAAACGCGGATCAACCGCCTATTCGCAGGTGAGGAGCGCGCCTTCTGGCTTCCGATGTCGCGCGTCATTGCATT CGAGCGCGAGGCGGGTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSLPVEADFALIKLGDGATPTEVFAIACGLQDVNVNRTANSSDRFVRDCAKPGEVPTRKVRVNGKQLDITGSGLIDKTHI DTFEEALGTAKNYKVELYADDGTDAGDLIGTFAGPFVMTAANMAITREGGGTAEVTLANHGPWTWTPAG
Sequences:
>Translated_149_residues MSLPVEADFALIKLGDGATPTEVFAIACGLQDVNVNRTANSSDRFVRDCAKPGEVPTRKVRVNGKQLDITGSGLIDKTHI DTFEEALGTAKNYKVELYADDGTDAGDLIGTFAGPFVMTAANMAITREGGGTAEVTLANHGPWTWTPAG >Mature_148_residues SLPVEADFALIKLGDGATPTEVFAIACGLQDVNVNRTANSSDRFVRDCAKPGEVPTRKVRVNGKQLDITGSGLIDKTHID TFEEALGTAKNYKVELYADDGTDAGDLIGTFAGPFVMTAANMAITREGGGTAEVTLANHGPWTWTPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15687; Mature: 15555
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPVEADFALIKLGDGATPTEVFAIACGLQDVNVNRTANSSDRFVRDCAKPGEVPTRKV CCCCCCCCEEEEEECCCCCHHHEEEEEECCEECCCCCCCCCCHHHHHHHCCCCCCCCEEE RVNGKQLDITGSGLIDKTHIDTFEEALGTAKNYKVELYADDGTDAGDLIGTFAGPFVMTA EECCCEEEEECCCCEECCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEE ANMAITREGGGTAEVTLANHGPWTWTPAG CCEEEEECCCCEEEEEECCCCCEEECCCC >Mature Secondary Structure SLPVEADFALIKLGDGATPTEVFAIACGLQDVNVNRTANSSDRFVRDCAKPGEVPTRKV CCCCCCCEEEEEECCCCCHHHEEEEEECCEECCCCCCCCCCHHHHHHHCCCCCCCCEEE RVNGKQLDITGSGLIDKTHIDTFEEALGTAKNYKVELYADDGTDAGDLIGTFAGPFVMTA EECCCEEEEECCCCEECCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEE ANMAITREGGGTAEVTLANHGPWTWTPAG CCEEEEECCCCEEEEEECCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA