| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200695
Identifier: 87200695
GI number: 87200695
Start: 2921348
End: 2922322
Strand: Reverse
Name: 87200695
Synonym: Saro_2682
Alternate gene names: NA
Gene position: 2922322-2921348 (Counterclockwise)
Preceding gene: 87200699
Following gene: 87200690
Centisome position: 82.05
GC content: 68.51
Gene sequence:
>975_bases ATGAAGAAGGGCTGGATCGCGGGCGCGATTTCACTGGCGGTGCTTTCACTCGCGGTGCTGGATGCGGGCGTGGCCGATGC GCAGATCGGGCAGCGACTGCGCGAGCGCATGGGGGACCGCGCCGGACAGCGCGGGGACGGGCAGCACGGGGACGGGCAGC ACGGGGACAGGCAGGGCGCCAGGACACGGGCTACGGGTGCCAAGACACTCAGCTATGGCGGCGACCCGCTGCAGGTTCTG GACCTGTGGGTGCCAAAGGCGGCAAAGGCGGCGCCGCTGGTGCTGTACGTCCACGGCGGCGGGTGGAAGCGGGGGTCGAA GGACACGGCGATGGGCAACGCCTTGCCCGGCCACCTGGTGCAGCAGGGCTATGCCTTCGCCTCGATCAACTATCGACTGG TGCCCGCTGCGACAGTGGAACAGCAGGCGCAGGACGTGGCGCAGGCACTGGCCTATCTGCTCGGCAAGGCTGGCGCCCTG GGCATCGACCGGTCGCGGGTGGTTATAATGGGGCACAGCGCGGGCGCGCATCTGGTGGCGCTTGTCGGGACCGACGAGCA GTACTTGCGTGGCGCGGGGCTTTCGTTGGCGGACATCGACGGGGTGATCCCGAACGACGGCGCTGCATACGACGTCCCCG CACAAATGAGGCAGGCCGGTCGCATGATGATGGACACCTACAAGCAGGCTTTCGGAACCGATCCCGCGCGGCAGAAGGCA TTGTCTCCGACCTTCCACGCGGCCGCGCCGAACGCGCCGCGCTTCCTGCTGCTGCACGTGCAGCGCAAGGATGGCGTGGC GCAGGCCGAGGCGCTGGGTGCCGCATTGCGGCGGGGCGGGACGAGCGTGGAGTTCGGCAGCTTTCCCGGGACCGGGCTGC AAGGTCACGCCGAAATCAACCGCAAGCTGGGCGAGCCCGACTATGCAGCGACGCCCGTGATGGATCGGTGGCTGAAAGCG ACGTTCGGAAGCTGA
Upstream 100 bases:
>100_bases CGGGAGAGGCGAAGCGATCGATTCAGCGATGGTAAAGCCGGCATTGCGCAACCTTCGTGCTTCGAGGCCGGGCCAGTGGA CGGACAGGGGGGGTACGGAC
Downstream 100 bases:
>100_bases CCAGGGGCAGGCGCCGGTCGGGCCCGACCCTGGGAAGAGCTTATGCCAGCTTTTCCGGTCCGTTCGCGCCGAGCATGTGC GTGCAGCGGAGAGCGTCCGC
Product: esterase/lipase/thioesterase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold-3 Domain Protein; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Hydrolase Domain-Containing Protein; Lipase; Esterase/Lipase; Carboxylesterase; Carboxylesterase Type B; Esterase/Lipase/Thioesterase; Arylformamidase; Para-Nitrobenzyl Esterase; Lipase/Esterase; Alpha/Beta Hydrolase; Esterase; Alpha/Beta Hydrolase Fold Family Protein; Coagulation Factor 5/8 Type Domain Protein; Alpha/Beta Hydrolase Family Protein; Conserved Domain Protein; Peptidase; Carboxylesterase Family Protein; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKKGWIAGAISLAVLSLAVLDAGVADAQIGQRLRERMGDRAGQRGDGQHGDGQHGDRQGARTRATGAKTLSYGGDPLQVL DLWVPKAAKAAPLVLYVHGGGWKRGSKDTAMGNALPGHLVQQGYAFASINYRLVPAATVEQQAQDVAQALAYLLGKAGAL GIDRSRVVIMGHSAGAHLVALVGTDEQYLRGAGLSLADIDGVIPNDGAAYDVPAQMRQAGRMMMDTYKQAFGTDPARQKA LSPTFHAAAPNAPRFLLLHVQRKDGVAQAEALGAALRRGGTSVEFGSFPGTGLQGHAEINRKLGEPDYAATPVMDRWLKA TFGS
Sequences:
>Translated_324_residues MKKGWIAGAISLAVLSLAVLDAGVADAQIGQRLRERMGDRAGQRGDGQHGDGQHGDRQGARTRATGAKTLSYGGDPLQVL DLWVPKAAKAAPLVLYVHGGGWKRGSKDTAMGNALPGHLVQQGYAFASINYRLVPAATVEQQAQDVAQALAYLLGKAGAL GIDRSRVVIMGHSAGAHLVALVGTDEQYLRGAGLSLADIDGVIPNDGAAYDVPAQMRQAGRMMMDTYKQAFGTDPARQKA LSPTFHAAAPNAPRFLLLHVQRKDGVAQAEALGAALRRGGTSVEFGSFPGTGLQGHAEINRKLGEPDYAATPVMDRWLKA TFGS >Mature_324_residues MKKGWIAGAISLAVLSLAVLDAGVADAQIGQRLRERMGDRAGQRGDGQHGDGQHGDRQGARTRATGAKTLSYGGDPLQVL DLWVPKAAKAAPLVLYVHGGGWKRGSKDTAMGNALPGHLVQQGYAFASINYRLVPAATVEQQAQDVAQALAYLLGKAGAL GIDRSRVVIMGHSAGAHLVALVGTDEQYLRGAGLSLADIDGVIPNDGAAYDVPAQMRQAGRMMMDTYKQAFGTDPARQKA LSPTFHAAAPNAPRFLLLHVQRKDGVAQAEALGAALRRGGTSVEFGSFPGTGLQGHAEINRKLGEPDYAATPVMDRWLKA TFGS
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34008; Mature: 34008
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGWIAGAISLAVLSLAVLDAGVADAQIGQRLRERMGDRAGQRGDGQHGDGQHGDRQGA CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RTRATGAKTLSYGGDPLQVLDLWVPKAAKAAPLVLYVHGGGWKRGSKDTAMGNALPGHLV CHHCCCCCEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH QQGYAFASINYRLVPAATVEQQAQDVAQALAYLLGKAGALGIDRSRVVIMGHSAGAHLVA HCCCEEEEECEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEE LVGTDEQYLRGAGLSLADIDGVIPNDGAAYDVPAQMRQAGRMMMDTYKQAFGTDPARQKA EECCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH LSPTFHAAAPNAPRFLLLHVQRKDGVAQAEALGAALRRGGTSVEFGSFPGTGLQGHAEIN CCCCHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH RKLGEPDYAATPVMDRWLKATFGS HHCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKKGWIAGAISLAVLSLAVLDAGVADAQIGQRLRERMGDRAGQRGDGQHGDGQHGDRQGA CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RTRATGAKTLSYGGDPLQVLDLWVPKAAKAAPLVLYVHGGGWKRGSKDTAMGNALPGHLV CHHCCCCCEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH QQGYAFASINYRLVPAATVEQQAQDVAQALAYLLGKAGALGIDRSRVVIMGHSAGAHLVA HCCCEEEEECEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEE LVGTDEQYLRGAGLSLADIDGVIPNDGAAYDVPAQMRQAGRMMMDTYKQAFGTDPARQKA EECCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH LSPTFHAAAPNAPRFLLLHVQRKDGVAQAEALGAALRRGGTSVEFGSFPGTGLQGHAEIN CCCCHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH RKLGEPDYAATPVMDRWLKATFGS HHCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA