| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200689
Identifier: 87200689
GI number: 87200689
Start: 2914673
End: 2914924
Strand: Reverse
Name: 87200689
Synonym: Saro_2676
Alternate gene names: NA
Gene position: 2914924-2914673 (Counterclockwise)
Preceding gene: 87200690
Following gene: 87200688
Centisome position: 81.84
GC content: 68.65
Gene sequence:
>252_bases TTGAGATTTCGGCGGGACATTCTGCTGGTCGGCTTTGGCGCACTCGCTCTGGCGGGCTGTGGCAATCGGGCCGAGCTGAA GCTGGCGCCCGACCAGACGCCGCCGCCGATCCCCTATGGCCGCGAGGTTCAGCCGGGCGCTGACGACCTGCTCAAACCCC CCGCGCAGGCAGCCCCTGCGCGCAACGTCGAGCCGCGTCGCCGCTCGCAGGATCGCGAAGACGATCCTTTCGACCTGCCT CCCGAAGACTGA
Upstream 100 bases:
>100_bases CGAGCGTGGCGGCGCGTTGCAGCCATGGCGGAACCGCGCCGGACGAGGTAAGGAAGCGCGTGGCCCAGGCGCGCGTGGCG CTGGGGCTGGAGGAATCGGC
Downstream 100 bases:
>100_bases GTTTTTTTCCGATGGACCATTTTGAAGTTTCGAACGGCGTGCTCCATGCCGAAGACGTTGCCCTGCCGGTGATCGCGGCC GAAGTCGGCACGCCTGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MRFRRDILLVGFGALALAGCGNRAELKLAPDQTPPPIPYGREVQPGADDLLKPPAQAAPARNVEPRRRSQDREDDPFDLP PED
Sequences:
>Translated_83_residues MRFRRDILLVGFGALALAGCGNRAELKLAPDQTPPPIPYGREVQPGADDLLKPPAQAAPARNVEPRRRSQDREDDPFDLP PED >Mature_83_residues MRFRRDILLVGFGALALAGCGNRAELKLAPDQTPPPIPYGREVQPGADDLLKPPAQAAPARNVEPRRRSQDREDDPFDLP PED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9143; Mature: 9143
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFRRDILLVGFGALALAGCGNRAELKLAPDQTPPPIPYGREVQPGADDLLKPPAQAAPA CCCCCCEEEEEHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC RNVEPRRRSQDREDDPFDLPPED CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFRRDILLVGFGALALAGCGNRAELKLAPDQTPPPIPYGREVQPGADDLLKPPAQAAPA CCCCCCEEEEEHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC RNVEPRRRSQDREDDPFDLPPED CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA