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The map label for this gene is atoS [C]

Identifier: 87200679

GI number: 87200679

Start: 2904622

End: 2905962

Strand: Direct

Name: atoS [C]

Synonym: Saro_2666

Alternate gene names: 87200679

Gene position: 2904622-2905962 (Clockwise)

Preceding gene: 87200678

Following gene: 87200683

Centisome position: 81.55

GC content: 66.37

Gene sequence:

>1341_bases
TTGCTGGCCGAAGCGCATCTCTCTGCCATAATACAATCATCTGATGACGCGATCATAAGCAAGGACCTCTCGGGCACGAT
CCTGAGCTGGAACCCCGCCGCCACGCGCATCTTCGGATTCTCCGAAGCGGAGATGATCGGCCATTCCGTCCGCCGCCTCA
TTCCGGCGGAGCGGCAGGCGGAAGAGGACGACATCCTCGCGCGCATCGCCCGTGGCGAGCGGGTGAAGAGCTTCGACACG
ATGCGGCAGCGAAAGGACGGGGTCCAGATCGCGGTCTCGATCACCGTCTCGCCGGTCTACGACAAGGCGGGCCGCATCGT
CGGGGCCAGCAAGATTGCCCGCGACATCACGTCGCGCGAGGAAGGCCAGCGAGCCCTGCGCGAGAGCGAGGCCCGCTTTC
GCATGCTGGCCGACAACATCTCGCAGCTCACTTGGGTGGCCGACCGCACGGGCGCCATCGGCTGGTATAACAAACGCTGG
TACGACTACACCGGGGTGCCGCACGGTTCGACCGATGGCTGGGGCTGGGATCGCGTGCACCATCCCGACCATCTCGAACG
GGTGCGCGAGCATTTTGCCGAGAGCATTGCTGCGGGACGCGAATGGGAGGACACCTTCCCGCTTCTCGGCCGCGACGGGA
CCTACCGCTGGTTCCTGTCGCGCGCGAAGCCGATCCGGGGCGAGGATGGCGGGATCGTCTACTGGTTCGGCACCAATACC
GACGTGACCGAGATGCTCGAGAAGGAAGAGCAGATCCGCGTCCTGCTGATGGAAGTGAACCACCGCTCGAAGAACCTGCT
CTCGGTCGTCCAGGCGCTGGCCCGGCGGTCTGGCGGAGGCGATCCCGAGTTCCTGCGCCGTTTCGAGAACCGTCTCGCCA
GCCTTTCTGCCAACCAGGACCTGCTGGTGCGGCGCGGTTGGTCGACGATCATGATGGACGAGCTGGCCGACGCCCAGCTC
GCGATCCTCGGCCGCGACAGCCGCGAACAGGTCCTGACGCAAGGCCTGTCCCTGGCCCTGAGCCCCCGCAGCGCCGAGAT
CATCGGCATGGCGCTGCACGAGCTGGCAACCAACGCGCTCAAGTACGGGGCGCTCAGCGTGCCGACCGGCCGCGTTTCGC
TGTCATGGGAGGAGACACCGGACGGGCATTTCCAGATCGACTGGCGCGAAAGCGGCGGCCCAGCCGTGCGCGACCCGAAG
CAGCACGGCTTCGGGACAACGCTCATCCGCCATATTCCGGCGCGCAGCCTCCACGCAGACGTCACGCTCGACTACGCGCC
CGCAGGCCTGCGCTGGCAATTGCGCTGCACCAGCGCGACGGCGCGGACCCTTTCGAGTTAG

Upstream 100 bases:

>100_bases
GGAAAGCCGGGCTCTAACCTCAGGACGCAATGCGTTTGCATCGTGGCAGACTTGGCCTAAAGTGAAAAACGAGGGTGGGG
TCGCAACGGAGCAATCAGCA

Downstream 100 bases:

>100_bases
CCGGCCTTCCCGGCGCCTTCGAGGGCGGCAATTCGCGCCTTGAGCGCCTCGACTTCCTCGCGCGCGGCGGCGGCCATGTC
CTTGACCGCGTCAAATTCCT

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLAEAHLSAIIQSSDDAIISKDLSGTILSWNPAATRIFGFSEAEMIGHSVRRLIPAERQAEEDDILARIARGERVKSFDT
MRQRKDGVQIAVSITVSPVYDKAGRIVGASKIARDITSREEGQRALRESEARFRMLADNISQLTWVADRTGAIGWYNKRW
YDYTGVPHGSTDGWGWDRVHHPDHLERVREHFAESIAAGREWEDTFPLLGRDGTYRWFLSRAKPIRGEDGGIVYWFGTNT
DVTEMLEKEEQIRVLLMEVNHRSKNLLSVVQALARRSGGGDPEFLRRFENRLASLSANQDLLVRRGWSTIMMDELADAQL
AILGRDSREQVLTQGLSLALSPRSAEIIGMALHELATNALKYGALSVPTGRVSLSWEETPDGHFQIDWRESGGPAVRDPK
QHGFGTTLIRHIPARSLHADVTLDYAPAGLRWQLRCTSATARTLSS

Sequences:

>Translated_446_residues
MLAEAHLSAIIQSSDDAIISKDLSGTILSWNPAATRIFGFSEAEMIGHSVRRLIPAERQAEEDDILARIARGERVKSFDT
MRQRKDGVQIAVSITVSPVYDKAGRIVGASKIARDITSREEGQRALRESEARFRMLADNISQLTWVADRTGAIGWYNKRW
YDYTGVPHGSTDGWGWDRVHHPDHLERVREHFAESIAAGREWEDTFPLLGRDGTYRWFLSRAKPIRGEDGGIVYWFGTNT
DVTEMLEKEEQIRVLLMEVNHRSKNLLSVVQALARRSGGGDPEFLRRFENRLASLSANQDLLVRRGWSTIMMDELADAQL
AILGRDSREQVLTQGLSLALSPRSAEIIGMALHELATNALKYGALSVPTGRVSLSWEETPDGHFQIDWRESGGPAVRDPK
QHGFGTTLIRHIPARSLHADVTLDYAPAGLRWQLRCTSATARTLSS
>Mature_446_residues
MLAEAHLSAIIQSSDDAIISKDLSGTILSWNPAATRIFGFSEAEMIGHSVRRLIPAERQAEEDDILARIARGERVKSFDT
MRQRKDGVQIAVSITVSPVYDKAGRIVGASKIARDITSREEGQRALRESEARFRMLADNISQLTWVADRTGAIGWYNKRW
YDYTGVPHGSTDGWGWDRVHHPDHLERVREHFAESIAAGREWEDTFPLLGRDGTYRWFLSRAKPIRGEDGGIVYWFGTNT
DVTEMLEKEEQIRVLLMEVNHRSKNLLSVVQALARRSGGGDPEFLRRFENRLASLSANQDLLVRRGWSTIMMDELADAQL
AILGRDSREQVLTQGLSLALSPRSAEIIGMALHELATNALKYGALSVPTGRVSLSWEETPDGHFQIDWRESGGPAVRDPK
QHGFGTTLIRHIPARSLHADVTLDYAPAGLRWQLRCTSATARTLSS

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49963; Mature: 49963

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEAHLSAIIQSSDDAIISKDLSGTILSWNPAATRIFGFSEAEMIGHSVRRLIPAERQA
CCCHHHHHHHHHCCCCCEEECCCCCCEEECCCHHHEEECCCHHHHHHHHHHHHCCCCCCC
EEDDILARIARGERVKSFDTMRQRKDGVQIAVSITVSPVYDKAGRIVGASKIARDITSRE
CHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEEEECHHCCCCEECHHHHHHHHHHHH
EGQRALRESEARFRMLADNISQLTWVADRTGAIGWYNKRWYDYTGVPHGSTDGWGWDRVH
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
HPDHLERVREHFAESIAAGREWEDTFPLLGRDGTYRWFLSRAKPIRGEDGGIVYWFGTNT
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCC
DVTEMLEKEEQIRVLLMEVNHRSKNLLSVVQALARRSGGGDPEFLRRFENRLASLSANQD
CHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
LLVRRGWSTIMMDELADAQLAILGRDSREQVLTQGLSLALSPRSAEIIGMALHELATNAL
EEEECCCCHHHHHHHCCCEEEEECCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHH
KYGALSVPTGRVSLSWEETPDGHFQIDWRESGGPAVRDPKQHGFGTTLIRHIPARSLHAD
HCCCEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHCCCHHHHHHHCCCCCCCCC
VTLDYAPAGLRWQLRCTSATARTLSS
EEEEECCCCCEEEEEECCHHHHHCCC
>Mature Secondary Structure
MLAEAHLSAIIQSSDDAIISKDLSGTILSWNPAATRIFGFSEAEMIGHSVRRLIPAERQA
CCCHHHHHHHHHCCCCCEEECCCCCCEEECCCHHHEEECCCHHHHHHHHHHHHCCCCCCC
EEDDILARIARGERVKSFDTMRQRKDGVQIAVSITVSPVYDKAGRIVGASKIARDITSRE
CHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEEEECHHCCCCEECHHHHHHHHHHHH
EGQRALRESEARFRMLADNISQLTWVADRTGAIGWYNKRWYDYTGVPHGSTDGWGWDRVH
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
HPDHLERVREHFAESIAAGREWEDTFPLLGRDGTYRWFLSRAKPIRGEDGGIVYWFGTNT
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCC
DVTEMLEKEEQIRVLLMEVNHRSKNLLSVVQALARRSGGGDPEFLRRFENRLASLSANQD
CHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
LLVRRGWSTIMMDELADAQLAILGRDSREQVLTQGLSLALSPRSAEIIGMALHELATNAL
EEEECCCCHHHHHHHCCCEEEEECCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHH
KYGALSVPTGRVSLSWEETPDGHFQIDWRESGGPAVRDPKQHGFGTTLIRHIPARSLHAD
HCCCEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHCCCHHHHHHHCCCCCCCCC
VTLDYAPAGLRWQLRCTSATARTLSS
EEEEECCCCCEEEEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA