Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200662

Identifier: 87200662

GI number: 87200662

Start: 2885150

End: 2886268

Strand: Reverse

Name: 87200662

Synonym: Saro_2649

Alternate gene names: NA

Gene position: 2886268-2885150 (Counterclockwise)

Preceding gene: 87200663

Following gene: 87200661

Centisome position: 81.04

GC content: 68.54

Gene sequence:

>1119_bases
GTGGCACCTGCCGTTTCCCCTGCTGACGGTCTGATCGTCCTGCTGCCAGCCTCGCCCGACGAGGCGTGGCGCTGGTGGCG
CGTGGAAGCCGATGGCATCGGTGCGGAACAGTTCCTCGACGGGCCGCTGGGCAATGCGCCGTGGGGCGAGACCGGCTCCG
TGACGGTGCTGGTTCCTGCGGCGGATGCGCCGGTCATCGACAAGCCGATGTCCGCCATGCCCGTTGCCCAGGCGCTTGCT
GCGGAAAGGCTGGCGCTGGCTCAGGCGGGGCTTGCGGTAGATCATCACGTCGCCGTTGCCGAGCATCGCGGTCGGCTGCT
TTCGGCAACTGTCTCAGCCGCCGACATGGACCGCTGGATCGCCGATTTGTCCGGTCTCGGGCTCGATCCCGAATCCATCA
TACCGGCTGGACTGGTCCTGCCGCGCGATGATGACCGGCTGGTCCTTGGCACGCTTGGCGGGCAGCTTCTGGCGCGGACA
CCCGGGGTGGCGTTCGCTGGCGAAGAAGCGTTGGTGATGACGCTTGGCGCGGGACTTGAGCAGGTTCTGACCGAGGAAGA
GCGGATCGCGCAGAGCCTTGCCGCGATCCATGCCGCGCCGCCGCTGAACCTGCGGCAGGGAGCCTATGCGGCCAAGCGGG
TTTCGGTCTTTCGCACCGCCGACTGGCTGGGGCTGGCGCGAATGGCGGCCATTGCCGCGCTTCTCGGGCTGCTGCTCATG
CTGGTGTGGATCGTGAAGTGGAACATCGACAGCTCGGCGCTGGAAAGCCGTGCGCTGGAAATGGCGCAGGCCCGCTTTCC
GGCCGCGACCGATATCGACACGGCCGAACGCCTGTTGAACGCGGAACTCGCCCGGCGCGGGCAGGGCGGAGCGAGCTTTG
CCGCGCCTGCCGCAGCTCTGCTTGAAGCGATGCGGGCGGTGCCGGCAGTCAGGCTGCGCGACCTGGGCTATGCGCCGGAC
GGCACGCTGCGCTTCACTGCCGCCGCGCCGCGTGCCGATGATGTGAACGCGGTGCTGATCGCCTTGCAGAACGAGGGTTG
GAAAGTGACAGTGCCACCCGCGCTTGCGCCCGATCCGACCGGCGCGACCGTCGCCGCGATCACCGTGAGGGCGCCATGA

Upstream 100 bases:

>100_bases
CGGGAAGCCGTTCGAGATCTTCTCGCTTGGCGCCGACGGCCAGCCGGGCGGCAGCGAGCTGAACGCCGACATCTACGCTG
GGCAAAAGTGATCCGGGTAC

Downstream 100 bases:

>100_bases
GGAGCGGTTTGAACGTGTGGTACGGCGGCCTGACGGCGCGCGAGCGGGGCCTTGTCAGCGTCGCTGGCGGGCTGGTGGCG
TCGATCGTCCTTGTCTACGG

Product: general secretion pathway L

Products: NA

Alternate protein names: Type II Secretory Pathway Component PulL

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MAPAVSPADGLIVLLPASPDEAWRWWRVEADGIGAEQFLDGPLGNAPWGETGSVTVLVPAADAPVIDKPMSAMPVAQALA
AERLALAQAGLAVDHHVAVAEHRGRLLSATVSAADMDRWIADLSGLGLDPESIIPAGLVLPRDDDRLVLGTLGGQLLART
PGVAFAGEEALVMTLGAGLEQVLTEEERIAQSLAAIHAAPPLNLRQGAYAAKRVSVFRTADWLGLARMAAIAALLGLLLM
LVWIVKWNIDSSALESRALEMAQARFPAATDIDTAERLLNAELARRGQGGASFAAPAAALLEAMRAVPAVRLRDLGYAPD
GTLRFTAAAPRADDVNAVLIALQNEGWKVTVPPALAPDPTGATVAAITVRAP

Sequences:

>Translated_372_residues
MAPAVSPADGLIVLLPASPDEAWRWWRVEADGIGAEQFLDGPLGNAPWGETGSVTVLVPAADAPVIDKPMSAMPVAQALA
AERLALAQAGLAVDHHVAVAEHRGRLLSATVSAADMDRWIADLSGLGLDPESIIPAGLVLPRDDDRLVLGTLGGQLLART
PGVAFAGEEALVMTLGAGLEQVLTEEERIAQSLAAIHAAPPLNLRQGAYAAKRVSVFRTADWLGLARMAAIAALLGLLLM
LVWIVKWNIDSSALESRALEMAQARFPAATDIDTAERLLNAELARRGQGGASFAAPAAALLEAMRAVPAVRLRDLGYAPD
GTLRFTAAAPRADDVNAVLIALQNEGWKVTVPPALAPDPTGATVAAITVRAP
>Mature_371_residues
APAVSPADGLIVLLPASPDEAWRWWRVEADGIGAEQFLDGPLGNAPWGETGSVTVLVPAADAPVIDKPMSAMPVAQALAA
ERLALAQAGLAVDHHVAVAEHRGRLLSATVSAADMDRWIADLSGLGLDPESIIPAGLVLPRDDDRLVLGTLGGQLLARTP
GVAFAGEEALVMTLGAGLEQVLTEEERIAQSLAAIHAAPPLNLRQGAYAAKRVSVFRTADWLGLARMAAIAALLGLLLML
VWIVKWNIDSSALESRALEMAQARFPAATDIDTAERLLNAELARRGQGGASFAAPAAALLEAMRAVPAVRLRDLGYAPDG
TLRFTAAAPRADDVNAVLIALQNEGWKVTVPPALAPDPTGATVAAITVRAP

Specific function: Unknown

COG id: COG3297

COG function: function code U; Type II secretory pathway, component PulL

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38723; Mature: 38592

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPAVSPADGLIVLLPASPDEAWRWWRVEADGIGAEQFLDGPLGNAPWGETGSVTVLVPA
CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEC
ADAPVIDKPMSAMPVAQALAAERLALAQAGLAVDHHVAVAEHRGRLLSATVSAADMDRWI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHH
ADLSGLGLDPESIIPAGLVLPRDDDRLVLGTLGGQLLARTPGVAFAGEEALVMTLGAGLE
HHHHCCCCCHHHHCCCCEEECCCCCCEEEEECCCHHHHCCCCCEECCCCEEEEEHHCCHH
QVLTEEERIAQSLAAIHAAPPLNLRQGAYAAKRVSVFRTADWLGLARMAAIAALLGLLLM
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVWIVKWNIDSSALESRALEMAQARFPAATDIDTAERLLNAELARRGQGGASFAAPAAAL
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LEAMRAVPAVRLRDLGYAPDGTLRFTAAAPRADDVNAVLIALQNEGWKVTVPPALAPDPT
HHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCC
GATVAAITVRAP
CCEEEEEEEECC
>Mature Secondary Structure 
APAVSPADGLIVLLPASPDEAWRWWRVEADGIGAEQFLDGPLGNAPWGETGSVTVLVPA
CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEC
ADAPVIDKPMSAMPVAQALAAERLALAQAGLAVDHHVAVAEHRGRLLSATVSAADMDRWI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHH
ADLSGLGLDPESIIPAGLVLPRDDDRLVLGTLGGQLLARTPGVAFAGEEALVMTLGAGLE
HHHHCCCCCHHHHCCCCEEECCCCCCEEEEECCCHHHHCCCCCEECCCCEEEEEHHCCHH
QVLTEEERIAQSLAAIHAAPPLNLRQGAYAAKRVSVFRTADWLGLARMAAIAALLGLLLM
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVWIVKWNIDSSALESRALEMAQARFPAATDIDTAERLLNAELARRGQGGASFAAPAAAL
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LEAMRAVPAVRLRDLGYAPDGTLRFTAAAPRADDVNAVLIALQNEGWKVTVPPALAPDPT
HHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCC
GATVAAITVRAP
CCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA