Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200660

Identifier: 87200660

GI number: 87200660

Start: 2883943

End: 2884677

Strand: Reverse

Name: 87200660

Synonym: Saro_2647

Alternate gene names: NA

Gene position: 2884677-2883943 (Counterclockwise)

Preceding gene: 87200661

Following gene: 87200657

Centisome position: 80.99

GC content: 66.8

Gene sequence:

>735_bases
GTGATCGGGCGATGGATCTTTGTTCGCGAGCGGGTCTTCTCGCGGCGCGGCAGGATTGCGCTCGCGATGCTTGTCGCCCT
GGCGCTCGTCGTACTTCTCCCGCTGCGGCTGGTGCTTGGGTTGGTCGCCCCGGAAGGCGTCACGGCGCGATCCGTCGAGG
GGCCGGTCTGGAGCGGACGAATTGCGGAACTCAGGGCCGGACCGTTGCCAATCGGCACTGTCGATGCCGGAGCCGATGCG
CTGCCGCTTATCCTCGGCAGGGTGGGCTTCCGGCTTTCACGCGAAGGTGCAACCCCGTTTTCGGCGAAGGCATCGCTGGG
TCTTGGCGGTTACCGGCTCGCCGATGTGAACGGGACGGTCGCCTTGCCCGACGGACTGGGCACCCTTCCCGTGACCCAGA
TCGGATTTGGCGACTTCAATTTGCGAATTGCCGATGGCAGTTGCGTCGATGCGGGCGGCTCGATGAGCCTTACGCTGGCG
CCGCCCGGGTCGCTGCTGCCCGGTACTATCGCGCTGTCGGGCAAGGCTCGATGCCAGCGAGGGGCGCTGGTCGTGCCGAT
GCAGGGACCGGAGGGAATGGAACGCTTCACCCTTCGCTTGAACGCTGACGGCCGTTGGGAGGGAGACCTGGTGTTGATGG
GCCTTCCCGCCGAAACGGCAGGGCCGCTGATGCAGGCAGGATTTGCCGCTCGTCCCGGTGGCGGTCTGGGCCTCAGGACG
AGCGGCGCCTTCTGA

Upstream 100 bases:

>100_bases
ACGGGCTGATGGCGCAGGGACTGGCGGTCGAGCAACTGACCATGACACCCGCGCCGGACGGCAGCGTCTCGGTCAACGTC
ACCTTGCGACGGAGCGGATC

Downstream 100 bases:

>100_bases
AATTCAGGCCAGCGTCTGGGTAAGGAACCACACGCGCTGCTGAGCCTGGTCGGTCCAGTCGTCGGCCATGCCTTCGGTCG
CGTTGTCGCCGGCCTCGCCA

Product: type II secretion system protein N

Products: NA

Alternate protein names: Type II Secretory Pathway Component PulN

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MIGRWIFVRERVFSRRGRIALAMLVALALVVLLPLRLVLGLVAPEGVTARSVEGPVWSGRIAELRAGPLPIGTVDAGADA
LPLILGRVGFRLSREGATPFSAKASLGLGGYRLADVNGTVALPDGLGTLPVTQIGFGDFNLRIADGSCVDAGGSMSLTLA
PPGSLLPGTIALSGKARCQRGALVVPMQGPEGMERFTLRLNADGRWEGDLVLMGLPAETAGPLMQAGFAARPGGGLGLRT
SGAF

Sequences:

>Translated_244_residues
MIGRWIFVRERVFSRRGRIALAMLVALALVVLLPLRLVLGLVAPEGVTARSVEGPVWSGRIAELRAGPLPIGTVDAGADA
LPLILGRVGFRLSREGATPFSAKASLGLGGYRLADVNGTVALPDGLGTLPVTQIGFGDFNLRIADGSCVDAGGSMSLTLA
PPGSLLPGTIALSGKARCQRGALVVPMQGPEGMERFTLRLNADGRWEGDLVLMGLPAETAGPLMQAGFAARPGGGLGLRT
SGAF
>Mature_244_residues
MIGRWIFVRERVFSRRGRIALAMLVALALVVLLPLRLVLGLVAPEGVTARSVEGPVWSGRIAELRAGPLPIGTVDAGADA
LPLILGRVGFRLSREGATPFSAKASLGLGGYRLADVNGTVALPDGLGTLPVTQIGFGDFNLRIADGSCVDAGGSMSLTLA
PPGSLLPGTIALSGKARCQRGALVVPMQGPEGMERFTLRLNADGRWEGDLVLMGLPAETAGPLMQAGFAARPGGGLGLRT
SGAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25118; Mature: 25118

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRWIFVRERVFSRRGRIALAMLVALALVVLLPLRLVLGLVAPEGVTARSVEGPVWSGR
CCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
IAELRAGPLPIGTVDAGADALPLILGRVGFRLSREGATPFSAKASLGLGGYRLADVNGTV
EHEEECCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEEEECCCCE
ALPDGLGTLPVTQIGFGDFNLRIADGSCVDAGGSMSLTLAPPGSLLPGTIALSGKARCQR
ECCCCCCCCCEEEECCCCEEEEEECCCEECCCCCEEEEECCCCCCCCCEEEECCCCCCCC
GALVVPMQGPEGMERFTLRLNADGRWEGDLVLMGLPAETAGPLMQAGFAARPGGGLGLRT
CCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHCCHHHHCCCCCCCCCCCCCCC
SGAF
CCCC
>Mature Secondary Structure
MIGRWIFVRERVFSRRGRIALAMLVALALVVLLPLRLVLGLVAPEGVTARSVEGPVWSGR
CCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
IAELRAGPLPIGTVDAGADALPLILGRVGFRLSREGATPFSAKASLGLGGYRLADVNGTV
EHEEECCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEEEECCCCE
ALPDGLGTLPVTQIGFGDFNLRIADGSCVDAGGSMSLTLAPPGSLLPGTIALSGKARCQR
ECCCCCCCCCEEEECCCCEEEEEECCCEECCCCCEEEEECCCCCCCCCEEEECCCCCCCC
GALVVPMQGPEGMERFTLRLNADGRWEGDLVLMGLPAETAGPLMQAGFAARPGGGLGLRT
CCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHCCHHHHCCCCCCCCCCCCCCC
SGAF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA