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The map label for this gene is yjbI [H]

Identifier: 87200627

GI number: 87200627

Start: 2828193

End: 2828594

Strand: Direct

Name: yjbI [H]

Synonym: Saro_2614

Alternate gene names: 87200627

Gene position: 2828193-2828594 (Clockwise)

Preceding gene: 87200626

Following gene: 87200638

Centisome position: 79.41

GC content: 67.91

Gene sequence:

>402_bases
ATGACCGTGCCCGGCACCCCTTACGAAGCCTTCGGCGGCGAGGCCGCGATCCGCGCGCTGTGCGGCCGGTTCTATAGCCT
GATGGATGAACTGCCGGGCGCGGCGGCCTGCCGTGCGGTGCACCCGCCCTCGCTCGAGCGGGCGGAGGAAAGGTTGTTCG
AGTACCTGACCGGATGGCTCGGCGGCCCGCCGCTCTACACCGACAAGTATGGCCACCCGCGACTGAGGATGCGGCACTTC
ATCGCGCCCATCGGCCGGGAGGAAGTGGAAGGCTGGCTACTGTGCTTCCGCCAGGCCTGGAGCGAGACCATACCGGCATC
ACCGCTGGCCGACGCGATCATGGAAAAGGTCGAGGGGCTGGCCTGGCACATGGGCAACAAGCCCGACATCGCCGGTTCCT
GA

Upstream 100 bases:

>100_bases
GCCTCCACGACTTCATGCAGACCTGAAGAAGGACCGCGCGCCGCGTACTGCTGCCCGAGGTTGTCCGCGTCAGTGCCAAC
GGCTAGGGGCAGTGCCTGCA

Downstream 100 bases:

>100_bases
AAACAAGAGCCCTCCCTTCCGCAAGGGAAAGGAGGGCAGTCGTCATGCTCGCAGGAGCGTGGGATCAGAAGGCAACGGTG
GCCGAAACAACGACGCGCGA

Product: globin

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MTVPGTPYEAFGGEAAIRALCGRFYSLMDELPGAAACRAVHPPSLERAEERLFEYLTGWLGGPPLYTDKYGHPRLRMRHF
IAPIGREEVEGWLLCFRQAWSETIPASPLADAIMEKVEGLAWHMGNKPDIAGS

Sequences:

>Translated_133_residues
MTVPGTPYEAFGGEAAIRALCGRFYSLMDELPGAAACRAVHPPSLERAEERLFEYLTGWLGGPPLYTDKYGHPRLRMRHF
IAPIGREEVEGWLLCFRQAWSETIPASPLADAIMEKVEGLAWHMGNKPDIAGS
>Mature_132_residues
TVPGTPYEAFGGEAAIRALCGRFYSLMDELPGAAACRAVHPPSLERAEERLFEYLTGWLGGPPLYTDKYGHPRLRMRHFI
APIGREEVEGWLLCFRQAWSETIPASPLADAIMEKVEGLAWHMGNKPDIAGS

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 14745; Mature: 14614

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPGTPYEAFGGEAAIRALCGRFYSLMDELPGAAACRAVHPPSLERAEERLFEYLTGWL
CCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC
GGPPLYTDKYGHPRLRMRHFIAPIGREEVEGWLLCFRQAWSETIPASPLADAIMEKVEGL
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AWHMGNKPDIAGS
HHHCCCCCCCCCC
>Mature Secondary Structure 
TVPGTPYEAFGGEAAIRALCGRFYSLMDELPGAAACRAVHPPSLERAEERLFEYLTGWL
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHC
GGPPLYTDKYGHPRLRMRHFIAPIGREEVEGWLLCFRQAWSETIPASPLADAIMEKVEGL
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AWHMGNKPDIAGS
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]